RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 EPB41L4AQ9HCS5 686 aaPredicted RBP9.53□□□□□ -0.88
CD44-205ENST00000352818 PRKAG3Q9UGI9 489 aa9.53□□□□□ -0.88
CD44-205ENST00000352818 NRBP1Q9UHY1 535 aa9.53□□□□□ -0.88
CD44-205ENST00000352818 ZFYVE26Q68DK2 2539 aa9.52□□□□□ -0.88
CD44-205ENST00000352818 USP17L15C9J2P7 530 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 USP17L13C9JLJ4 530 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 USP17L11C9JVI0 530 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 USP17L18D6R9N7 530 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 USP17L22D6RA61 530 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 USP17L17D6RBQ6 530 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 USP17L19D6RCP7 530 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 USP17L20D6RJB6 530 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 RBAK-RBAKDNI3L0D1 243 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 CTAGE5O15320 804 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 PRC1O43663 620 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 ERCC3P19447 782 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 PDIA3P30101 505 aaKnown RBP9.52□□□□□ -0.89
CD44-205ENST00000352818 BTDP43251 543 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 ANTXR2P58335 489 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 KRT85P78386 507 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 USP17L24Q0WX57 530 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 RESTQ13127 1097 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 STK3Q13188 491 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 MAPK8IP2Q13387 824 aaPredicted RBP9.52□□□□□ -0.89
CD44-205ENST00000352818 COL19A1Q14993 1142 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 PUS10Q3MIT2 529 aaKnown RBP9.52□□□□□ -0.89
CD44-205ENST00000352818 CAVIN1Q6NZI2 390 aaKnown RBP9.52□□□□□ -0.89
CD44-205ENST00000352818 TBC1D10CQ8IV04 446 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 HERC6Q8IVU3 1022 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 SLC43A3Q8NBI5 491 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 FAM163AQ96GL9 167 aaPredicted RBP9.52□□□□□ -0.89
CD44-205ENST00000352818 SCLYQ96I15 445 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 TMEM87BQ96K49 555 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 NACAP1Q9BZK3 213 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 ZSCAN16Q9H4T2 348 aaPredicted RBP9.52□□□□□ -0.89
CD44-205ENST00000352818 CNPY2Q9Y2B0 182 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 GRIN2DO15399 1336 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 FAM208BQ5VWN6 2430 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 ATAD5Q96QE3 1844 aa9.52□□□□□ -0.89
CD44-205ENST00000352818 A0A0U1RQG5 324 aaPredicted RBP9.51□□□□□ -0.89
CD44-205ENST00000352818 PTPDC1A2A3K4 754 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 GSG1L2A8MUP6 293 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 SH2B2O14492 632 aaPredicted RBP9.51□□□□□ -0.89
CD44-205ENST00000352818 STRNO43815 780 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 DHX16O60231 1041 aaKnown RBP9.51□□□□□ -0.89
CD44-205ENST00000352818 JAK2O60674 1132 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 GDF11O95390 407 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 CTDNEP1O95476 244 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 ASGR1P07306 291 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 ASNSP08243 561 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 XRCC6P12956 609 aaKnown RBP eCLIP9.51□□□□□ -0.89
CD44-205ENST00000352818 CST5P28325 142 aaPredicted RBP9.51□□□□□ -0.89
CD44-205ENST00000352818 AVPR2P30518 371 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 DSG3P32926 999 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 HAND2P61296 217 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 PKN1Q16512 942 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 ATL3Q6DD88 541 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 GIMAP6Q6P9H5 292 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 USP17L2Q6R6M4 530 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 DGLUCYQ7Z3D6 616 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 GAS2L3Q86XJ1 694 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 IFNL3Q8IZI9 196 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 ADSSL1Q8N142 457 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 FAM184AQ8NB25 1140 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 STAG1Q8WVM7 1258 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 LRRC2Q9BYS8 371 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 KRT23Q9C075 422 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 NAPBQ9H115 298 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 TMEM63CQ9P1W3 806 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 LRP2BPQ9P2M1 347 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 ANAPC4Q9UJX5 808 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 ZBTB21Q9ULJ3 1066 aa9.51□□□□□ -0.89
CD44-205ENST00000352818 FLNBO75369 2602 aaKnown RBP9.51□□□□□ -0.89
CD44-205ENST00000352818 SIPA1L1O43166 1804 aa9.5□□□□□ -0.89
CD44-205ENST00000352818 GPR75-ASB3A0A0A6YYF3 556 aa9.5□□□□□ -0.89
CD44-205ENST00000352818 LETM1O95202 739 aaPredicted RBP9.5□□□□□ -0.89
CD44-205ENST00000352818 PCP11498 1178 aaKnown RBP9.5□□□□□ -0.89
CD44-205ENST00000352818 AKR1A1P14550 325 aa9.5□□□□□ -0.89
CD44-205ENST00000352818 VCAM1P19320 739 aa9.5□□□□□ -0.89
CD44-205ENST00000352818 CYP7A1P22680 504 aa9.5□□□□□ -0.89
CD44-205ENST00000352818 LIFRP42702 1097 aa9.5□□□□□ -0.89
CD44-205ENST00000352818 NT5C2P49902 561 aa9.5□□□□□ -0.89
CD44-205ENST00000352818 RCAN1P53805 252 aa9.5□□□□□ -0.89
CD44-205ENST00000352818 DNM1Q05193 864 aaKnown RBP9.5□□□□□ -0.89
CD44-205ENST00000352818 ZYXQ15942 572 aaKnown RBP9.5□□□□□ -0.89
CD44-205ENST00000352818 LRSAM1Q6UWE0 723 aa9.5□□□□□ -0.89
CD44-205ENST00000352818 PPP4R3CPQ6ZMV5 832 aa9.5□□□□□ -0.89
CD44-205ENST00000352818 TMCO2Q7Z6W1 182 aaPredicted RBP9.5□□□□□ -0.89
CD44-205ENST00000352818 SGMS1Q86VZ5 419 aa9.5□□□□□ -0.89
CD44-205ENST00000352818 METTL16Q86W50 562 aaKnown RBP9.5□□□□□ -0.89
CD44-205ENST00000352818 SUGP1Q8IWZ8 645 aaKnown RBP9.5□□□□□ -0.89
CD44-205ENST00000352818 LCORLQ8N3X6 602 aa9.5□□□□□ -0.89
CD44-205ENST00000352818 ASIC4Q96FT7 647 aa9.5□□□□□ -0.89
CD44-205ENST00000352818 CHAMP1Q96JM3 812 aa9.5□□□□□ -0.89
CD44-205ENST00000352818 GLT1D1Q96MS3 346 aa9.5□□□□□ -0.89
CD44-205ENST00000352818 RIOK1Q9BRS2 568 aaKnown RBP9.5□□□□□ -0.89
CD44-205ENST00000352818 TINF2Q9BSI4 451 aa9.5□□□□□ -0.89
CD44-205ENST00000352818 SCAND2PQ9GZW5 306 aaPredicted RBP9.5□□□□□ -0.89
CD44-205ENST00000352818 SPATC1LQ9H0A9 340 aa9.5□□□□□ -0.89
CD44-205ENST00000352818 TRPV6Q9H1D0 765 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms