RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 LPIN2Q92539 896 aa13.54□□□□□ -0.24
TRERF1-202ENST00000354325 FAM114A2Q9NRY5 505 aa13.54□□□□□ -0.24
TRERF1-202ENST00000354325 IBSPP21815 317 aaPredicted RBP13.54□□□□□ -0.24
TRERF1-202ENST00000354325 LACTBP83111 547 aaPredicted RBP13.54□□□□□ -0.24
TRERF1-202ENST00000354325 TCIRG1Q13488 830 aa13.54□□□□□ -0.24
TRERF1-202ENST00000354325 ANKRD20A8PQ5CZ79 823 aa13.54□□□□□ -0.24
TRERF1-202ENST00000354325 TTLL7Q6ZT98 887 aa13.54□□□□□ -0.24
TRERF1-202ENST00000354325 GBP7Q8N8V2 638 aaPredicted RBP13.54□□□□□ -0.24
TRERF1-202ENST00000354325 CDK5RAP3Q96JB5 506 aa13.54□□□□□ -0.24
TRERF1-202ENST00000354325 TNKSO95271 1327 aa13.54□□□□□ -0.24
TRERF1-202ENST00000354325 CES2O00748 559 aa13.54□□□□□ -0.24
TRERF1-202ENST00000354325 RRAGAQ7L523 313 aa13.54□□□□□ -0.24
TRERF1-202ENST00000354325 ANKRD27Q96NW4 1050 aa13.54□□□□□ -0.24
TRERF1-202ENST00000354325 ZKSCAN3Q9BRR0 538 aa13.54□□□□□ -0.24
TRERF1-202ENST00000354325 ISCUQ9H1K1 167 aa13.54□□□□□ -0.24
TRERF1-202ENST00000354325 SEC31BQ9NQW1 1179 aa13.54□□□□□ -0.24
TRERF1-202ENST00000354325 RBM12Q9NTZ6 932 aaKnown RBP13.54□□□□□ -0.24
TRERF1-202ENST00000354325 LRP2BPQ9P2M1 347 aa13.54□□□□□ -0.24
TRERF1-202ENST00000354325 ARHGAP23Q9P227 1491 aa13.54□□□□□ -0.24
TRERF1-202ENST00000354325 KRT71Q3SY84 523 aa13.54□□□□□ -0.24
TRERF1-202ENST00000354325 SFMBT2Q5VUG0 894 aa13.54□□□□□ -0.24
TRERF1-202ENST00000354325 AGPAT5Q9NUQ2 364 aa13.54□□□□□ -0.24
TRERF1-202ENST00000354325 C4AP0C0L4 1744 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 C4BP0C0L5 1744 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 A0A087X0B3 334 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 MINDY4BA8MYZ0 360 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 SCP2P22307 547 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 NT5C2P49902 561 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 TRIM28Q13263 835 aaKnown RBP13.53□□□□□ -0.24
TRERF1-202ENST00000354325 ITGB3BPQ13352 177 aaPredicted RBP13.53□□□□□ -0.24
TRERF1-202ENST00000354325 XRCC4Q13426 336 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 E2F5Q15329 346 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 SAAL1Q96ER3 474 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 PSMB7Q99436 277 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 CARD10Q9BWT7 1032 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 MLXIPQ9HAP2 919 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 SENP2Q9HC62 589 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 INCENPQ9NQS7 918 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 PNPLA7Q6ZV29 1317 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 RNF225M0QZC1 329 aaPredicted RBP13.53□□□□□ -0.24
TRERF1-202ENST00000354325 ATP2C2O75185 946 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 SCTRP47872 440 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 PPARAQ07869 468 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 BICDL1Q6ZP65 573 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 APLFQ8IW19 511 aaPredicted RBP13.53□□□□□ -0.24
TRERF1-202ENST00000354325 CUL5Q93034 780 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 RAB34Q9BZG1 259 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 HOMER3Q9NSC5 361 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 UTP11Q9Y3A2 253 aaKnown RBP13.53□□□□□ -0.24
TRERF1-202ENST00000354325 UBR1Q8IWV7 1749 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 TRAPPC3O43617 180 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 SCG2P13521 617 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 CARSP49589 748 aaKnown RBP13.53□□□□□ -0.24
TRERF1-202ENST00000354325 SEC24CP53992 1094 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 LMNB2Q03252 620 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 SCARF1Q14162 830 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 HIBCHQ6NVY1 386 aaPredicted RBP13.53□□□□□ -0.24
TRERF1-202ENST00000354325 CHMP6Q96FZ7 201 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 CALR3Q96L12 384 aaKnown RBP13.53□□□□□ -0.24
TRERF1-202ENST00000354325 ZSCAN10Q96SZ4 725 aaPredicted RBP13.53□□□□□ -0.24
TRERF1-202ENST00000354325 NAP1L3Q99457 506 aaPredicted RBP13.53□□□□□ -0.24
TRERF1-202ENST00000354325 CCSER1Q9C0I3 900 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 RAB17Q9H0T7 212 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 ARMT1Q9H993 441 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 HAUS2Q9NVX0 235 aa13.53□□□□□ -0.24
TRERF1-202ENST00000354325 ZNF233A6NK53 670 aa13.52□□□□□ -0.24
TRERF1-202ENST00000354325 SERPING1P05155 500 aa13.52□□□□□ -0.24
TRERF1-202ENST00000354325 MAP2K1Q02750 393 aaPredicted RBP13.52□□□□□ -0.24
TRERF1-202ENST00000354325 SPATA5Q8NB90 893 aa13.52□□□□□ -0.24
TRERF1-202ENST00000354325 TCP11Q8WWU5 503 aa13.52□□□□□ -0.24
TRERF1-202ENST00000354325 SPAG5Q96R06 1193 aa13.52□□□□□ -0.24
TRERF1-202ENST00000354325 PIH1D3Q9NQM4 214 aaKnown RBP13.52□□□□□ -0.24
TRERF1-202ENST00000354325 LTN1O94822 1766 aa13.52□□□□□ -0.24
TRERF1-202ENST00000354325 MROH5Q6ZUA9 1318 aa13.52□□□□□ -0.24
TRERF1-202ENST00000354325 DISP2A7MBM2 1401 aa13.52□□□□□ -0.24
TRERF1-202ENST00000354325 COBLO75128 1261 aa13.52□□□□□ -0.25
TRERF1-202ENST00000354325 FLOT1O75955 427 aa13.52□□□□□ -0.25
TRERF1-202ENST00000354325 ARID4AP29374 1257 aaPredicted RBP13.52□□□□□ -0.25
TRERF1-202ENST00000354325 CXCR5P32302 372 aa13.52□□□□□ -0.25
TRERF1-202ENST00000354325 GBP1P32455 592 aa13.52□□□□□ -0.25
TRERF1-202ENST00000354325 ICA1Q05084 483 aa13.52□□□□□ -0.25
TRERF1-202ENST00000354325 ZRSR2Q15696 482 aaKnown RBP13.52□□□□□ -0.25
TRERF1-202ENST00000354325 TTI2Q6NXR4 508 aa13.52□□□□□ -0.25
TRERF1-202ENST00000354325 ZBTB38Q8NAP3 1195 aaPredicted RBP13.52□□□□□ -0.25
TRERF1-202ENST00000354325 HDAC7Q8WUI4 952 aa13.52□□□□□ -0.25
TRERF1-202ENST00000354325 SYN2Q92777 582 aaPredicted RBP13.52□□□□□ -0.25
TRERF1-202ENST00000354325 NDST4Q9H3R1 872 aa13.52□□□□□ -0.25
TRERF1-202ENST00000354325 TRIM49BA6NDI0 452 aa13.52□□□□□ -0.25
TRERF1-202ENST00000354325 CCDC169A6NNP5 214 aa13.52□□□□□ -0.25
TRERF1-202ENST00000354325 LCA5LO95447 670 aa13.52□□□□□ -0.25
TRERF1-202ENST00000354325 ATP11AP98196 1134 aa13.52□□□□□ -0.25
TRERF1-202ENST00000354325 EZH2Q15910 746 aaKnown RBP13.52□□□□□ -0.25
TRERF1-202ENST00000354325 C6orf89Q6UWU4 347 aa13.52□□□□□ -0.25
TRERF1-202ENST00000354325 SH3GLB2Q9NR46 395 aa13.52□□□□□ -0.25
TRERF1-202ENST00000354325 DDX20Q9UHI6 824 aaKnown RBP13.52□□□□□ -0.25
TRERF1-202ENST00000354325 RASAL2Q9UJF2 1139 aa13.52□□□□□ -0.25
TRERF1-202ENST00000354325 CAPN6Q9Y6Q1 641 aa13.52□□□□□ -0.25
TRERF1-202ENST00000354325 AFDNP55196 1824 aaKnown RBP13.52□□□□□ -0.25
TRERF1-202ENST00000354325 RASSF7Q02833 373 aa13.51□□□□□ -0.25
TRERF1-202ENST00000354325 ITIH4Q14624 930 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms