RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 STK17AQ9UEE5 414 aa12.41□□□□□ -0.42
SSU72-202ENST00000359060 USP8P40818 1118 aa12.41□□□□□ -0.42
SSU72-202ENST00000359060 SEPT2Q15019 361 aa12.41□□□□□ -0.42
SSU72-202ENST00000359060 MAEAQ7L5Y9 396 aa12.41□□□□□ -0.42
SSU72-202ENST00000359060 NAP1L4Q99733 375 aaKnown RBP12.41□□□□□ -0.42
SSU72-202ENST00000359060 HSD3B7Q9H2F3 369 aa12.41□□□□□ -0.42
SSU72-202ENST00000359060 HDAC9Q9UKV0 1011 aa12.41□□□□□ -0.42
SSU72-202ENST00000359060 MCM3P25205 808 aa12.41□□□□□ -0.42
SSU72-202ENST00000359060 OAS2P29728 719 aaKnown RBP12.41□□□□□ -0.42
SSU72-202ENST00000359060 UBXN2AP68543 259 aa12.41□□□□□ -0.42
SSU72-202ENST00000359060 AMIGO3Q86WK7 504 aa12.41□□□□□ -0.42
SSU72-202ENST00000359060 KIFC2Q96AC6 838 aa12.41□□□□□ -0.42
SSU72-202ENST00000359060 KANSL2Q9H9L4 492 aa12.41□□□□□ -0.42
SSU72-202ENST00000359060 DDX39AO00148 427 aaKnown RBP12.4□□□□□ -0.42
SSU72-202ENST00000359060 TADA3O75528 432 aa12.4□□□□□ -0.42
SSU72-202ENST00000359060 PNMA6AP0CW24 399 aaPredicted RBP12.4□□□□□ -0.42
SSU72-202ENST00000359060 GABPB1Q06547 395 aaPredicted RBP12.4□□□□□ -0.42
SSU72-202ENST00000359060 SMC1AQ14683 1233 aaKnown RBP12.4□□□□□ -0.42
SSU72-202ENST00000359060 HDXQ7Z353 690 aa12.4□□□□□ -0.42
SSU72-202ENST00000359060 SP8Q8IXZ3 490 aa12.4□□□□□ -0.42
SSU72-202ENST00000359060 ZFP91Q96JP5 570 aaPredicted RBP12.4□□□□□ -0.42
SSU72-202ENST00000359060 HOXA13P31271 388 aaPredicted RBP12.4□□□□□ -0.42
SSU72-202ENST00000359060 TUBB2AQ13885 445 aa12.4□□□□□ -0.42
SSU72-202ENST00000359060 TNIP1Q15025 636 aa12.4□□□□□ -0.42
SSU72-202ENST00000359060 CDC37Q16543 378 aaPredicted RBP12.4□□□□□ -0.42
SSU72-202ENST00000359060 CSRNP1Q96S65 589 aa12.4□□□□□ -0.42
SSU72-202ENST00000359060 TUBB2BQ9BVA1 445 aa12.4□□□□□ -0.42
SSU72-202ENST00000359060 LSM14BQ9BX40 385 aaKnown RBP12.4□□□□□ -0.42
SSU72-202ENST00000359060 AMNQ9BXJ7 453 aa12.4□□□□□ -0.42
SSU72-202ENST00000359060 NDST4Q9H3R1 872 aa12.4□□□□□ -0.42
SSU72-202ENST00000359060 PLEKHA4Q9H4M7 779 aa12.4□□□□□ -0.42
SSU72-202ENST00000359060 TDRD3Q9H7E2 651 aaKnown RBP12.4□□□□□ -0.42
SSU72-202ENST00000359060 L2HGDHQ9H9P8 463 aa12.4□□□□□ -0.42
SSU72-202ENST00000359060 MYH2Q9UKX2 1941 aa12.4□□□□□ -0.42
SSU72-202ENST00000359060 ADAMTS7Q9UKP4 1686 aa12.4□□□□□ -0.42
SSU72-202ENST00000359060 ZBTB5O15062 677 aa12.4□□□□□ -0.42
SSU72-202ENST00000359060 ADAMTS3O15072 1205 aa12.4□□□□□ -0.42
SSU72-202ENST00000359060 EEF2P13639 858 aaKnown RBP12.4□□□□□ -0.42
SSU72-202ENST00000359060 PRPHP41219 470 aa12.4□□□□□ -0.42
SSU72-202ENST00000359060 POLR2FP61218 127 aaKnown RBP12.4□□□□□ -0.42
SSU72-202ENST00000359060 ZBED6P86452 979 aa12.4□□□□□ -0.42
SSU72-202ENST00000359060 SF3B2Q13435 895 aaKnown RBP12.4□□□□□ -0.42
SSU72-202ENST00000359060 TPH2Q8IWU9 490 aa12.4□□□□□ -0.42
SSU72-202ENST00000359060 LARGE2Q8N3Y3 721 aa12.4□□□□□ -0.42
SSU72-202ENST00000359060 LRRC4BQ9NT99 713 aa12.4□□□□□ -0.42
SSU72-202ENST00000359060 PI4KBQ9UBF8 816 aa12.4□□□□□ -0.42
SSU72-202ENST00000359060 E9PMD0 336 aa12.4□□□□□ -0.43
SSU72-202ENST00000359060 GCNT3O95395 438 aa12.4□□□□□ -0.43
SSU72-202ENST00000359060 TM4SF1P30408 202 aa12.4□□□□□ -0.43
SSU72-202ENST00000359060 KCNB1Q14721 858 aa12.4□□□□□ -0.43
SSU72-202ENST00000359060 IL17AQ16552 155 aa12.4□□□□□ -0.43
SSU72-202ENST00000359060 WHAMMP3Q1A5X7 153 aa12.4□□□□□ -0.43
SSU72-202ENST00000359060 SLC9C1Q4G0N8 1177 aa12.4□□□□□ -0.43
SSU72-202ENST00000359060 CDKAL1Q5VV42 579 aa12.4□□□□□ -0.43
SSU72-202ENST00000359060 CRAMP1Q96RY5 1269 aa12.4□□□□□ -0.43
SSU72-202ENST00000359060 EHMT1Q9H9B1 1298 aa12.4□□□□□ -0.43
SSU72-202ENST00000359060 NHEJ1Q9H9Q4 299 aaPredicted RBP12.4□□□□□ -0.43
SSU72-202ENST00000359060 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.4□□□□□ -0.43
SSU72-202ENST00000359060 ST7Q9NRC1 585 aa12.4□□□□□ -0.43
SSU72-202ENST00000359060 TRIM10Q9UDY6 481 aa12.4□□□□□ -0.43
SSU72-202ENST00000359060 TFR2Q9UP52 801 aa12.4□□□□□ -0.43
SSU72-202ENST00000359060 PCDHB13Q9Y5F0 798 aa12.4□□□□□ -0.43
SSU72-202ENST00000359060 KDM3AQ9Y4C1 1321 aa12.4□□□□□ -0.43
SSU72-202ENST00000359060 BUB1O43683 1085 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 ZMYND10O75800 440 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 SLURP2P0DP57 97 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 QRICH1Q2TAL8 776 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 SH3RF1Q7Z6J0 888 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 CPXCR1Q8N123 301 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 ARHGEF10LQ9HCE6 1279 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 AGPAT5Q9NUQ2 364 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 MRFAP1Q9Y605 127 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 PDS5AQ29RF7 1337 aaKnown RBP12.39□□□□□ -0.43
SSU72-202ENST00000359060 hCG_1984214I3L0E3 225 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 RHOBTB3O94955 611 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 ZNF543Q08ER8 600 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 ADAM9Q13443 819 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 HLTFQ14527 1009 aaKnown RBP eCLIP12.39□□□□□ -0.43
SSU72-202ENST00000359060 MAN2A1Q16706 1144 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 PTPROQ16827 1216 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 UNC13DQ70J99 1090 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 ZNF713Q8N859 430 aaPredicted RBP12.39□□□□□ -0.43
SSU72-202ENST00000359060 ANO3Q9BYT9 981 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 SRGAP2O75044 1071 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 GH2P01242 217 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 PMS1P54277 932 aaKnown RBP12.39□□□□□ -0.43
SSU72-202ENST00000359060 NFIAQ12857 509 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 PRPF4BQ13523 1007 aaKnown RBP12.39□□□□□ -0.43
SSU72-202ENST00000359060 LONRF2Q1L5Z9 754 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 CDC42EP5Q6NZY7 148 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 TRIM65Q6PJ69 517 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 SHISA4Q96DD7 197 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 TSGA10Q9BZW7 698 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 ATP6V0A2Q9Y487 856 aa12.39□□□□□ -0.43
SSU72-202ENST00000359060 POTEB3A0JP26 581 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 POTECB2RU33 542 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 FGRP09769 529 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 PLA2G4BP0C869 781 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 KLK7P49862 253 aa12.38□□□□□ -0.43
SSU72-202ENST00000359060 FKBP3Q00688 224 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms