RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 ALDH1B1P30837 517 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 KIF11P52732 1056 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 ITIH3Q06033 890 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 ARL6IP4Q66PJ3 421 aaKnown RBP15.01□□□□□ -0.01
VCP-201ENST00000358901 EPC1Q9H2F5 836 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 SSX2IPQ9Y2D8 614 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 LRRC7Q96NW7 1537 aa15□□□□□ -0.01
VCP-201ENST00000358901 ERVV-1B6SEH8 477 aa15□□□□□ -0.01
VCP-201ENST00000358901 CLIC2O15247 247 aa15□□□□□ -0.01
VCP-201ENST00000358901 THAP12O43422 761 aa15□□□□□ -0.01
VCP-201ENST00000358901 ATF7P17544 494 aaPredicted RBP15□□□□□ -0.01
VCP-201ENST00000358901 HNRNPH2P55795 449 aaKnown RBP15□□□□□ -0.01
VCP-201ENST00000358901 CASC4Q6P4E1 433 aa15□□□□□ -0.01
VCP-201ENST00000358901 MB21D1Q8N884 522 aa15□□□□□ -0.01
VCP-201ENST00000358901 THAP9Q9H5L6 903 aa15□□□□□ -0.01
VCP-201ENST00000358901 IQGAP3Q86VI3 1631 aa15□□□□□ -0.01
VCP-201ENST00000358901 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15□□□□□ -0.01
VCP-201ENST00000358901 PPIP5K2O43314 1243 aa15□□□□□ -0.01
VCP-201ENST00000358901 LRRN2O75325 713 aa15□□□□□ -0.01
VCP-201ENST00000358901 CLTAP09496 248 aa15□□□□□ -0.01
VCP-201ENST00000358901 PRKG1Q13976 671 aa15□□□□□ -0.01
VCP-201ENST00000358901 SDCCAG8Q86SQ7 713 aaPredicted RBP15□□□□□ -0.01
VCP-201ENST00000358901 C1orf112Q9NSG2 853 aa15□□□□□ -0.01
VCP-201ENST00000358901 SERPINB13Q9UIV8 391 aa15□□□□□ -0.01
VCP-201ENST00000358901 LEMD3Q9Y2U8 911 aa15□□□□□ -0.01
VCP-201ENST00000358901 ABCC3O15438 1527 aa15□□□□□ -0.01
VCP-201ENST00000358901 ANKARQ7Z5J8 1434 aa15□□□□□ -0.01
VCP-201ENST00000358901 TET3O43151 1660 aa15□□□□□ -0.01
VCP-201ENST00000358901 XDHP47989 1333 aa15□□□□□ -0.01
VCP-201ENST00000358901 PABPN1LA6NDY0 278 aaKnown RBP15□□□□□ -0.01
VCP-201ENST00000358901 MEIS1O00470 390 aa15□□□□□ -0.01
VCP-201ENST00000358901 CHGBP05060 677 aa15□□□□□ -0.01
VCP-201ENST00000358901 MECOMQ03112 1051 aa15□□□□□ -0.01
VCP-201ENST00000358901 SPATS2Q86XZ4 545 aaKnown RBP15□□□□□ -0.01
VCP-201ENST00000358901 AZI2Q9H6S1 392 aa15□□□□□ -0.01
VCP-201ENST00000358901 ZCCHC17Q9NP64 241 aaKnown RBP15□□□□□ -0.01
VCP-201ENST00000358901 ADAM21Q9UKJ8 722 aa15□□□□□ -0.01
VCP-201ENST00000358901 MRPL11Q9Y3B7 192 aaKnown RBP15□□□□□ -0.01
VCP-201ENST00000358901 DAAM1Q9Y4D1 1078 aa15□□□□□ -0.01
VCP-201ENST00000358901 N4BP1O75113 896 aaKnown RBP14.99□□□□□ -0.01
VCP-201ENST00000358901 GBP1P32455 592 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 SLC8A3P57103 927 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 TMTC3Q6ZXV5 915 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 OTUD6AQ7L8S5 288 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 FAM186BQ8IYM0 893 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 DEPTORQ8TB45 409 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 CCDC17Q96LX7 622 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 ATP8A1Q9Y2Q0 1164 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 ADCY10Q96PN6 1610 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 AFPP02771 609 aaKnown RBP14.99□□□□□ -0.01
VCP-201ENST00000358901 UBXN2AP68543 259 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 TSNAXIP1Q2TAA8 658 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 LGSNQ5TDP6 509 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 EMILIN3Q9NT22 766 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 TRIM49BA6NDI0 452 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 PGRMC1O00264 195 aaKnown RBP14.99□□□□□ -0.01
VCP-201ENST00000358901 PDE6CP51160 858 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 PLTPP55058 493 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 TSGA10IPQ3SY00 556 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 LRCH2Q5VUJ6 765 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 VTI1AQ96AJ9 217 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 PTPN22Q9Y2R2 807 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 PCDHA13Q9Y5I0 950 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 ANKRD65E5RJM6 399 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 FOXN1O15353 648 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 TEX33O43247 280 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 DAPK3O43293 454 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 TTLL1O95922 423 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 GCFC2P16383 781 aaKnown RBP14.99□□□□□ -0.01
VCP-201ENST00000358901 TBC1D10BQ4KMP7 808 aaPredicted RBP14.99□□□□□ -0.01
VCP-201ENST00000358901 CCDC13Q8IYE1 715 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 STAG1Q8WVM7 1258 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 IL25Q9H293 177 aa14.99□□□□□ -0.01
VCP-201ENST00000358901 INTS9Q9NV88 658 aaKnown RBP14.99□□□□□ -0.01
VCP-201ENST00000358901 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.99□□□□□ -0.01
VCP-201ENST00000358901 SCARF1Q14162 830 aa14.98□□□□□ -0.01
VCP-201ENST00000358901 CC2D1AQ6P1N0 951 aaPredicted RBP14.98□□□□□ -0.01
VCP-201ENST00000358901 SHC4Q6S5L8 630 aa14.98□□□□□ -0.01
VCP-201ENST00000358901 ZNF579Q8NAF0 562 aaKnown RBP14.98□□□□□ -0.01
VCP-201ENST00000358901 RAB3IL1Q8TBN0 382 aa14.98□□□□□ -0.01
VCP-201ENST00000358901 MICAL1Q8TDZ2 1067 aa14.98□□□□□ -0.01
VCP-201ENST00000358901 TEKT3Q9BXF9 490 aa14.98□□□□□ -0.01
VCP-201ENST00000358901 ANAPC4Q9UJX5 808 aa14.98□□□□□ -0.01
VCP-201ENST00000358901 SHROOM2Q13796 1616 aa14.98□□□□□ -0.01
VCP-201ENST00000358901 SETD1BQ9UPS6 1966 aaKnown RBP14.98□□□□□ -0.01
VCP-201ENST00000358901 LMNB1P20700 586 aa14.98□□□□□ -0.01
VCP-201ENST00000358901 LIG4P49917 911 aa14.98□□□□□ -0.01
VCP-201ENST00000358901 ABCB5Q2M3G0 1257 aa14.98□□□□□ -0.01
VCP-201ENST00000358901 BSPRYQ5W0U4 402 aa14.98□□□□□ -0.01
VCP-201ENST00000358901 DHX40Q8IX18 779 aaKnown RBP14.98□□□□□ -0.01
VCP-201ENST00000358901 TAB3Q8N5C8 712 aaPredicted RBP14.98□□□□□ -0.01
VCP-201ENST00000358901 GLG1Q92896 1179 aa14.98□□□□□ -0.01
VCP-201ENST00000358901 ZNF148Q9UQR1 794 aa14.98□□□□□ -0.01
VCP-201ENST00000358901 TCP10L2B9ZVM9 353 aa14.98□□□□□ -0.01
VCP-201ENST00000358901 I3L4J1 428 aa14.98□□□□□ -0.01
VCP-201ENST00000358901 MYO1FO00160 1098 aa14.98□□□□□ -0.01
VCP-201ENST00000358901 SRGAP2O75044 1071 aa14.98□□□□□ -0.01
VCP-201ENST00000358901 DGKHQ86XP1 1220 aa14.98□□□□□ -0.01
VCP-201ENST00000358901 PALM2Q8IXS6 379 aa14.98□□□□□ -0.01
VCP-201ENST00000358901 P3H4Q92791 437 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms