RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 TPM1P09493 284 aa25.32■■□□□ 1.64
LDB1-201ENST00000361198 GNG11P61952 73 aa25.32■■□□□ 1.64
LDB1-201ENST00000361198 ASIC1P78348 528 aa25.32■■□□□ 1.64
LDB1-201ENST00000361198 PDE4DQ08499 809 aa25.32■■□□□ 1.64
LDB1-201ENST00000361198 STIM1Q13586 685 aa25.32■■□□□ 1.64
LDB1-201ENST00000361198 PDIA5Q14554 519 aa25.32■■□□□ 1.64
LDB1-201ENST00000361198 CARD6Q9BX69 1037 aa25.32■■□□□ 1.64
LDB1-201ENST00000361198 BLOC1S4Q9NUP1 217 aa25.32■■□□□ 1.64
LDB1-201ENST00000361198 DDX25Q9UHL0 483 aaKnown RBP25.32■■□□□ 1.64
LDB1-201ENST00000361198 PSMA7O14818 248 aa25.31■■□□□ 1.64
LDB1-201ENST00000361198 CASQ1P31415 396 aa25.31■■□□□ 1.64
LDB1-201ENST00000361198 AMPD3Q01432 767 aa25.31■■□□□ 1.64
LDB1-201ENST00000361198 RRP1BQ14684 758 aaKnown RBP25.31■■□□□ 1.64
LDB1-201ENST00000361198 KIFC2Q96AC6 838 aa25.31■■□□□ 1.64
LDB1-201ENST00000361198 CSRNP1Q96S65 589 aa25.31■■□□□ 1.64
LDB1-201ENST00000361198 NUP88Q99567 741 aaPredicted RBP25.31■■□□□ 1.64
LDB1-201ENST00000361198 NUDT12Q9BQG2 462 aa25.31■■□□□ 1.64
LDB1-201ENST00000361198 NAA15Q9BXJ9 866 aaKnown RBP25.31■■□□□ 1.64
LDB1-201ENST00000361198 ZHX1Q9UKY1 873 aaPredicted RBP25.31■■□□□ 1.64
LDB1-201ENST00000361198 FHOD1Q9Y613 1164 aa25.31■■□□□ 1.64
LDB1-201ENST00000361198 GH2P01242 217 aa25.3■■□□□ 1.64
LDB1-201ENST00000361198 STK4Q13043 487 aa25.3■■□□□ 1.64
LDB1-201ENST00000361198 ANKRD20A12PQ8NF67 263 aa25.3■■□□□ 1.64
LDB1-201ENST00000361198 HAS1Q92839 578 aa25.3■■□□□ 1.64
LDB1-201ENST00000361198 RAB34Q9BZG1 259 aa25.3■■□□□ 1.64
LDB1-201ENST00000361198 EXOC1Q9NV70 894 aa25.3■■□□□ 1.64
LDB1-201ENST00000361198 GYPCP04921 128 aa25.3■■□□□ 1.64
LDB1-201ENST00000361198 CASP14P31944 242 aa25.3■■□□□ 1.64
LDB1-201ENST00000361198 GJA10Q969M2 543 aa25.3■■□□□ 1.64
LDB1-201ENST00000361198 MRFAP1Q9Y605 127 aa25.3■■□□□ 1.64
LDB1-201ENST00000361198 ITIH6Q6UXX5 1313 aa25.3■■□□□ 1.64
LDB1-201ENST00000361198 ZRANB2O95218 330 aaKnown RBP eCLIP25.29■■□□□ 1.644e-6■□□□□ 8.7
LDB1-201ENST00000361198 FCER1AP12319 257 aa25.29■■□□□ 1.64
LDB1-201ENST00000361198 TTI2Q6NXR4 508 aa25.29■■□□□ 1.64
LDB1-201ENST00000361198 SV2BQ7L1I2 683 aa25.29■■□□□ 1.64
LDB1-201ENST00000361198 MFAP3LO75121 409 aa25.29■■□□□ 1.64
LDB1-201ENST00000361198 NDUFB10O96000 172 aa25.29■■□□□ 1.64
LDB1-201ENST00000361198 MCM6Q14566 821 aa25.29■■□□□ 1.64
LDB1-201ENST00000361198 TERF2Q15554 542 aa25.29■■□□□ 1.64
LDB1-201ENST00000361198 TTLL6Q8N841 843 aa25.29■■□□□ 1.64
LDB1-201ENST00000361198 GMCL1P1Q8NEA9 526 aa25.29■■□□□ 1.64
LDB1-201ENST00000361198 SNX29Q8TEQ0 813 aa25.29■■□□□ 1.64
LDB1-201ENST00000361198 CCDC47Q96A33 483 aaKnown RBP25.29■■□□□ 1.64
LDB1-201ENST00000361198 TRIM47Q96LD4 638 aa25.29■■□□□ 1.64
LDB1-201ENST00000361198 ARGLU1Q9NWB6 273 aaPredicted RBP25.29■■□□□ 1.64
LDB1-201ENST00000361198 STK17AQ9UEE5 414 aa25.29■■□□□ 1.64
LDB1-201ENST00000361198 ARFGEF1Q9Y6D6 1849 aa25.28■■□□□ 1.64
LDB1-201ENST00000361198 RAD17O75943 681 aa25.28■■□□□ 1.64
LDB1-201ENST00000361198 FXR1P51114 621 aaKnown RBP eCLIP25.28■■□□□ 1.64
LDB1-201ENST00000361198 SNAP25P60880 206 aa25.28■■□□□ 1.64
LDB1-201ENST00000361198 RBM26Q5T8P6 1007 aaKnown RBP25.28■■□□□ 1.64
LDB1-201ENST00000361198 LARP4BQ92615 738 aaKnown RBP25.28■■□□□ 1.64
LDB1-201ENST00000361198 DHTKD1Q96HY7 919 aaPredicted RBP25.28■■□□□ 1.64
LDB1-201ENST00000361198 CDK5RAP3Q96JB5 506 aa25.28■■□□□ 1.64
LDB1-201ENST00000361198 PSME4Q14997 1843 aa25.28■■□□□ 1.64
LDB1-201ENST00000361198 TCP10L2B9ZVM9 353 aa25.28■■□□□ 1.64
LDB1-201ENST00000361198 CCDC175P0C221 793 aa25.28■■□□□ 1.64
LDB1-201ENST00000361198 MTF1Q14872 753 aa25.28■■□□□ 1.64
LDB1-201ENST00000361198 KRT79Q5XKE5 535 aa25.28■■□□□ 1.64
LDB1-201ENST00000361198 RSBN1LQ6PCB5 846 aaPredicted RBP25.28■■□□□ 1.64
LDB1-201ENST00000361198 SPDYE2BA6NHP3 402 aa25.27■■□□□ 1.64
LDB1-201ENST00000361198 MYMKA6NI61 221 aa25.27■■□□□ 1.64
LDB1-201ENST00000361198 SOWAHDA6NJG2 315 aa25.27■■□□□ 1.64
LDB1-201ENST00000361198 SPDYE6P0CI01 402 aa25.27■■□□□ 1.64
LDB1-201ENST00000361198 GCFC2P16383 781 aaKnown RBP25.27■■□□□ 1.64
LDB1-201ENST00000361198 HPS3Q969F9 1004 aa25.27■■□□□ 1.64
LDB1-201ENST00000361198 GMCL1Q96IK5 515 aa25.27■■□□□ 1.64
LDB1-201ENST00000361198 GLT8D2Q9H1C3 349 aa25.27■■□□□ 1.64
LDB1-201ENST00000361198 A0A1W2PRG0 241 aa25.26■■□□□ 1.63
LDB1-201ENST00000361198 CLRN2A0PK11 232 aa25.26■■□□□ 1.63
LDB1-201ENST00000361198 FECHP22830 423 aa25.26■■□□□ 1.63
LDB1-201ENST00000361198 DUSP9Q99956 384 aaKnown RBP25.26■■□□□ 1.63
LDB1-201ENST00000361198 DESI2Q9BSY9 194 aa25.26■■□□□ 1.63
LDB1-201ENST00000361198 THAP9Q9H5L6 903 aa25.26■■□□□ 1.63
LDB1-201ENST00000361198 MRPL44Q9H9J2 332 aaKnown RBP25.26■■□□□ 1.63
LDB1-201ENST00000361198 COL2A1P02458 1487 aaPredicted RBP25.26■■□□□ 1.63
LDB1-201ENST00000361198 PSMD14O00487 310 aa25.26■■□□□ 1.63
LDB1-201ENST00000361198 MEIS2O14770 477 aa25.26■■□□□ 1.63
LDB1-201ENST00000361198 PNMA6AP0CW24 399 aaPredicted RBP25.26■■□□□ 1.63
LDB1-201ENST00000361198 KCNK18Q7Z418 384 aa25.26■■□□□ 1.63
LDB1-201ENST00000361198 ADGRG1Q9Y653 693 aa25.26■■□□□ 1.63
LDB1-201ENST00000361198 CCNE1P24864 410 aa25.25■■□□□ 1.63
LDB1-201ENST00000361198 ECM1Q16610 540 aa25.25■■□□□ 1.63
LDB1-201ENST00000361198 CNGA4Q8IV77 575 aa25.25■■□□□ 1.63
LDB1-201ENST00000361198 KIAA0895Q8NCT3 520 aa25.25■■□□□ 1.63
LDB1-201ENST00000361198 P2RX5Q93086 422 aa25.25■■□□□ 1.63
LDB1-201ENST00000361198 ANO3Q9BYT9 981 aa25.25■■□□□ 1.63
LDB1-201ENST00000361198 ZNF277Q9NRM2 450 aaPredicted RBP25.25■■□□□ 1.63
LDB1-201ENST00000361198 MARCH6O60337 910 aa25.25■■□□□ 1.63
LDB1-201ENST00000361198 EEF1GP26641 437 aaKnown RBP25.25■■□□□ 1.63
LDB1-201ENST00000361198 FAM193AP78312 1265 aa25.25■■□□□ 1.63
LDB1-201ENST00000361198 UBXN1Q04323 297 aa25.25■■□□□ 1.63
LDB1-201ENST00000361198 IKQ13123 557 aaPredicted RBP25.25■■□□□ 1.63
LDB1-201ENST00000361198 TMCO3Q6UWJ1 677 aa25.25■■□□□ 1.63
LDB1-201ENST00000361198 RSRC2Q7L4I2 434 aaKnown RBP25.25■■□□□ 1.63
LDB1-201ENST00000361198 RTKN2Q8IZC4 609 aa25.25■■□□□ 1.63
LDB1-201ENST00000361198 LARGE2Q8N3Y3 721 aa25.25■■□□□ 1.63
LDB1-201ENST00000361198 RAD54LQ92698 747 aa25.25■■□□□ 1.63
LDB1-201ENST00000361198 EEF2KMTQ96G04 330 aa25.25■■□□□ 1.63
LDB1-201ENST00000361198 PSMD1Q99460 953 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms