RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 FILIP1LQ4L180 1135 aa10.13□□□□□ -0.79
TOP1-201ENST00000361337 KANK3Q6NY19 840 aa10.13□□□□□ -0.79
TOP1-201ENST00000361337 TAX1BP1Q86VP1 789 aa10.13□□□□□ -0.79
TOP1-201ENST00000361337 IRF2BP1Q8IU81 584 aa10.13□□□□□ -0.79
TOP1-201ENST00000361337 CPXCR1Q8N123 301 aa10.13□□□□□ -0.79
TOP1-201ENST00000361337 WASF1Q92558 559 aa10.13□□□□□ -0.79
TOP1-201ENST00000361337 LACRTQ9GZZ8 138 aa10.13□□□□□ -0.79
TOP1-201ENST00000361337 POLD4Q9HCU8 107 aa10.13□□□□□ -0.79
TOP1-201ENST00000361337 SEC63Q9UGP8 760 aaKnown RBP10.13□□□□□ -0.79
TOP1-201ENST00000361337 EPN1Q9Y6I3 576 aaPredicted RBP10.13□□□□□ -0.79
TOP1-201ENST00000361337 DOT1LQ8TEK3 1739 aa10.13□□□□□ -0.79
TOP1-201ENST00000361337 AGPSO00116 658 aa10.13□□□□□ -0.79
TOP1-201ENST00000361337 HMGB2P26583 209 aaKnown RBP10.13□□□□□ -0.79
TOP1-201ENST00000361337 GCKP35557 465 aa10.13□□□□□ -0.79
TOP1-201ENST00000361337 KLK7P49862 253 aa10.13□□□□□ -0.79
TOP1-201ENST00000361337 USP14P54578 494 aa10.13□□□□□ -0.79
TOP1-201ENST00000361337 DALRD3Q5D0E6 543 aaKnown RBP10.13□□□□□ -0.79
TOP1-201ENST00000361337 CYP26C1Q6V0L0 522 aa10.13□□□□□ -0.79
TOP1-201ENST00000361337 CNNM2Q9H8M5 875 aa10.13□□□□□ -0.79
TOP1-201ENST00000361337 PCDHAC2Q9Y5I4 1007 aa10.13□□□□□ -0.79
TOP1-201ENST00000361337 CCDC196A0A1B0GTZ2 297 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 GOLGA6L7A0A1B0GV03 622 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 KCNJ18B7U540 433 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 ECE2O60344 883 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 MAGEA9P43362 315 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 UBXN1Q04323 297 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 PTGDRQ13258 359 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 KCNJ12Q14500 433 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 TCP11X2Q5H9J9 407 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 WDR93Q6P2C0 686 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 WDR59Q6PJI9 974 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 NELFBQ8WX92 580 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 GPKOWQ92917 476 aaPredicted RBP eCLIP10.12□□□□□ -0.794e-7■■□□□ 11.7
TOP1-201ENST00000361337 DISP2A7MBM2 1401 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 SLC16A2P36021 539 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 CORO7P57737 925 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 NPY5RQ15761 445 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 HDAC7Q8WUI4 952 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 GSDMAQ96QA5 445 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 CTAGE1Q96RT6 745 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 CXorf56Q9H5V9 222 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 PIM2Q9P1W9 311 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 LIMA1Q9UHB6 759 aaKnown RBP10.12□□□□□ -0.79
TOP1-201ENST00000361337 SUFUQ9UMX1 484 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 ITIH6Q6UXX5 1313 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 KIRREL3Q8IZU9 778 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 AFAP1L1Q8TED9 768 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 DYDC1Q8WWB3 177 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 HOMER2Q9NSB8 354 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 TCEAL9Q9UHQ7 104 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 CEP83Q9Y592 693 aa10.12□□□□□ -0.79
TOP1-201ENST00000361337 PRCPP42785 496 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 C2orf54Q08AI8 447 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 USH1GQ495M9 461 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 CCDC148Q8NFR7 591 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 SMCR8Q8TEV9 937 aaPredicted RBP10.11□□□□□ -0.79
TOP1-201ENST00000361337 RRP36Q96EU6 259 aaKnown RBP10.11□□□□□ -0.79
TOP1-201ENST00000361337 SMARCAL1Q9NZC9 954 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 PKD2L1Q9P0L9 805 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 CEP131Q9UPN4 1083 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 LRRC10BA6NIK2 292 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 CCDC172P0C7W6 258 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 SRGNP10124 158 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 CYP27A1Q02318 531 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 MKRN3Q13064 507 aaKnown RBP10.11□□□□□ -0.79
TOP1-201ENST00000361337 PLS1Q14651 629 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 ALX1Q15699 326 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 MSL3Q8N5Y2 521 aaKnown RBP10.11□□□□□ -0.79
TOP1-201ENST00000361337 RASGRP4Q8TDF6 673 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 NSUN4Q96CB9 384 aaKnown RBP10.11□□□□□ -0.79
TOP1-201ENST00000361337 PHF20Q9BVI0 1012 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 AGPAT5Q9NUQ2 364 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 DDX60LQ5H9U9 1706 aaKnown RBP10.11□□□□□ -0.79
TOP1-201ENST00000361337 CCDC194A0A1B0GVG4 234 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 FUT2Q10981 343 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 PAK1Q13153 545 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 CCDC122Q5T0U0 273 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 PDXDC2PQ6P474 469 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 USP17L2Q6R6M4 530 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 STAG1Q8WVM7 1258 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 CSRNP1Q96S65 589 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 MED4Q9NPJ6 270 aa10.11□□□□□ -0.79
TOP1-201ENST00000361337 MCM7P33993 719 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 ZNF76P36508 570 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 AARSP49588 968 aaKnown RBP eCLIP10.1□□□□□ -0.79
TOP1-201ENST00000361337 COG1Q8WTW3 980 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 TBC1D22AQ8WUA7 517 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 CCDC51Q96ER9 411 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 DCP1AQ9NPI6 582 aaPredicted RBP10.1□□□□□ -0.79
TOP1-201ENST00000361337 FOCADQ5VW36 1801 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 NRXN2Q9P2S2 1712 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 MACROD2A1Z1Q3 448 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 PP2D1A8MPX8 630 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 PSMD14O00487 310 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 NDUFAB1O14561 156 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 KRT2P35908 639 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 NAPAP54920 295 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 STIM1Q13586 685 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 SEC23AQ15436 765 aa10.1□□□□□ -0.79
TOP1-201ENST00000361337 FBXW10Q5XX13 1052 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms