RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ZNF189O75820 626 aaPredicted RBP14.3□□□□□ -0.12
SRGAP3-201ENST00000360413 ALDH1B1P30837 517 aa14.3□□□□□ -0.12
SRGAP3-201ENST00000360413 ZBTB41Q5SVQ8 909 aa14.3□□□□□ -0.12
SRGAP3-201ENST00000360413 NCF2P19878 526 aaPredicted RBP14.3□□□□□ -0.12
SRGAP3-201ENST00000360413 FAM186BQ8IYM0 893 aa14.3□□□□□ -0.12
SRGAP3-201ENST00000360413 ABI1Q8IZP0 508 aa14.3□□□□□ -0.12
SRGAP3-201ENST00000360413 KCNV2Q8TDN2 545 aa14.3□□□□□ -0.12
SRGAP3-201ENST00000360413 MRPL40Q9NQ50 206 aaKnown RBP14.3□□□□□ -0.12
SRGAP3-201ENST00000360413 TBK1Q9UHD2 729 aa14.3□□□□□ -0.12
SRGAP3-201ENST00000360413 CHEK2O96017 543 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 ANXA1P04083 346 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 KRT8P05787 483 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 YWHAGP61981 247 aaKnown RBP eCLIP14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 NME9Q86XW9 330 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 PARP9Q8IXQ6 854 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 LINS1Q8NG48 757 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 PKD2L1Q9P0L9 805 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 ZNF229Q9UJW7 825 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 SPDYE2BA6NHP3 402 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 SPDYE6P0CI01 402 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 IGBP1P78318 339 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 TCP11X2Q5H9J9 407 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 RNF207Q6ZRF8 634 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 LZICQ8WZA0 190 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 SUCLA2Q9P2R7 463 aaPredicted RBP14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 STRIP2Q9ULQ0 834 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 ATG16L1Q676U5 607 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 NELFCDQ8IXH7 590 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 GFM2Q969S9 779 aaKnown RBP14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 GINS2Q9Y248 185 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 GYG2O15488 501 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 GYS2P54840 703 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 SESTD1Q86VW0 696 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 DHX38Q92620 1227 aaKnown RBP14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 UPF3AQ9H1J1 476 aaKnown RBP14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 WDR17Q8IZU2 1322 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 TBCCQ15814 346 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 TRAPPC3LQ5T215 181 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 ADALQ6DHV7 355 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 GIPC2Q8TF65 315 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 EIF4E1BA6NMX2 242 aaKnown RBP14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 ATP2B4P23634 1241 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 RASSF7Q02833 373 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 METTL14Q9HCE5 456 aaKnown RBP14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 ZBTB40Q9NUA8 1239 aa14.29□□□□□ -0.12
SRGAP3-201ENST00000360413 NPR1P16066 1061 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 CCDC15Q0P6D6 951 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 MAEAQ7L5Y9 396 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 STAMQ92783 540 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 ADAM21Q9UKJ8 722 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 AOX1Q06278 1338 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 WDR64B1ANS9 1081 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 IL2RBP14784 551 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 CIITAP33076 1130 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 PARD3BQ8TEW8 1205 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 CXorf56Q9H5V9 222 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 STOML1Q9UBI4 398 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 B4E1Z4 1266 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 GAS7O60861 476 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 DDIT3P35638 169 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 OTUB1Q96FW1 271 aaPredicted RBP14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 FANCLQ9NW38 375 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 LCMT1Q9UIC8 334 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 H3BRJ5 948 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 NSFP46459 744 aaKnown RBP14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 BZW1Q7L1Q6 419 aaKnown RBP14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 TRIM59Q8IWR1 403 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 SNX29Q8TEQ0 813 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 ING2Q9H160 280 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 ZNF148Q9UQR1 794 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 CFLARO15519 480 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 PLCH2O75038 1416 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 ITKQ08881 620 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 DIS3L2Q8IYB7 885 aaKnown RBP14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 ARAP1Q96P48 1450 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 NVLO15381 856 aaKnown RBP14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 OCM2P0CE71 109 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 OCMP0CE72 109 aaPredicted RBP14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 TRPC1P48995 793 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 TMED10P49755 219 aaKnown RBP14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 HIPK4Q8NE63 616 aa14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 CACTINQ8WUQ7 758 aaKnown RBP14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 FBXO2Q9UK22 296 aaPredicted RBP14.28□□□□□ -0.12
SRGAP3-201ENST00000360413 KRT87PA6NCN2 255 aa14.27□□□□□ -0.12
SRGAP3-201ENST00000360413 SLCO1A2P46721 670 aa14.27□□□□□ -0.12
SRGAP3-201ENST00000360413 PDE1BQ01064 536 aa14.27□□□□□ -0.12
SRGAP3-201ENST00000360413 BFSP1Q12934 665 aa14.27□□□□□ -0.12
SRGAP3-201ENST00000360413 GGA1Q9UJY5 639 aa14.27□□□□□ -0.12
SRGAP3-201ENST00000360413 SGK1O00141 431 aa14.27□□□□□ -0.12
SRGAP3-201ENST00000360413 ATP5HO75947 161 aa14.27□□□□□ -0.12
SRGAP3-201ENST00000360413 SLFN14P0C7P3 912 aa14.27□□□□□ -0.12
SRGAP3-201ENST00000360413 KRT4P19013 534 aa14.27□□□□□ -0.12
SRGAP3-201ENST00000360413 RBM6P78332 1123 aaKnown RBP14.27□□□□□ -0.12
SRGAP3-201ENST00000360413 HDLBPQ00341 1268 aaKnown RBP14.27□□□□□ -0.12
SRGAP3-201ENST00000360413 FBXL13Q8NEE6 735 aa14.27□□□□□ -0.12
SRGAP3-201ENST00000360413 MAGOHBQ96A72 148 aaKnown RBP14.27□□□□□ -0.12
SRGAP3-201ENST00000360413 PHKBQ93100 1093 aa14.27□□□□□ -0.12
SRGAP3-201ENST00000360413 NOVA2Q9UNW9 492 aaKnown RBP14.27□□□□□ -0.12
SRGAP3-201ENST00000360413 TFDP1Q14186 410 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms