RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 MRPL47Q9HD33 250 aaKnown RBP7.03□□□□□ -1.28
UPF2-201ENST00000356352 DISC1Q9NRI5 854 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 MCF2LO15068 1137 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 JAK2O60674 1132 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 CPP00450 1065 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 SERPINB6P35237 376 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 ARL4AP40617 200 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 ADKP55263 362 aaKnown RBP7.03□□□□□ -1.28
UPF2-201ENST00000356352 POLA2Q14181 598 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 C4orf50Q6ZRC1 276 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 ARMC9Q7Z3E5 817 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 NDUFAF2Q8N183 169 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 PRPF38AQ8NAV1 312 aaKnown RBP7.03□□□□□ -1.28
UPF2-201ENST00000356352 SLC7A3Q8WY07 619 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 CALR3Q96L12 384 aaKnown RBP7.03□□□□□ -1.28
UPF2-201ENST00000356352 TTC25Q96NG3 672 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 TESK2Q96S53 571 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 SUGCTQ9HAC7 445 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 RNF14Q9UBS8 474 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 SEPT9Q9UHD8 586 aaPredicted RBP7.03□□□□□ -1.28
UPF2-201ENST00000356352 CPSF3Q9UKF6 684 aaKnown RBP7.03□□□□□ -1.28
UPF2-201ENST00000356352 PPP1R9AQ9ULJ8 1098 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 PCDHA4Q9UN74 947 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 A0A1W2PQ27 194 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 A0A1W2PQ64 194 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 A0A1W2PQD8 194 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 TMEM232C9JQI7 657 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 AFPP02771 609 aaKnown RBP7.03□□□□□ -1.28
UPF2-201ENST00000356352 PDE6AP16499 860 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 PDE1CQ14123 709 aaPredicted RBP7.03□□□□□ -1.28
UPF2-201ENST00000356352 NLGN1Q8N2Q7 840 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 GSDMAQ96QA5 445 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 GCNAQ96QF7 691 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 FOXP1Q9H334 677 aaPredicted RBP7.03□□□□□ -1.28
UPF2-201ENST00000356352 PRKAG2Q9UGJ0 569 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 ZNF215Q9UL58 517 aaPredicted RBP7.03□□□□□ -1.28
UPF2-201ENST00000356352 ZNF608Q9ULD9 1512 aaPredicted RBP7.03□□□□□ -1.28
UPF2-201ENST00000356352 TCP10L2B9ZVM9 353 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 SGK1O00141 431 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 ATP8B1O43520 1251 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 BUB1O43683 1085 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 BAG2O95816 211 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 ZSCAN20P17040 1043 aaPredicted RBP7.03□□□□□ -1.28
UPF2-201ENST00000356352 IFRD2Q12894 506 aaPredicted RBP7.03□□□□□ -1.28
UPF2-201ENST00000356352 THOC5Q13769 683 aaKnown RBP7.03□□□□□ -1.28
UPF2-201ENST00000356352 ME3Q16798 604 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 LRCH2Q5VUJ6 765 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 TMTC3Q6ZXV5 915 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 CARD14Q9BXL6 1004 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 TRIM15Q9C019 465 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 LMBRD1Q9NUN5 540 aa7.03□□□□□ -1.28
UPF2-201ENST00000356352 WDR64B1ANS9 1081 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 HNRNPDLO14979 420 aaKnown RBP7.02□□□□□ -1.29
UPF2-201ENST00000356352 ANXA13P27216 316 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 COPB1P53618 953 aaKnown RBP7.02□□□□□ -1.29
UPF2-201ENST00000356352 MYO1EQ12965 1108 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 SUPT20HL1Q3ZLR7 823 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 EP400NLQ6ZTU2 488 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 DPP9Q86TI2 863 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 STAG1Q8WVM7 1258 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 ATP6V1E2Q96A05 226 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 DPH5Q9H2P9 285 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 SLC38A10Q9HBR0 1119 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 ZSWIM6Q9HCJ5 1215 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 DONSONQ9NYP3 566 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 BCS1LQ9Y276 419 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 MAPKBP1O60336 1514 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 RGS12O14924 1447 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 MLH3Q9UHC1 1453 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 PNMA6EA0A0J9YXQ4 647 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 PPEF1O14829 653 aaPredicted RBP7.02□□□□□ -1.29
UPF2-201ENST00000356352 GSTA4O15217 222 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 LRRC47Q8N1G4 583 aaKnown RBP7.02□□□□□ -1.29
UPF2-201ENST00000356352 OTUD7AQ8TE49 926 aaPredicted RBP7.02□□□□□ -1.29
UPF2-201ENST00000356352 LARP4BQ92615 738 aaKnown RBP7.02□□□□□ -1.29
UPF2-201ENST00000356352 DHX38Q92620 1227 aaKnown RBP7.02□□□□□ -1.29
UPF2-201ENST00000356352 SPDL1Q96EA4 605 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 CNOT6LQ96LI5 555 aaKnown RBP7.02□□□□□ -1.29
UPF2-201ENST00000356352 ZNF577Q9BSK1 485 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 KIF9Q9HAQ2 790 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 PPME1Q9Y570 386 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 CAPN7Q9Y6W3 813 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 GNGT2O14610 69 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 TTLL1O95922 423 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 ATP6V1E1P36543 226 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 ZBTB17Q13105 803 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 GPR162Q16538 588 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 TTBK2Q6IQ55 1244 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 ARHGEF18Q6ZSZ5 1173 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 BZW1Q7L1Q6 419 aaKnown RBP7.02□□□□□ -1.29
UPF2-201ENST00000356352 RSRC2Q7L4I2 434 aaKnown RBP7.02□□□□□ -1.29
UPF2-201ENST00000356352 SSH3Q8TE77 659 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 SYMPKQ92797 1274 aaKnown RBP7.02□□□□□ -1.29
UPF2-201ENST00000356352 CHMP6Q96FZ7 201 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 LGR6Q9HBX8 967 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 AKT3Q9Y243 479 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 PCDHA1Q9Y5I3 950 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 SPECC1L-ADORA2AF8WAN1 911 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 MAPK4P31152 587 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 SNCBQ16143 134 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms