RNA–Protein interactions for RNA: ENST00000358572.9

TMA16-201, Transcript of translation machinery associated 16 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMA16, Length 1,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMA16-201ENST00000358572 NELFBQ8WX92 580 aa17.6■□□□□ 0.41
TMA16-201ENST00000358572 SH2D4AQ9H788 454 aa17.6■□□□□ 0.41
TMA16-201ENST00000358572 KCND1Q9NSA2 647 aa17.6■□□□□ 0.41
TMA16-201ENST00000358572 SREBF1P36956 1147 aa17.59■□□□□ 0.41
TMA16-201ENST00000358572 ARHGAP4P98171 946 aa17.59■□□□□ 0.41
TMA16-201ENST00000358572 AMPD3Q01432 767 aa17.59■□□□□ 0.41
TMA16-201ENST00000358572 TRAF1Q13077 416 aa17.59■□□□□ 0.41
TMA16-201ENST00000358572 TMEM119Q4V9L6 283 aa17.59■□□□□ 0.41
TMA16-201ENST00000358572 KRT79Q5XKE5 535 aa17.59■□□□□ 0.41
TMA16-201ENST00000358572 CHURC1Q8WUH1 139 aa17.59■□□□□ 0.41
TMA16-201ENST00000358572 GLIS2Q9BZE0 524 aaPredicted RBP17.59■□□□□ 0.41
TMA16-201ENST00000358572 RANBP17Q9H2T7 1088 aaKnown RBP17.59■□□□□ 0.41
TMA16-201ENST00000358572 PCDHA12Q9UN75 941 aa17.59■□□□□ 0.41
TMA16-201ENST00000358572 R3HCC1Q9Y3T6 440 aaKnown RBP17.59■□□□□ 0.41
TMA16-201ENST00000358572 LRRC10BA6NIK2 292 aa17.59■□□□□ 0.41
TMA16-201ENST00000358572 GMPSP49915 693 aaPredicted RBP17.59■□□□□ 0.41
TMA16-201ENST00000358572 TNFAIP1Q13829 316 aa17.59■□□□□ 0.41
TMA16-201ENST00000358572 ADD3Q9UEY8 706 aaKnown RBP17.59■□□□□ 0.41
TMA16-201ENST00000358572 TAL1P17542 331 aaPredicted RBP17.58■□□□□ 0.4
TMA16-201ENST00000358572 HYIQ5T013 277 aa17.58■□□□□ 0.4
TMA16-201ENST00000358572 SV2BQ7L1I2 683 aa17.58■□□□□ 0.4
TMA16-201ENST00000358572 SNX29Q8TEQ0 813 aa17.58■□□□□ 0.4
TMA16-201ENST00000358572 GJA10Q969M2 543 aa17.58■□□□□ 0.4
TMA16-201ENST00000358572 TMX1Q9H3N1 280 aa17.58■□□□□ 0.4
TMA16-201ENST00000358572 MAPK8IP1Q9UQF2 711 aa17.58■□□□□ 0.4
TMA16-201ENST00000358572 CIITAP33076 1130 aa17.57■□□□□ 0.4
TMA16-201ENST00000358572 KCNJ6P48051 423 aa17.57■□□□□ 0.4
TMA16-201ENST00000358572 RASSF7Q02833 373 aa17.57■□□□□ 0.4
TMA16-201ENST00000358572 Q4G0T1 1027 aa17.57■□□□□ 0.4
TMA16-201ENST00000358572 DNTTIP2Q5QJE6 756 aaKnown RBP17.57■□□□□ 0.4
TMA16-201ENST00000358572 SPECC1LQ69YQ0 1117 aa17.57■□□□□ 0.4
TMA16-201ENST00000358572 CNNM4Q6P4Q7 775 aa17.57■□□□□ 0.4
TMA16-201ENST00000358572 FAM160B2Q86V87 743 aa17.57■□□□□ 0.4
TMA16-201ENST00000358572 MICALL2Q8IY33 904 aa17.57■□□□□ 0.4
TMA16-201ENST00000358572 CTAGE1Q96RT6 745 aa17.57■□□□□ 0.4
TMA16-201ENST00000358572 GTPBP4Q9BZE4 634 aaKnown RBP17.57■□□□□ 0.4
TMA16-201ENST00000358572 LIMA1Q9UHB6 759 aaKnown RBP17.57■□□□□ 0.4
TMA16-201ENST00000358572 SCAF8Q9UPN6 1271 aaKnown RBP17.57■□□□□ 0.4
TMA16-201ENST00000358572 SPDYE3A6NKU9 549 aa17.57■□□□□ 0.4
TMA16-201ENST00000358572 SLC26A4O43511 780 aa17.57■□□□□ 0.4
TMA16-201ENST00000358572 COBLO75128 1261 aa17.57■□□□□ 0.4
TMA16-201ENST00000358572 ECM1Q16610 540 aa17.57■□□□□ 0.4
TMA16-201ENST00000358572 PTPN21Q16825 1174 aa17.57■□□□□ 0.4
TMA16-201ENST00000358572 SLFN12Q8IYM2 578 aa17.57■□□□□ 0.4
TMA16-201ENST00000358572 ETNPPLQ8TBG4 499 aa17.57■□□□□ 0.4
TMA16-201ENST00000358572 LARP4BQ92615 738 aaKnown RBP17.57■□□□□ 0.4
TMA16-201ENST00000358572 RAD54LQ92698 747 aa17.57■□□□□ 0.4
TMA16-201ENST00000358572 LENG9Q96B70 501 aa17.57■□□□□ 0.4
TMA16-201ENST00000358572 CDK5RAP3Q96JB5 506 aa17.57■□□□□ 0.4
TMA16-201ENST00000358572 MYMKA6NI61 221 aa17.56■□□□□ 0.4
TMA16-201ENST00000358572 H7C1D1 291 aa17.56■□□□□ 0.4
TMA16-201ENST00000358572 TBX3O15119 743 aa17.56■□□□□ 0.4
TMA16-201ENST00000358572 CYP3A4P08684 503 aa17.56■□□□□ 0.4
TMA16-201ENST00000358572 PBX1P40424 430 aa17.56■□□□□ 0.4
TMA16-201ENST00000358572 ASIC1P78348 528 aa17.56■□□□□ 0.4
TMA16-201ENST00000358572 MCM6Q14566 821 aa17.56■□□□□ 0.4
TMA16-201ENST00000358572 COBLL1Q53SF7 1204 aa17.56■□□□□ 0.4
TMA16-201ENST00000358572 SAMD7Q7Z3H4 446 aa17.56■□□□□ 0.4
TMA16-201ENST00000358572 KCNK18Q7Z418 384 aa17.56■□□□□ 0.4
TMA16-201ENST00000358572 DHTKD1Q96HY7 919 aaPredicted RBP17.56■□□□□ 0.4
TMA16-201ENST00000358572 GINM1Q9NU53 330 aa17.56■□□□□ 0.4
TMA16-201ENST00000358572 CNOT7Q9UIV1 285 aaKnown RBP17.56■□□□□ 0.4
TMA16-201ENST00000358572 FEM1BQ9UK73 627 aa17.56■□□□□ 0.4
TMA16-201ENST00000358572 ASTN2O75129 1339 aaPredicted RBP17.56■□□□□ 0.4
TMA16-201ENST00000358572 PVALEFA0A1B0GWK0 134 aa17.55■□□□□ 0.4
TMA16-201ENST00000358572 FAM86B1E9PN63 330 aa17.55■□□□□ 0.4
TMA16-201ENST00000358572 TEX33O43247 280 aa17.55■□□□□ 0.4
TMA16-201ENST00000358572 MARCH6O60337 910 aa17.55■□□□□ 0.4
TMA16-201ENST00000358572 FAM86B2P0C5J1 330 aa17.55■□□□□ 0.4
TMA16-201ENST00000358572 HOXA13P31271 388 aaPredicted RBP17.55■□□□□ 0.4
TMA16-201ENST00000358572 PMS1P54277 932 aaKnown RBP17.55■□□□□ 0.4
TMA16-201ENST00000358572 PDE4DQ08499 809 aa17.55■□□□□ 0.4
TMA16-201ENST00000358572 TPD52L1Q16890 204 aaPredicted RBP17.55■□□□□ 0.4
TMA16-201ENST00000358572 CCDC84Q86UT8 332 aaPredicted RBP17.55■□□□□ 0.4
TMA16-201ENST00000358572 CCDC47Q96A33 483 aaKnown RBP17.55■□□□□ 0.4
TMA16-201ENST00000358572 KIFC2Q96AC6 838 aa17.55■□□□□ 0.4
TMA16-201ENST00000358572 SPAG1Q07617 926 aa17.55■□□□□ 0.4
TMA16-201ENST00000358572 STK4Q13043 487 aa17.55■□□□□ 0.4
TMA16-201ENST00000358572 STIM1Q13586 685 aa17.55■□□□□ 0.4
TMA16-201ENST00000358572 ZYXQ15942 572 aaKnown RBP17.55■□□□□ 0.4
TMA16-201ENST00000358572 IRF2BP1Q8IU81 584 aa17.55■□□□□ 0.4
TMA16-201ENST00000358572 CCAR2Q8N163 923 aaKnown RBP17.55■□□□□ 0.4
TMA16-201ENST00000358572 CCDC112Q8NEF3 446 aa17.55■□□□□ 0.4
TMA16-201ENST00000358572 EXOC1Q9NV70 894 aa17.55■□□□□ 0.4
TMA16-201ENST00000358572 USP27XA6NNY8 438 aa17.54■□□□□ 0.4
TMA16-201ENST00000358572 PSMA7O14818 248 aa17.54■□□□□ 0.4
TMA16-201ENST00000358572 PPP1R2P41236 205 aa17.54■□□□□ 0.4
TMA16-201ENST00000358572 SPIRE1Q08AE8 756 aa17.54■□□□□ 0.4
TMA16-201ENST00000358572 KRT31Q15323 416 aa17.54■□□□□ 0.4
TMA16-201ENST00000358572 PRR16Q569H4 304 aa17.54■□□□□ 0.4
TMA16-201ENST00000358572 TCP11X2Q5H9J9 407 aa17.54■□□□□ 0.4
TMA16-201ENST00000358572 E4F1Q66K89 784 aaPredicted RBP17.54■□□□□ 0.4
TMA16-201ENST00000358572 TTI2Q6NXR4 508 aa17.54■□□□□ 0.4
TMA16-201ENST00000358572 UNC13DQ70J99 1090 aa17.54■□□□□ 0.4
TMA16-201ENST00000358572 ZNF341Q9BYN7 854 aa17.54■□□□□ 0.4
TMA16-201ENST00000358572 LRRC27Q9C0I9 530 aa17.54■□□□□ 0.4
TMA16-201ENST00000358572 FBXO28Q9NVF7 368 aa17.54■□□□□ 0.4
TMA16-201ENST00000358572 HACL1Q9UJ83 578 aa17.54■□□□□ 0.4
TMA16-201ENST00000358572 GJA3Q9Y6H8 435 aa17.54■□□□□ 0.4
TMA16-201ENST00000358572 TRIM49BA6NDI0 452 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms