RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 PAK2Q13177 524 aa15.5■□□□□ 0.07
SREBF1-202ENST00000355815 SETDB1Q15047 1291 aa15.5■□□□□ 0.07
SREBF1-202ENST00000355815 CNNM4Q6P4Q7 775 aa15.5■□□□□ 0.07
SREBF1-202ENST00000355815 ANKRD7Q92527 254 aa15.5■□□□□ 0.07
SREBF1-202ENST00000355815 PCDHA12Q9UN75 941 aa15.5■□□□□ 0.07
SREBF1-202ENST00000355815 OVOS2A0A0G2JMS6 1433 aa15.5■□□□□ 0.07
SREBF1-202ENST00000355815 PIK3C2AO00443 1686 aa15.49■□□□□ 0.07
SREBF1-202ENST00000355815 MEIS1O00470 390 aa15.49■□□□□ 0.07
SREBF1-202ENST00000355815 CYP2C19P33261 490 aa15.49■□□□□ 0.07
SREBF1-202ENST00000355815 IFI16Q16666 785 aaKnown RBP15.49■□□□□ 0.07
SREBF1-202ENST00000355815 PRR16Q569H4 304 aa15.49■□□□□ 0.07
SREBF1-202ENST00000355815 STIM2Q9P246 746 aa15.49■□□□□ 0.07
SREBF1-202ENST00000355815 CPXCR1Q8N123 301 aa15.49■□□□□ 0.07
SREBF1-202ENST00000355815 CNOT6LQ96LI5 555 aaKnown RBP15.49■□□□□ 0.07
SREBF1-202ENST00000355815 MXD3Q9BW11 206 aa15.49■□□□□ 0.07
SREBF1-202ENST00000355815 BRIP1Q9BX63 1249 aa15.49■□□□□ 0.07
SREBF1-202ENST00000355815 DPH5Q9H2P9 285 aa15.49■□□□□ 0.07
SREBF1-202ENST00000355815 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.49■□□□□ 0.07
SREBF1-202ENST00000355815 FAM114A2Q9NRY5 505 aa15.49■□□□□ 0.07
SREBF1-202ENST00000355815 FAM169AQ9Y6X4 670 aa15.49■□□□□ 0.07
SREBF1-202ENST00000355815 SLIT1O75093 1534 aa15.49■□□□□ 0.07
SREBF1-202ENST00000355815 PPFIA4O75335 1185 aa15.49■□□□□ 0.07
SREBF1-202ENST00000355815 H7C1D1 291 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 TUBB2AQ13885 445 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 NCAPHQ15003 741 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 NAA35Q5VZE5 725 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 LMNTD2Q8IXW0 634 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 PPP1R14CQ8TAE6 165 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 TUBB2BQ9BVA1 445 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 PSTPIP2Q9H939 334 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 PCDHB13Q9Y5F0 798 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 FOXP2O15409 715 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 GDF11O95390 407 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 PLCB3Q01970 1234 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 TXNRD1Q16881 649 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 HIBCHQ6NVY1 386 aaPredicted RBP15.48■□□□□ 0.07
SREBF1-202ENST00000355815 CEP95Q96GE4 821 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 CHP1Q99653 195 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 TUBE1Q9UJT0 475 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 VIRMAQ69YN4 1812 aaKnown RBP15.48■□□□□ 0.07
SREBF1-202ENST00000355815 FXR1P51114 621 aaKnown RBP eCLIP15.48■□□□□ 0.07
SREBF1-202ENST00000355815 MON2Q7Z3U7 1717 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 LONP1P36776 959 aaKnown RBP15.48■□□□□ 0.07
SREBF1-202ENST00000355815 NEDD9Q14511 834 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 SNCBQ16143 134 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 FBXW10Q5XX13 1052 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 CCDC174Q6PII3 467 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 SRLQ86TD4 932 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 PPFIBP2Q8ND30 876 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 MAP3K14Q99558 947 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 KIAA1024Q9UPX6 916 aa15.48■□□□□ 0.07
SREBF1-202ENST00000355815 XDHP47989 1333 aa15.47■□□□□ 0.07
SREBF1-202ENST00000355815 ATP8B1O43520 1251 aa15.47■□□□□ 0.07
SREBF1-202ENST00000355815 TFRCP02786 760 aaKnown RBP15.47■□□□□ 0.07
SREBF1-202ENST00000355815 ZNF131P52739 623 aa15.47■□□□□ 0.07
SREBF1-202ENST00000355815 PFKFB3Q16875 520 aaPredicted RBP15.47■□□□□ 0.07
SREBF1-202ENST00000355815 CLEC4GQ6UXB4 293 aa15.47■□□□□ 0.07
SREBF1-202ENST00000355815 TMEM60Q9H2L4 133 aa15.47■□□□□ 0.07
SREBF1-202ENST00000355815 HDAC6Q9UBN7 1215 aa15.47■□□□□ 0.07
SREBF1-202ENST00000355815 PHLPP2Q6ZVD8 1323 aa15.47■□□□□ 0.07
SREBF1-202ENST00000355815 TCRBV5S4A2TA0A5A2 114 aa15.47■□□□□ 0.07
SREBF1-202ENST00000355815 FCER1AP12319 257 aa15.47■□□□□ 0.07
SREBF1-202ENST00000355815 CD44P16070 742 aaKnown RBP15.47■□□□□ 0.07
SREBF1-202ENST00000355815 FGFR2P21802 821 aa15.47■□□□□ 0.07
SREBF1-202ENST00000355815 ADCY1Q08828 1119 aa15.47■□□□□ 0.07
SREBF1-202ENST00000355815 C2orf54Q08AI8 447 aa15.47■□□□□ 0.07
SREBF1-202ENST00000355815 TROAPQ12815 778 aa15.47■□□□□ 0.07
SREBF1-202ENST00000355815 LLGL1Q15334 1064 aa15.47■□□□□ 0.07
SREBF1-202ENST00000355815 NOX5Q96PH1 765 aa15.47■□□□□ 0.07
SREBF1-202ENST00000355815 MRPL44Q9H9J2 332 aaKnown RBP15.47■□□□□ 0.07
SREBF1-202ENST00000355815 TRIM10Q9UDY6 481 aa15.47■□□□□ 0.07
SREBF1-202ENST00000355815 PCDHA1Q9Y5I3 950 aa15.47■□□□□ 0.07
SREBF1-202ENST00000355815 CCDC38Q502W7 563 aa15.47■□□□□ 0.07
SREBF1-202ENST00000355815 RUFY4Q6ZNE9 571 aa15.47■□□□□ 0.07
SREBF1-202ENST00000355815 DISC1Q9NRI5 854 aa15.47■□□□□ 0.07
SREBF1-202ENST00000355815 NARFQ9UHQ1 456 aa15.47■□□□□ 0.07
SREBF1-202ENST00000355815 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.47■□□□□ 0.077e-7■■■□□ 17.9
SREBF1-202ENST00000355815 RPS6KA4O75676 772 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 CFAP221Q4G0U5 840 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 ZNF658Q5TYW1 1059 aaPredicted RBP15.46■□□□□ 0.07
SREBF1-202ENST00000355815 RIN2Q8WYP3 895 aaPredicted RBP15.46■□□□□ 0.07
SREBF1-202ENST00000355815 PNPLA7Q6ZV29 1317 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 USP17L15C9J2P7 530 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 USP17L13C9JLJ4 530 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 USP17L11C9JVI0 530 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 USP17L18D6R9N7 530 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 USP17L22D6RA61 530 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 USP17L17D6RBQ6 530 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 USP17L19D6RCP7 530 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 USP17L20D6RJB6 530 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 USP17L24Q0WX57 530 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 PABPC4Q13310 644 aaKnown RBP eCLIP15.46■□□□□ 0.076e-7■■□□□ 12.2
SREBF1-202ENST00000355815 GKAP1Q5VSY0 366 aaPredicted RBP15.46■□□□□ 0.07
SREBF1-202ENST00000355815 USP17L6PQ6QN14 398 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 APBB1IPQ7Z5R6 666 aaPredicted RBP15.46■□□□□ 0.07
SREBF1-202ENST00000355815 IL17RAQ96F46 866 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 IFT74Q96LB3 600 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 CD209Q9NNX6 404 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 CD2APQ9Y5K6 639 aa15.46■□□□□ 0.07
SREBF1-202ENST00000355815 SALL1Q9NSC2 1324 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms