RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 IFIH1Q9BYX4 1025 aaKnown RBP11.02□□□□□ -0.65
RNF40-202ENST00000357890 LUC7LQ9NQ29 371 aaKnown RBP11.02□□□□□ -0.65
RNF40-202ENST00000357890 ATP8A2Q9NTI2 1148 aa11.02□□□□□ -0.65
RNF40-202ENST00000357890 AHDC1Q5TGY3 1603 aaPredicted RBP11.02□□□□□ -0.65
RNF40-202ENST00000357890 A0A087X0B3 334 aa11.02□□□□□ -0.65
RNF40-202ENST00000357890 PP2D1A8MPX8 630 aa11.02□□□□□ -0.65
RNF40-202ENST00000357890 SEMA3EO15041 775 aa11.02□□□□□ -0.65
RNF40-202ENST00000357890 CCNT1O60563 726 aaKnown RBP11.02□□□□□ -0.65
RNF40-202ENST00000357890 SLC8A1P32418 973 aa11.02□□□□□ -0.65
RNF40-202ENST00000357890 PCK1P35558 622 aa11.02□□□□□ -0.65
RNF40-202ENST00000357890 PAK2Q13177 524 aa11.02□□□□□ -0.65
RNF40-202ENST00000357890 FAM133BQ5BKY9 247 aaKnown RBP11.02□□□□□ -0.65
RNF40-202ENST00000357890 RASGRP2Q7LDG7 609 aa11.02□□□□□ -0.65
RNF40-202ENST00000357890 TBC1D1Q86TI0 1168 aaPredicted RBP11.02□□□□□ -0.65
RNF40-202ENST00000357890 TUBGCP2Q9BSJ2 902 aa11.02□□□□□ -0.65
RNF40-202ENST00000357890 LRRC1Q9BTT6 524 aa11.02□□□□□ -0.65
RNF40-202ENST00000357890 ANAPC4Q9UJX5 808 aa11.02□□□□□ -0.65
RNF40-202ENST00000357890 PKD1L3Q7Z443 1732 aa11.02□□□□□ -0.65
RNF40-202ENST00000357890 BICDL2A1A5D9 508 aa11.02□□□□□ -0.65
RNF40-202ENST00000357890 CLSTN1O94985 981 aa11.02□□□□□ -0.65
RNF40-202ENST00000357890 NTSR2O95665 410 aa11.02□□□□□ -0.65
RNF40-202ENST00000357890 GOLGA8HP0CJ92 632 aa11.02□□□□□ -0.65
RNF40-202ENST00000357890 MYBL1P10243 752 aa11.02□□□□□ -0.65
RNF40-202ENST00000357890 CDC25CP30307 473 aa11.02□□□□□ -0.65
RNF40-202ENST00000357890 SARSP49591 514 aaKnown RBP11.02□□□□□ -0.65
RNF40-202ENST00000357890 DPYDQ12882 1025 aa11.02□□□□□ -0.65
RNF40-202ENST00000357890 RBBP5Q15291 538 aaKnown RBP11.02□□□□□ -0.65
RNF40-202ENST00000357890 TPTE2Q6XPS3 522 aa11.02□□□□□ -0.65
RNF40-202ENST00000357890 C2CD5Q86YS7 1000 aa11.02□□□□□ -0.65
RNF40-202ENST00000357890 LDHCP07864 332 aa11.01□□□□□ -0.65
RNF40-202ENST00000357890 DNM2P50570 870 aa11.01□□□□□ -0.65
RNF40-202ENST00000357890 SEC23AQ15436 765 aa11.01□□□□□ -0.65
RNF40-202ENST00000357890 NT5DC1Q5TFE4 455 aa11.01□□□□□ -0.65
RNF40-202ENST00000357890 INTS5Q6P9B9 1019 aaKnown RBP11.01□□□□□ -0.65
RNF40-202ENST00000357890 UHMK1Q8TAS1 419 aaKnown RBP11.01□□□□□ -0.65
RNF40-202ENST00000357890 SLC40A1Q9NP59 571 aa11.01□□□□□ -0.65
RNF40-202ENST00000357890 RAB21Q9UL25 225 aa11.01□□□□□ -0.65
RNF40-202ENST00000357890 MINPP1Q9UNW1 487 aa11.01□□□□□ -0.65
RNF40-202ENST00000357890 HEXIM1O94992 359 aaKnown RBP11.01□□□□□ -0.65
RNF40-202ENST00000357890 SYF2O95926 243 aaKnown RBP11.01□□□□□ -0.65
RNF40-202ENST00000357890 CTNNA1P35221 906 aaKnown RBP11.01□□□□□ -0.65
RNF40-202ENST00000357890 TXKP42681 527 aa11.01□□□□□ -0.65
RNF40-202ENST00000357890 EPHB4P54760 987 aa11.01□□□□□ -0.65
RNF40-202ENST00000357890 HDLBPQ00341 1268 aaKnown RBP11.01□□□□□ -0.65
RNF40-202ENST00000357890 EZH2Q15910 746 aaKnown RBP11.01□□□□□ -0.65
RNF40-202ENST00000357890 SWT1Q5T5J6 900 aaKnown RBP11.01□□□□□ -0.65
RNF40-202ENST00000357890 GKAP1Q5VSY0 366 aaPredicted RBP11.01□□□□□ -0.65
RNF40-202ENST00000357890 CLEC4GQ6UXB4 293 aa11.01□□□□□ -0.65
RNF40-202ENST00000357890 DYMQ7RTS9 669 aa11.01□□□□□ -0.65
RNF40-202ENST00000357890 PNMA1Q8ND90 353 aa11.01□□□□□ -0.65
RNF40-202ENST00000357890 BMP2KQ9NSY1 1161 aaPredicted RBP11.01□□□□□ -0.65
RNF40-202ENST00000357890 MYO1AQ9UBC5 1043 aa11.01□□□□□ -0.65
RNF40-202ENST00000357890 COL18A1P39060 1754 aa11.01□□□□□ -0.65
RNF40-202ENST00000357890 A6NNZ2 444 aa11.01□□□□□ -0.65
RNF40-202ENST00000357890 PPP1R3GB7ZBB8 358 aa11.01□□□□□ -0.65
RNF40-202ENST00000357890 MOCS3O95396 460 aa11.01□□□□□ -0.65
RNF40-202ENST00000357890 LDHBP07195 334 aaKnown RBP11.01□□□□□ -0.65
RNF40-202ENST00000357890 GCFC2P16383 781 aaKnown RBP11.01□□□□□ -0.65
RNF40-202ENST00000357890 MAGEA1P43355 309 aa11.01□□□□□ -0.65
RNF40-202ENST00000357890 TUBB8Q3ZCM7 444 aa11.01□□□□□ -0.65
RNF40-202ENST00000357890 SPATS2Q86XZ4 545 aaKnown RBP11.01□□□□□ -0.65
RNF40-202ENST00000357890 CCDC63Q8NA47 563 aa11.01□□□□□ -0.65
RNF40-202ENST00000357890 SAMD15Q9P1V8 674 aa11.01□□□□□ -0.65
RNF40-202ENST00000357890 LRWD1Q9UFC0 647 aa11.01□□□□□ -0.65
RNF40-202ENST00000357890 PPP1R12AO14974 1030 aaPredicted RBP11□□□□□ -0.65
RNF40-202ENST00000357890 LONP1P36776 959 aaKnown RBP11□□□□□ -0.65
RNF40-202ENST00000357890 IFNAR2P48551 515 aa11□□□□□ -0.65
RNF40-202ENST00000357890 GSTO1P78417 241 aa11□□□□□ -0.65
RNF40-202ENST00000357890 MECOMQ03112 1051 aa11□□□□□ -0.65
RNF40-202ENST00000357890 CCNI2Q6ZMN8 369 aaPredicted RBP11□□□□□ -0.65
RNF40-202ENST00000357890 NLRP14Q86W24 1093 aa11□□□□□ -0.65
RNF40-202ENST00000357890 ARMC2Q8NEN0 867 aa11□□□□□ -0.65
RNF40-202ENST00000357890 ZNF473Q8WTR7 871 aaKnown RBP11□□□□□ -0.65
RNF40-202ENST00000357890 ZBTB10Q96DT7 871 aa11□□□□□ -0.65
RNF40-202ENST00000357890 UIMC1Q96RL1 719 aa11□□□□□ -0.65
RNF40-202ENST00000357890 CCT8L2Q96SF2 557 aa11□□□□□ -0.65
RNF40-202ENST00000357890 KRT12Q99456 494 aa11□□□□□ -0.65
RNF40-202ENST00000357890 KIF9Q9HAQ2 790 aa11□□□□□ -0.65
RNF40-202ENST00000357890 EHD2Q9NZN4 543 aa11□□□□□ -0.65
RNF40-202ENST00000357890 SAP30BPQ9UHR5 308 aaKnown RBP11□□□□□ -0.65
RNF40-202ENST00000357890 ADGRA1Q86SQ6 560 aa11□□□□□ -0.65
RNF40-202ENST00000357890 CABP7Q86V35 215 aa11□□□□□ -0.65
RNF40-202ENST00000357890 CCDC13Q8IYE1 715 aa11□□□□□ -0.65
RNF40-202ENST00000357890 FAM84BQ96KN1 310 aaPredicted RBP11□□□□□ -0.65
RNF40-202ENST00000357890 XIRP1Q702N8 1843 aaKnown RBP11□□□□□ -0.65
RNF40-202ENST00000357890 CYP2D6P10635 497 aa11□□□□□ -0.65
RNF40-202ENST00000357890 LSP1P33241 339 aa11□□□□□ -0.65
RNF40-202ENST00000357890 ERVK-24P63145 666 aa11□□□□□ -0.65
RNF40-202ENST00000357890 ATP2C1P98194 919 aaPredicted RBP11□□□□□ -0.65
RNF40-202ENST00000357890 TROAPQ12815 778 aa11□□□□□ -0.65
RNF40-202ENST00000357890 ZKSCAN8Q15776 578 aaPredicted RBP11□□□□□ -0.65
RNF40-202ENST00000357890 TMEM266Q2M3C6 531 aa11□□□□□ -0.65
RNF40-202ENST00000357890 GNPTABQ3T906 1256 aa11□□□□□ -0.65
RNF40-202ENST00000357890 SRBD1Q8N5C6 995 aaKnown RBP11□□□□□ -0.65
RNF40-202ENST00000357890 MB21D1Q8N884 522 aa11□□□□□ -0.65
RNF40-202ENST00000357890 ZKSCAN4Q969J2 545 aaPredicted RBP11□□□□□ -0.65
RNF40-202ENST00000357890 VIPAS39Q9H9C1 493 aa11□□□□□ -0.65
RNF40-202ENST00000357890 SLC39A2Q9NP94 309 aa11□□□□□ -0.65
RNF40-202ENST00000357890 SEPT11Q9NVA2 429 aaKnown RBP11□□□□□ -0.65
RNF40-202ENST00000357890 KCNG1Q9UIX4 513 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms