RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 PTPREP23469 700 aa14.86□□□□□ -0.03
SQSTM1-201ENST00000360718 PTGDRQ13258 359 aa14.86□□□□□ -0.03
SQSTM1-201ENST00000360718 NEK8Q86SG6 692 aa14.86□□□□□ -0.03
SQSTM1-201ENST00000360718 OTUD5Q96G74 571 aa14.86□□□□□ -0.03
SQSTM1-201ENST00000360718 TMOD4Q9NZQ9 345 aa14.86□□□□□ -0.03
SQSTM1-201ENST00000360718 FBXO2Q9UK22 296 aaPredicted RBP14.86□□□□□ -0.03
SQSTM1-201ENST00000360718 SRPRBQ9Y5M8 271 aaKnown RBP14.86□□□□□ -0.03
SQSTM1-201ENST00000360718 SH3D19Q5HYK7 790 aa14.85□□□□□ -0.03
SQSTM1-201ENST00000360718 ZNF579Q8NAF0 562 aaKnown RBP14.85□□□□□ -0.03
SQSTM1-201ENST00000360718 CCDC150Q8NCX0 1101 aa14.85□□□□□ -0.03
SQSTM1-201ENST00000360718 TBCKQ8TEA7 893 aa14.85□□□□□ -0.03
SQSTM1-201ENST00000360718 TBC1D5Q92609 795 aa14.85□□□□□ -0.03
SQSTM1-201ENST00000360718 AGBL1Q96MI9 1066 aa14.85□□□□□ -0.03
SQSTM1-201ENST00000360718 PPP1R9AQ9ULJ8 1098 aa14.85□□□□□ -0.03
SQSTM1-201ENST00000360718 CTDP1Q9Y5B0 961 aaPredicted RBP14.85□□□□□ -0.03
SQSTM1-201ENST00000360718 ATP2C1P98194 919 aaPredicted RBP14.85□□□□□ -0.03
SQSTM1-201ENST00000360718 TREML2Q5T2D2 321 aa14.85□□□□□ -0.03
SQSTM1-201ENST00000360718 LDLRAD1Q5T700 205 aa14.85□□□□□ -0.03
SQSTM1-201ENST00000360718 SHC4Q6S5L8 630 aa14.85□□□□□ -0.03
SQSTM1-201ENST00000360718 LDHDQ86WU2 507 aa14.85□□□□□ -0.03
SQSTM1-201ENST00000360718 RBM46Q8TBY0 533 aaKnown RBP14.85□□□□□ -0.03
SQSTM1-201ENST00000360718 ZNF592Q92610 1267 aa14.85□□□□□ -0.03
SQSTM1-201ENST00000360718 ATG4CQ96DT6 458 aa14.85□□□□□ -0.03
SQSTM1-201ENST00000360718 LOC285556D6RIA3 1793 aa14.84□□□□□ -0.03
SQSTM1-201ENST00000360718 RBBP6Q7Z6E9 1792 aaKnown RBP14.84□□□□□ -0.03
SQSTM1-201ENST00000360718 SPDYE5A6NIY4 337 aa14.84□□□□□ -0.03
SQSTM1-201ENST00000360718 CCZ1BP86790 482 aa14.84□□□□□ -0.03
SQSTM1-201ENST00000360718 CCZ1P86791 482 aaPredicted RBP14.84□□□□□ -0.03
SQSTM1-201ENST00000360718 ORC2Q13416 577 aaPredicted RBP14.84□□□□□ -0.03
SQSTM1-201ENST00000360718 LETM2Q2VYF4 491 aa14.84□□□□□ -0.03
SQSTM1-201ENST00000360718 SPECC1Q5M775 1068 aa14.84□□□□□ -0.03
SQSTM1-201ENST00000360718 TEX2Q8IWB9 1127 aa14.84□□□□□ -0.03
SQSTM1-201ENST00000360718 C4orf32Q8N8J7 132 aa14.84□□□□□ -0.03
SQSTM1-201ENST00000360718 SLC38A10Q9HBR0 1119 aa14.84□□□□□ -0.03
SQSTM1-201ENST00000360718 CGNQ9P2M7 1197 aaKnown RBP14.84□□□□□ -0.03
SQSTM1-201ENST00000360718 TUBB4AP04350 444 aa14.83□□□□□ -0.03
SQSTM1-201ENST00000360718 FDX1P10109 184 aa14.83□□□□□ -0.03
SQSTM1-201ENST00000360718 HOXA13P31271 388 aaPredicted RBP14.83□□□□□ -0.03
SQSTM1-201ENST00000360718 GJA5P36382 358 aa14.83□□□□□ -0.03
SQSTM1-201ENST00000360718 DPCR1Q3MIW9 517 aa14.83□□□□□ -0.03
SQSTM1-201ENST00000360718 RESP18Q5W5W9 173 aa14.83□□□□□ -0.03
SQSTM1-201ENST00000360718 ARL6IP4Q66PJ3 421 aaKnown RBP14.83□□□□□ -0.03
SQSTM1-201ENST00000360718 NYAP1Q6ZVC0 841 aa14.83□□□□□ -0.03
SQSTM1-201ENST00000360718 ARMC9Q7Z3E5 817 aa14.83□□□□□ -0.03
SQSTM1-201ENST00000360718 ERO1BQ86YB8 467 aa14.83□□□□□ -0.03
SQSTM1-201ENST00000360718 ERCC4Q92889 916 aaPredicted RBP14.83□□□□□ -0.03
SQSTM1-201ENST00000360718 TMEM60Q9H2L4 133 aa14.83□□□□□ -0.03
SQSTM1-201ENST00000360718 PNMA2Q9UL42 364 aa14.83□□□□□ -0.03
SQSTM1-201ENST00000360718 MRPL11Q9Y3B7 192 aaKnown RBP14.83□□□□□ -0.03
SQSTM1-201ENST00000360718 LAD1O00515 517 aa14.83□□□□□ -0.04
SQSTM1-201ENST00000360718 IKBKBO14920 756 aa14.83□□□□□ -0.04
SQSTM1-201ENST00000360718 CCNT1O60563 726 aaKnown RBP14.83□□□□□ -0.04
SQSTM1-201ENST00000360718 SMC2O95347 1197 aa14.83□□□□□ -0.04
SQSTM1-201ENST00000360718 PFKFB1P16118 471 aa14.83□□□□□ -0.04
SQSTM1-201ENST00000360718 SYKP43405 635 aa14.83□□□□□ -0.04
SQSTM1-201ENST00000360718 PPATQ06203 517 aa14.83□□□□□ -0.04
SQSTM1-201ENST00000360718 NCBP1Q09161 790 aaKnown RBP14.83□□□□□ -0.04
SQSTM1-201ENST00000360718 AP3B2Q13367 1082 aa14.83□□□□□ -0.04
SQSTM1-201ENST00000360718 ARID5BQ14865 1188 aa14.83□□□□□ -0.04
SQSTM1-201ENST00000360718 IL17AQ16552 155 aa14.83□□□□□ -0.04
SQSTM1-201ENST00000360718 POTEEQ6S8J3 1075 aa14.83□□□□□ -0.04
SQSTM1-201ENST00000360718 CATSPERGQ6ZRH7 1159 aa14.83□□□□□ -0.04
SQSTM1-201ENST00000360718 CPXCR1Q8N123 301 aa14.83□□□□□ -0.04
SQSTM1-201ENST00000360718 CCAR2Q8N163 923 aaKnown RBP14.83□□□□□ -0.04
SQSTM1-201ENST00000360718 KIF18AQ8NI77 898 aa14.83□□□□□ -0.04
SQSTM1-201ENST00000360718 RAVER2Q9HCJ3 691 aaKnown RBP14.83□□□□□ -0.04
SQSTM1-201ENST00000360718 ABCB11O95342 1321 aa14.83□□□□□ -0.04
SQSTM1-201ENST00000360718 A0A087WWV3 80 aa14.82□□□□□ -0.04
SQSTM1-201ENST00000360718 VWA5AO00534 786 aa14.82□□□□□ -0.04
SQSTM1-201ENST00000360718 FOSP01100 380 aaPredicted RBP14.82□□□□□ -0.04
SQSTM1-201ENST00000360718 ICAM1P05362 532 aa14.82□□□□□ -0.04
SQSTM1-201ENST00000360718 OPTNQ96CV9 577 aa14.82□□□□□ -0.04
SQSTM1-201ENST00000360718 NAP1L4Q99733 375 aaKnown RBP14.82□□□□□ -0.04
SQSTM1-201ENST00000360718 PRDM4Q9UKN5 801 aa14.82□□□□□ -0.04
SQSTM1-201ENST00000360718 SPDYE3A6NKU9 549 aa14.82□□□□□ -0.04
SQSTM1-201ENST00000360718 KCNJ6P48051 423 aa14.82□□□□□ -0.04
SQSTM1-201ENST00000360718 USP49Q70CQ1 688 aa14.82□□□□□ -0.04
SQSTM1-201ENST00000360718 REPS2Q8NFH8 660 aa14.82□□□□□ -0.04
SQSTM1-201ENST00000360718 IFNKQ9P0W0 207 aa14.82□□□□□ -0.04
SQSTM1-201ENST00000360718 CCPG1Q9ULG6 757 aa14.82□□□□□ -0.04
SQSTM1-201ENST00000360718 A0A0G2JLL6 359 aaPredicted RBP14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 VWA3AA6NCI4 1184 aa14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 ZBED4O75132 1171 aa14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 TDP2O95551 362 aa14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 DSG3P32926 999 aa14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 CBX1P83916 185 aa14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 MOGSQ13724 837 aa14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 PRRT2Q7Z6L0 340 aaPredicted RBP14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 ANO3Q9BYT9 981 aa14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 XPO4Q9C0E2 1151 aaKnown RBP14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 CSRNP2Q9H175 543 aa14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 ADAMTS5Q9UNA0 930 aa14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 KCNH4Q9UQ05 1017 aa14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 FAM237AA0A1B0GTK4 181 aa14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 NFIBO00712 420 aa14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 CCP110O43303 1012 aa14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 CBFA2T2O43439 604 aa14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 PEX10O60683 326 aa14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 ITGBL1O95965 494 aaPredicted RBP14.81□□□□□ -0.04
SQSTM1-201ENST00000360718 SFPQP23246 707 aaKnown RBP eCLIP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms