RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 ANKRD13CQ8N6S4 541 aa23.08■■□□□ 1.28
SMURF1-201ENST00000361125 VPS41P49754 854 aa23.07■■□□□ 1.28
SMURF1-201ENST00000361125 MAN1B1Q9UKM7 699 aa23.07■■□□□ 1.28
SMURF1-201ENST00000361125 IKBKBO14920 756 aa23.07■■□□□ 1.28
SMURF1-201ENST00000361125 STAT2P52630 851 aa23.07■■□□□ 1.28
SMURF1-201ENST00000361125 KCTD2Q14681 263 aa23.07■■□□□ 1.28
SMURF1-201ENST00000361125 TAB3Q8N5C8 712 aaPredicted RBP23.07■■□□□ 1.28
SMURF1-201ENST00000361125 LACTBP83111 547 aaPredicted RBP23.07■■□□□ 1.28
SMURF1-201ENST00000361125 RASSF7Q02833 373 aa23.07■■□□□ 1.28
SMURF1-201ENST00000361125 CEP85LQ5SZL2 805 aa23.07■■□□□ 1.28
SMURF1-201ENST00000361125 LINC00301Q8NCQ3 95 aa23.07■■□□□ 1.28
SMURF1-201ENST00000361125 ATF5Q9Y2D1 282 aaPredicted RBP23.07■■□□□ 1.28
SMURF1-201ENST00000361125 DPH5Q9H2P9 285 aa23.07■■□□□ 1.28
SMURF1-201ENST00000361125 MAGEF1Q9HAY2 307 aa23.07■■□□□ 1.28
SMURF1-201ENST00000361125 ZNF131P52739 623 aa23.07■■□□□ 1.28
SMURF1-201ENST00000361125 KRT71Q3SY84 523 aa23.07■■□□□ 1.28
SMURF1-201ENST00000361125 PLCB1Q9NQ66 1216 aa23.07■■□□□ 1.28
SMURF1-201ENST00000361125 PALM3A6NDB9 673 aaPredicted RBP23.06■■□□□ 1.28
SMURF1-201ENST00000361125 SYNE4Q8N205 404 aa23.06■■□□□ 1.28
SMURF1-201ENST00000361125 GSDMAQ96QA5 445 aa23.06■■□□□ 1.28
SMURF1-201ENST00000361125 PCDHB6Q9Y5E3 794 aa23.06■■□□□ 1.28
SMURF1-201ENST00000361125 NR2F2P24468 414 aa23.06■■□□□ 1.28
SMURF1-201ENST00000361125 ANKRD42Q8N9B4 389 aa23.06■■□□□ 1.28
SMURF1-201ENST00000361125 CAPN9O14815 690 aa23.06■■□□□ 1.28
SMURF1-201ENST00000361125 ADCY8P40145 1251 aa23.06■■□□□ 1.28
SMURF1-201ENST00000361125 CDK8P49336 464 aa23.06■■□□□ 1.28
SMURF1-201ENST00000361125 RBL2Q08999 1139 aa23.06■■□□□ 1.28
SMURF1-201ENST00000361125 STMN2Q93045 179 aa23.06■■□□□ 1.28
SMURF1-201ENST00000361125 SPATA31A3Q5VYP0 1347 aa23.06■■□□□ 1.28
SMURF1-201ENST00000361125 HNRNPDLO14979 420 aaKnown RBP23.06■■□□□ 1.28
SMURF1-201ENST00000361125 CLIC2O15247 247 aa23.06■■□□□ 1.28
SMURF1-201ENST00000361125 KAZNQ674X7 775 aa23.06■■□□□ 1.28
SMURF1-201ENST00000361125 DPP9Q86TI2 863 aa23.06■■□□□ 1.28
SMURF1-201ENST00000361125 SH3RF3Q8TEJ3 882 aaPredicted RBP23.06■■□□□ 1.28
SMURF1-201ENST00000361125 PCIF1Q9H4Z3 704 aa23.06■■□□□ 1.28
SMURF1-201ENST00000361125 SEPT10Q9P0V9 454 aa23.06■■□□□ 1.28
SMURF1-201ENST00000361125 ERCC6L2Q5T890 1561 aa23.06■■□□□ 1.28
SMURF1-201ENST00000361125 ADGRL3Q9HAR2 1447 aa23.05■■□□□ 1.28
SMURF1-201ENST00000361125 USP14P54578 494 aa23.05■■□□□ 1.28
SMURF1-201ENST00000361125 PFDN4Q9NQP4 134 aa23.05■■□□□ 1.28
SMURF1-201ENST00000361125 ABCC12Q96J65 1359 aa23.05■■□□□ 1.28
SMURF1-201ENST00000361125 PRPF3O43395 683 aaKnown RBP23.05■■□□□ 1.28
SMURF1-201ENST00000361125 UNC13BO14795 1591 aa23.05■■□□□ 1.28
SMURF1-201ENST00000361125 SEC31AO94979 1220 aaKnown RBP23.05■■□□□ 1.28
SMURF1-201ENST00000361125 CAPN12Q6ZSI9 719 aa23.05■■□□□ 1.28
SMURF1-201ENST00000361125 TRIM50Q86XT4 487 aa23.05■■□□□ 1.28
SMURF1-201ENST00000361125 PARP2Q9UGN5 583 aa23.05■■□□□ 1.28
SMURF1-201ENST00000361125 MAN1A1P33908 653 aa23.05■■□□□ 1.28
SMURF1-201ENST00000361125 CTNNA1P35221 906 aaKnown RBP23.05■■□□□ 1.28
SMURF1-201ENST00000361125 CUEDC2Q9H467 287 aa23.05■■□□□ 1.28
SMURF1-201ENST00000361125 PNMA2Q9UL42 364 aa23.05■■□□□ 1.28
SMURF1-201ENST00000361125 EPN1Q9Y6I3 576 aaPredicted RBP23.05■■□□□ 1.28
SMURF1-201ENST00000361125 SYNJ2BP-COX16A0A087WUM0 186 aa23.05■■□□□ 1.28
SMURF1-201ENST00000361125 PLEKHA8P1O95397 391 aa23.05■■□□□ 1.28
SMURF1-201ENST00000361125 IGKV5-2P06315 115 aa23.05■■□□□ 1.28
SMURF1-201ENST00000361125 PALM2Q8IXS6 379 aa23.05■■□□□ 1.28
SMURF1-201ENST00000361125 COX16Q9P0S2 106 aa23.05■■□□□ 1.28
SMURF1-201ENST00000361125 TMOD1P28289 359 aa23.04■■□□□ 1.28
SMURF1-201ENST00000361125 KIF22Q14807 665 aa23.04■■□□□ 1.28
SMURF1-201ENST00000361125 GKAP1Q5VSY0 366 aaPredicted RBP23.04■■□□□ 1.28
SMURF1-201ENST00000361125 P2RX5Q93086 422 aa23.04■■□□□ 1.28
SMURF1-201ENST00000361125 AK8Q96MA6 479 aa23.04■■□□□ 1.28
SMURF1-201ENST00000361125 HADHQ16836 314 aaKnown RBP23.04■■□□□ 1.28
SMURF1-201ENST00000361125 AKT3Q9Y243 479 aa23.04■■□□□ 1.28
SMURF1-201ENST00000361125 CTAGE3PQ8IX95 158 aa23.04■■□□□ 1.28
SMURF1-201ENST00000361125 PI4KBQ9UBF8 816 aa23.04■■□□□ 1.28
SMURF1-201ENST00000361125 NPR1P16066 1061 aa23.04■■□□□ 1.28
SMURF1-201ENST00000361125 LGSNQ5TDP6 509 aa23.04■■□□□ 1.28
SMURF1-201ENST00000361125 GABPB2Q8TAK5 448 aaPredicted RBP23.04■■□□□ 1.28
SMURF1-201ENST00000361125 KRT12Q99456 494 aa23.04■■□□□ 1.28
SMURF1-201ENST00000361125 PHLPP2Q6ZVD8 1323 aa23.04■■□□□ 1.28
SMURF1-201ENST00000361125 SNAP23O00161 211 aa23.03■■□□□ 1.28
SMURF1-201ENST00000361125 GMNNO75496 209 aa23.03■■□□□ 1.28
SMURF1-201ENST00000361125 ZNF658Q5TYW1 1059 aaPredicted RBP23.03■■□□□ 1.28
SMURF1-201ENST00000361125 CYP2D6P10635 497 aa23.03■■□□□ 1.28
SMURF1-201ENST00000361125 HOXA13P31271 388 aaPredicted RBP23.03■■□□□ 1.28
SMURF1-201ENST00000361125 NAA35Q5VZE5 725 aa23.03■■□□□ 1.28
SMURF1-201ENST00000361125 CDC37Q16543 378 aaPredicted RBP23.03■■□□□ 1.28
SMURF1-201ENST00000361125 CCDC93Q567U6 631 aa23.03■■□□□ 1.28
SMURF1-201ENST00000361125 RABGGTAQ92696 567 aa23.03■■□□□ 1.28
SMURF1-201ENST00000361125 CROCC2H7BZ55 1655 aa23.03■■□□□ 1.28
SMURF1-201ENST00000361125 CCND2P30279 289 aa23.03■■□□□ 1.28
SMURF1-201ENST00000361125 DHX36Q9H2U1 1008 aaKnown RBP23.03■■□□□ 1.28
SMURF1-201ENST00000361125 DISC1Q9NRI5 854 aa23.03■■□□□ 1.28
SMURF1-201ENST00000361125 PCDHB4Q9Y5E5 795 aa23.03■■□□□ 1.28
SMURF1-201ENST00000361125 H2AFZP0C0S5 128 aa23.03■■□□□ 1.28
SMURF1-201ENST00000361125 MIS18BP1Q6P0N0 1132 aa23.03■■□□□ 1.28
SMURF1-201ENST00000361125 H2AFVQ71UI9 128 aa23.03■■□□□ 1.28
SMURF1-201ENST00000361125 MADDQ8WXG6 1647 aa23.02■■□□□ 1.28
SMURF1-201ENST00000361125 OSBPP22059 807 aa23.02■■□□□ 1.28
SMURF1-201ENST00000361125 CACNB3P54284 484 aa23.02■■□□□ 1.28
SMURF1-201ENST00000361125 HAUS4Q9H6D7 363 aa23.02■■□□□ 1.28
SMURF1-201ENST00000361125 KMT5AQ9NQR1 393 aa23.02■■□□□ 1.28
SMURF1-201ENST00000361125 CD2APQ9Y5K6 639 aa23.02■■□□□ 1.28
SMURF1-201ENST00000361125 IFNAR1P17181 557 aa23.02■■□□□ 1.28
SMURF1-201ENST00000361125 CROCCP2Q86T23 111 aa23.02■■□□□ 1.28
SMURF1-201ENST00000361125 I3L4J1 428 aa23.02■■□□□ 1.28
SMURF1-201ENST00000361125 PSMC2P35998 433 aaKnown RBP23.02■■□□□ 1.28
SMURF1-201ENST00000361125 EEPD1Q7L9B9 569 aa23.02■■□□□ 1.28
SMURF1-201ENST00000361125 ATP6V0A1Q93050 837 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms