RNA–Protein interactions for RNA: ENST00000360958.6

TPM2-202, Transcript of tropomyosin 2, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene TPM2, Length 1,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-202ENST00000360958 PSTPIP2Q9H939 334 aa17.2■□□□□ 0.34
TPM2-202ENST00000360958 NCOA5Q9HCD5 579 aaKnown RBP17.2■□□□□ 0.34
TPM2-202ENST00000360958 STXBP3O00186 592 aa17.19■□□□□ 0.34
TPM2-202ENST00000360958 CPLX1O14810 134 aa17.19■□□□□ 0.34
TPM2-202ENST00000360958 DUSP11O75319 330 aaKnown RBP17.19■□□□□ 0.34
TPM2-202ENST00000360958 CDKL5O76039 1030 aa17.19■□□□□ 0.34
TPM2-202ENST00000360958 RARBP10826 455 aa17.19■□□□□ 0.34
TPM2-202ENST00000360958 CCT2P78371 535 aaKnown RBP17.19■□□□□ 0.34
TPM2-202ENST00000360958 PDE4DQ08499 809 aa17.19■□□□□ 0.34
TPM2-202ENST00000360958 RABEP1Q15276 862 aa17.19■□□□□ 0.34
TPM2-202ENST00000360958 CCDC144BQ3MJ40 725 aa17.19■□□□□ 0.34
TPM2-202ENST00000360958 TAPT1Q6NXT6 567 aa17.19■□□□□ 0.34
TPM2-202ENST00000360958 TRIM22Q8IYM9 498 aa17.19■□□□□ 0.34
TPM2-202ENST00000360958 CCDC12Q8WUD4 166 aaPredicted RBP17.19■□□□□ 0.34
TPM2-202ENST00000360958 CUL5Q93034 780 aa17.19■□□□□ 0.34
TPM2-202ENST00000360958 PDCD2LQ9BRP1 358 aa17.19■□□□□ 0.34
TPM2-202ENST00000360958 SLKQ9H2G2 1235 aaPredicted RBP17.19■□□□□ 0.34
TPM2-202ENST00000360958 SH3GLB2Q9NR46 395 aa17.19■□□□□ 0.34
TPM2-202ENST00000360958 Q9Y3F1 56 aa17.19■□□□□ 0.34
TPM2-202ENST00000360958 MKI67P46013 3256 aaKnown RBP17.18■□□□□ 0.34
TPM2-202ENST00000360958 hCG_1642624A0A1W2PR95 340 aa17.18■□□□□ 0.34
TPM2-202ENST00000360958 DNM1LO00429 736 aa17.18■□□□□ 0.34
TPM2-202ENST00000360958 STAM2O75886 525 aa17.18■□□□□ 0.34
TPM2-202ENST00000360958 MNX1P50219 401 aaPredicted RBP17.18■□□□□ 0.34
TPM2-202ENST00000360958 AKAP17AQ02040 695 aaKnown RBP17.18■□□□□ 0.34
TPM2-202ENST00000360958 SCRN1Q12765 414 aa17.18■□□□□ 0.34
TPM2-202ENST00000360958 STXBP2Q15833 593 aa17.18■□□□□ 0.34
TPM2-202ENST00000360958 ARHGEF16Q5VV41 709 aa17.18■□□□□ 0.34
TPM2-202ENST00000360958 MCTP2Q6DN12 878 aa17.18■□□□□ 0.34
TPM2-202ENST00000360958 TYW1BQ6NUM6 668 aa17.18■□□□□ 0.34
TPM2-202ENST00000360958 XRRA1Q6P2D8 792 aa17.18■□□□□ 0.34
TPM2-202ENST00000360958 ARRDC4Q8NCT1 418 aa17.18■□□□□ 0.34
TPM2-202ENST00000360958 UPF3AQ9H1J1 476 aaKnown RBP17.18■□□□□ 0.34
TPM2-202ENST00000360958 RIC8AQ9NPQ8 531 aa17.18■□□□□ 0.34
TPM2-202ENST00000360958 ZHX1Q9UKY1 873 aaPredicted RBP17.18■□□□□ 0.34
TPM2-202ENST00000360958 STK36Q9NRP7 1315 aa17.18■□□□□ 0.34
TPM2-202ENST00000360958 EIF3JO75822 258 aaKnown RBP17.17■□□□□ 0.34
TPM2-202ENST00000360958 FARP2O94887 1054 aaPredicted RBP17.17■□□□□ 0.34
TPM2-202ENST00000360958 NR3C2P08235 984 aa17.17■□□□□ 0.34
TPM2-202ENST00000360958 CST5P28325 142 aaPredicted RBP17.17■□□□□ 0.34
TPM2-202ENST00000360958 HOXA13P31271 388 aaPredicted RBP17.17■□□□□ 0.34
TPM2-202ENST00000360958 NAPAP54920 295 aa17.17■□□□□ 0.34
TPM2-202ENST00000360958 VSIG10LQ86VR7 867 aa17.17■□□□□ 0.34
TPM2-202ENST00000360958 GPKOWQ92917 476 aaPredicted RBP eCLIP17.17■□□□□ 0.34
TPM2-202ENST00000360958 PHKBQ93100 1093 aa17.17■□□□□ 0.34
TPM2-202ENST00000360958 GTF3C6Q969F1 213 aa17.17■□□□□ 0.34
TPM2-202ENST00000360958 ZMYND12Q9H0C1 365 aa17.17■□□□□ 0.34
TPM2-202ENST00000360958 LIMCH1Q9UPQ0 1083 aa17.17■□□□□ 0.34
TPM2-202ENST00000360958 GNEQ9Y223 722 aaKnown RBP17.17■□□□□ 0.34
TPM2-202ENST00000360958 NKRFO15226 690 aaKnown RBP eCLIP17.16■□□□□ 0.34
TPM2-202ENST00000360958 ADAMTS4O75173 837 aa17.16■□□□□ 0.34
TPM2-202ENST00000360958 DEXIO95424 95 aa17.16■□□□□ 0.34
TPM2-202ENST00000360958 FOSP01100 380 aaPredicted RBP17.16■□□□□ 0.34
TPM2-202ENST00000360958 COL6A1P12109 1028 aa17.16■□□□□ 0.34
TPM2-202ENST00000360958 GJA9P57773 515 aa17.16■□□□□ 0.34
TPM2-202ENST00000360958 SSRP1Q08945 709 aaKnown RBP17.16■□□□□ 0.34
TPM2-202ENST00000360958 PGM5Q15124 567 aa17.16■□□□□ 0.34
TPM2-202ENST00000360958 ME3Q16798 604 aa17.16■□□□□ 0.34
TPM2-202ENST00000360958 FBXO16Q8IX29 292 aaPredicted RBP17.16■□□□□ 0.34
TPM2-202ENST00000360958 SMARCC2Q8TAQ2 1214 aa17.16■□□□□ 0.34
TPM2-202ENST00000360958 SCFD2Q8WU76 684 aa17.16■□□□□ 0.34
TPM2-202ENST00000360958 LARP6Q9BRS8 491 aaKnown RBP17.16■□□□□ 0.34
TPM2-202ENST00000360958 SLC26A6Q9BXS9 759 aa17.16■□□□□ 0.34
TPM2-202ENST00000360958 XPNPEP3Q9NQH7 507 aa17.16■□□□□ 0.34
TPM2-202ENST00000360958 ADCY6O43306 1168 aa17.15■□□□□ 0.34
TPM2-202ENST00000360958 EIF2AK2P19525 551 aaKnown RBP17.15■□□□□ 0.34
TPM2-202ENST00000360958 CLK2P49760 499 aaKnown RBP17.15■□□□□ 0.34
TPM2-202ENST00000360958 ADCY7P51828 1080 aa17.15■□□□□ 0.34
TPM2-202ENST00000360958 TNFAIP2Q03169 654 aa17.15■□□□□ 0.34
TPM2-202ENST00000360958 STK3Q13188 491 aa17.15■□□□□ 0.34
TPM2-202ENST00000360958 DUSP28Q4G0W2 176 aa17.15■□□□□ 0.34
TPM2-202ENST00000360958 PCNX4Q63HM2 1172 aa17.15■□□□□ 0.34
TPM2-202ENST00000360958 USP17L6PQ6QN14 398 aa17.15■□□□□ 0.34
TPM2-202ENST00000360958 NECAB2Q7Z6G3 386 aa17.15■□□□□ 0.34
TPM2-202ENST00000360958 RNF180Q86T96 592 aa17.15■□□□□ 0.34
TPM2-202ENST00000360958 KLHDC9Q8NEP7 349 aa17.15■□□□□ 0.34
TPM2-202ENST00000360958 CCDC148Q8NFR7 591 aa17.15■□□□□ 0.34
TPM2-202ENST00000360958 ZSCAN31Q96LW9 406 aaPredicted RBP17.15■□□□□ 0.34
TPM2-202ENST00000360958 TSEN34Q9BSV6 310 aaKnown RBP17.15■□□□□ 0.34
TPM2-202ENST00000360958 SH2B1Q9NRF2 756 aaPredicted RBP17.15■□□□□ 0.34
TPM2-202ENST00000360958 SMCO2A6NFE2 343 aa17.14■□□□□ 0.33
TPM2-202ENST00000360958 TGFB3P10600 412 aa17.14■□□□□ 0.33
TPM2-202ENST00000360958 GNA11P29992 359 aa17.14■□□□□ 0.33
TPM2-202ENST00000360958 CCND2P30279 289 aa17.14■□□□□ 0.33
TPM2-202ENST00000360958 ADCYAP1R1P41586 468 aa17.14■□□□□ 0.33
TPM2-202ENST00000360958 MLLT1Q03111 559 aaPredicted RBP17.14■□□□□ 0.33
TPM2-202ENST00000360958 AP3B2Q13367 1082 aa17.14■□□□□ 0.33
TPM2-202ENST00000360958 LRRC41Q15345 812 aa17.14■□□□□ 0.33
TPM2-202ENST00000360958 CCDC62Q6P9F0 684 aa17.14■□□□□ 0.33
TPM2-202ENST00000360958 KCNV1Q6PIU1 500 aa17.14■□□□□ 0.33
TPM2-202ENST00000360958 FCHSD1Q86WN1 690 aa17.14■□□□□ 0.33
TPM2-202ENST00000360958 WDR11Q9BZH6 1224 aa17.14■□□□□ 0.33
TPM2-202ENST00000360958 EHMT1Q9H9B1 1298 aa17.14■□□□□ 0.33
TPM2-202ENST00000360958 SPC25Q9HBM1 224 aa17.14■□□□□ 0.33
TPM2-202ENST00000360958 SYNRGQ9UMZ2 1314 aa17.14■□□□□ 0.33
TPM2-202ENST00000360958 KIAA1217Q5T5P2 1943 aa17.13■□□□□ 0.33
TPM2-202ENST00000360958 SPDYE3A6NKU9 549 aa17.13■□□□□ 0.33
TPM2-202ENST00000360958 TNRC18O15417 2968 aaPredicted RBP17.13■□□□□ 0.33
TPM2-202ENST00000360958 ST18O60284 1047 aa17.13■□□□□ 0.33
TPM2-202ENST00000360958 LARGE1O95461 756 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms