RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 GNA11P29992 359 aa19.94■□□□□ 0.78
CTSB-202ENST00000353047 IRAK1P51617 712 aa19.94■□□□□ 0.78
CTSB-202ENST00000353047 ICE2Q659A1 982 aa19.94■□□□□ 0.78
CTSB-202ENST00000353047 LOC102724159A0A0B4J2E5 919 aa19.94■□□□□ 0.78
CTSB-202ENST00000353047 KCNQ2O43526 872 aa19.94■□□□□ 0.78
CTSB-202ENST00000353047 GNAQP50148 359 aa19.94■□□□□ 0.78
CTSB-202ENST00000353047 PWP2Q15269 919 aaKnown RBP19.94■□□□□ 0.78
CTSB-202ENST00000353047 CCDC121Q6ZUS5 278 aa19.94■□□□□ 0.78
CTSB-202ENST00000353047 NEK8Q86SG6 692 aa19.94■□□□□ 0.78
CTSB-202ENST00000353047 MSANTD4Q8NCY6 345 aa19.94■□□□□ 0.78
CTSB-202ENST00000353047 SH3RF3Q8TEJ3 882 aaPredicted RBP19.94■□□□□ 0.78
CTSB-202ENST00000353047 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.94■□□□□ 0.78
CTSB-202ENST00000353047 ACTN3Q08043 901 aaPredicted RBP19.94■□□□□ 0.78
CTSB-202ENST00000353047 KRT71Q3SY84 523 aa19.94■□□□□ 0.78
CTSB-202ENST00000353047 MUM1L1Q5H9M0 696 aa19.94■□□□□ 0.78
CTSB-202ENST00000353047 C3orf67Q6ZVT6 689 aa19.94■□□□□ 0.78
CTSB-202ENST00000353047 DAAM2Q86T65 1068 aa19.94■□□□□ 0.78
CTSB-202ENST00000353047 MGARPQ8TDB4 240 aa19.94■□□□□ 0.78
CTSB-202ENST00000353047 SHISA4Q96DD7 197 aa19.94■□□□□ 0.78
CTSB-202ENST00000353047 SLC4A9Q96Q91 983 aa19.94■□□□□ 0.78
CTSB-202ENST00000353047 AKAP12Q02952 1782 aa19.94■□□□□ 0.78
CTSB-202ENST00000353047 TDP2O95551 362 aa19.93■□□□□ 0.78
CTSB-202ENST00000353047 CTNNA1P35221 906 aaKnown RBP19.93■□□□□ 0.78
CTSB-202ENST00000353047 TRIM28Q13263 835 aaKnown RBP19.93■□□□□ 0.78
CTSB-202ENST00000353047 SEC23AQ15436 765 aa19.93■□□□□ 0.78
CTSB-202ENST00000353047 GLIS3Q8NEA6 775 aa19.93■□□□□ 0.78
CTSB-202ENST00000353047 FAM84BQ96KN1 310 aaPredicted RBP19.93■□□□□ 0.78
CTSB-202ENST00000353047 MYO1FO00160 1098 aa19.93■□□□□ 0.78
CTSB-202ENST00000353047 EPHB6O15197 1021 aa19.93■□□□□ 0.78
CTSB-202ENST00000353047 DDAH1O94760 285 aa19.93■□□□□ 0.78
CTSB-202ENST00000353047 SSR1P43307 286 aaKnown RBP19.93■□□□□ 0.78
CTSB-202ENST00000353047 TSGA10Q9BZW7 698 aa19.93■□□□□ 0.78
CTSB-202ENST00000353047 CAPN11Q9UMQ6 739 aa19.93■□□□□ 0.78
CTSB-202ENST00000353047 GNPATO15228 680 aa19.93■□□□□ 0.78
CTSB-202ENST00000353047 IFNAR2P48551 515 aa19.93■□□□□ 0.78
CTSB-202ENST00000353047 TUBB4BP68371 445 aa19.93■□□□□ 0.78
CTSB-202ENST00000353047 TRAPPC11Q7Z392 1133 aa19.93■□□□□ 0.78
CTSB-202ENST00000353047 STIM2Q9P246 746 aa19.93■□□□□ 0.78
CTSB-202ENST00000353047 CNTNAP5Q8WYK1 1306 aa19.92■□□□□ 0.78
CTSB-202ENST00000353047 SFI1A8K8P3 1242 aa19.92■□□□□ 0.78
CTSB-202ENST00000353047 USH1GQ495M9 461 aa19.92■□□□□ 0.78
CTSB-202ENST00000353047 PDXDC2PQ6P474 469 aa19.92■□□□□ 0.78
CTSB-202ENST00000353047 NPHP3-ACAD11A0A0J9YXS1 232 aa19.92■□□□□ 0.78
CTSB-202ENST00000353047 CABS1Q96KC9 395 aa19.92■□□□□ 0.78
CTSB-202ENST00000353047 MINPP1Q9UNW1 487 aa19.92■□□□□ 0.78
CTSB-202ENST00000353047 KIAA1024Q9UPX6 916 aa19.92■□□□□ 0.78
CTSB-202ENST00000353047 RPS6KA1Q15418 735 aa19.92■□□□□ 0.78
CTSB-202ENST00000353047 ARHGAP44Q17R89 818 aa19.92■□□□□ 0.78
CTSB-202ENST00000353047 SLC51AQ86UW1 340 aa19.92■□□□□ 0.78
CTSB-202ENST00000353047 PNMA8AQ86V59 439 aaPredicted RBP19.92■□□□□ 0.78
CTSB-202ENST00000353047 TXNRD3Q86VQ6 643 aa19.92■□□□□ 0.78
CTSB-202ENST00000353047 CTNNBL1Q8WYA6 563 aaPredicted RBP19.92■□□□□ 0.78
CTSB-202ENST00000353047 CLIC2O15247 247 aa19.91■□□□□ 0.78
CTSB-202ENST00000353047 TCP10Q12799 353 aa19.91■□□□□ 0.78
CTSB-202ENST00000353047 PPP2R5BQ15173 497 aa19.91■□□□□ 0.78
CTSB-202ENST00000353047 IL6STP40189 918 aaPredicted RBP19.91■□□□□ 0.78
CTSB-202ENST00000353047 SLCO1A2P46721 670 aa19.91■□□□□ 0.78
CTSB-202ENST00000353047 TRADDQ15628 312 aa19.91■□□□□ 0.78
CTSB-202ENST00000353047 NT5DC1Q5TFE4 455 aa19.91■□□□□ 0.78
CTSB-202ENST00000353047 WDR59Q6PJI9 974 aa19.91■□□□□ 0.78
CTSB-202ENST00000353047 FBXL16Q8N461 479 aa19.91■□□□□ 0.78
CTSB-202ENST00000353047 VGLL2Q8N8G2 317 aa19.91■□□□□ 0.78
CTSB-202ENST00000353047 LARP4BQ92615 738 aaKnown RBP19.91■□□□□ 0.78
CTSB-202ENST00000353047 TRIM9Q9C026 710 aa19.91■□□□□ 0.78
CTSB-202ENST00000353047 DDX47Q9H0S4 455 aaKnown RBP19.91■□□□□ 0.78
CTSB-202ENST00000353047 TCP1P17987 556 aaKnown RBP19.91■□□□□ 0.78
CTSB-202ENST00000353047 MRRFQ96E11 262 aaKnown RBP19.91■□□□□ 0.78
CTSB-202ENST00000353047 C1orf167Q5SNV9 1468 aa19.9■□□□□ 0.78
CTSB-202ENST00000353047 SYF2O95926 243 aaKnown RBP19.9■□□□□ 0.78
CTSB-202ENST00000353047 RPSAP08865 295 aaKnown RBP19.9■□□□□ 0.78
CTSB-202ENST00000353047 PAK2Q13177 524 aa19.9■□□□□ 0.78
CTSB-202ENST00000353047 ASIC2Q16515 512 aa19.9■□□□□ 0.78
CTSB-202ENST00000353047 VWA3BQ502W6 1294 aa19.9■□□□□ 0.78
CTSB-202ENST00000353047 U2AF1L4Q8WU68 220 aaKnown RBP19.9■□□□□ 0.78
CTSB-202ENST00000353047 TBC1D31Q96DN5 1066 aa19.9■□□□□ 0.78
CTSB-202ENST00000353047 TMEM47Q9BQJ4 181 aa19.9■□□□□ 0.78
CTSB-202ENST00000353047 SNX12Q9UMY4 172 aa19.9■□□□□ 0.78
CTSB-202ENST00000353047 EIF4E1BA6NMX2 242 aaKnown RBP19.9■□□□□ 0.78
CTSB-202ENST00000353047 GBP6Q6ZN66 633 aa19.9■□□□□ 0.78
CTSB-202ENST00000353047 KCTD1Q719H9 257 aa19.9■□□□□ 0.78
CTSB-202ENST00000353047 APTXQ7Z2E3 356 aaKnown RBP19.9■□□□□ 0.78
CTSB-202ENST00000353047 HNRNPLLQ8WVV9 542 aaKnown RBP19.9■□□□□ 0.78
CTSB-202ENST00000353047 FAM53CQ9NYF3 392 aa19.9■□□□□ 0.78
CTSB-202ENST00000353047 FAM196BA6NMK8 535 aa19.9■□□□□ 0.78
CTSB-202ENST00000353047 CCDC84Q86UT8 332 aaPredicted RBP19.9■□□□□ 0.78
CTSB-202ENST00000353047 MYOCDQ8IZQ8 938 aa19.9■□□□□ 0.78
CTSB-202ENST00000353047 DDX12PQ92771 950 aa19.9■□□□□ 0.78
CTSB-202ENST00000353047 PAIP2Q9BPZ3 127 aaKnown RBP19.9■□□□□ 0.78
CTSB-202ENST00000353047 RAB21Q9UL25 225 aa19.9■□□□□ 0.78
CTSB-202ENST00000353047 PCDHA6Q9UN73 950 aa19.9■□□□□ 0.78
CTSB-202ENST00000353047 PCDHA8Q9Y5H6 950 aa19.9■□□□□ 0.78
CTSB-202ENST00000353047 ACTN1P12814 892 aa19.89■□□□□ 0.78
CTSB-202ENST00000353047 PABPC4Q13310 644 aaKnown RBP eCLIP19.89■□□□□ 0.782e-8■■■■■ 75.9
CTSB-202ENST00000353047 SEMA3EO15041 775 aa19.89■□□□□ 0.77
CTSB-202ENST00000353047 COPB2P35606 906 aa19.89■□□□□ 0.77
CTSB-202ENST00000353047 GJC1P36383 396 aa19.89■□□□□ 0.77
CTSB-202ENST00000353047 TNNC1P63316 161 aa19.89■□□□□ 0.77
CTSB-202ENST00000353047 IRF2BP1Q8IU81 584 aa19.89■□□□□ 0.77
CTSB-202ENST00000353047 TSEN2Q8NCE0 465 aaKnown RBP19.89■□□□□ 0.77
CTSB-202ENST00000353047 THAP9Q9H5L6 903 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms