RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 MYH7P12883 1935 aa14.58□□□□□ -0.07
IFT88-202ENST00000351808 GPR75-ASB3A0A0A6YYF3 556 aa14.58□□□□□ -0.08
IFT88-202ENST00000351808 RAD51CO43502 376 aa14.58□□□□□ -0.08
IFT88-202ENST00000351808 IGKV5-2P06315 115 aa14.58□□□□□ -0.08
IFT88-202ENST00000351808 IFI16Q16666 785 aaKnown RBP14.58□□□□□ -0.08
IFT88-202ENST00000351808 APOA5Q6Q788 366 aa14.58□□□□□ -0.08
IFT88-202ENST00000351808 UBLCP1Q8WVY7 318 aaPredicted RBP14.58□□□□□ -0.08
IFT88-202ENST00000351808 PCMTD1Q96MG8 357 aaPredicted RBP14.58□□□□□ -0.08
IFT88-202ENST00000351808 PLEKHG4BQ96PX9 1271 aa14.58□□□□□ -0.08
IFT88-202ENST00000351808 LRRC4CQ9HCJ2 640 aa14.58□□□□□ -0.08
IFT88-202ENST00000351808 ASB3Q9Y575 518 aa14.58□□□□□ -0.08
IFT88-202ENST00000351808 PCDHGA4Q9Y5G9 962 aa14.58□□□□□ -0.08
IFT88-202ENST00000351808 BUB1O43683 1085 aa14.58□□□□□ -0.08
IFT88-202ENST00000351808 RARAP10276 462 aa14.58□□□□□ -0.08
IFT88-202ENST00000351808 CNGA1P29973 690 aa14.58□□□□□ -0.08
IFT88-202ENST00000351808 ALDH3A1P30838 453 aa14.58□□□□□ -0.08
IFT88-202ENST00000351808 WASHC4Q2M389 1173 aa14.58□□□□□ -0.08
IFT88-202ENST00000351808 AGBL2Q5U5Z8 902 aa14.58□□□□□ -0.08
IFT88-202ENST00000351808 CADPS2Q86UW7 1296 aa14.58□□□□□ -0.08
IFT88-202ENST00000351808 DDX42Q86XP3 938 aaKnown RBP eCLIP14.58□□□□□ -0.08
IFT88-202ENST00000351808 KLHL7Q8IXQ5 586 aa14.58□□□□□ -0.08
IFT88-202ENST00000351808 EEF2KMTQ96G04 330 aa14.58□□□□□ -0.08
IFT88-202ENST00000351808 ZNF317Q96PQ6 595 aaPredicted RBP14.58□□□□□ -0.08
IFT88-202ENST00000351808 UBE2OQ9C0C9 1292 aaKnown RBP14.58□□□□□ -0.08
IFT88-202ENST00000351808 ECT2Q9H8V3 914 aa14.58□□□□□ -0.08
IFT88-202ENST00000351808 TMEM165Q9HC07 324 aa14.58□□□□□ -0.08
IFT88-202ENST00000351808 ANKIB1Q9P2G1 1089 aa14.58□□□□□ -0.08
IFT88-202ENST00000351808 GDAQ9Y2T3 454 aa14.58□□□□□ -0.08
IFT88-202ENST00000351808 FLT4P35916 1363 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 ACEP12821 1306 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 PRAMEF22A3QJZ6 481 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 NPTXRO95502 500 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 MMP1P03956 469 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 SETSIPP0DME0 302 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 PCK1P35558 622 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 TIMM10P62072 90 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 CCDC57Q2TAC2 916 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 RRP12Q5JTH9 1297 aaKnown RBP14.57□□□□□ -0.08
IFT88-202ENST00000351808 TYW1BQ6NUM6 668 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 PIGWQ7Z7B1 504 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 ATL2Q8NHH9 583 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 FAM129AQ9BZQ8 928 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 CABP5Q9NP86 173 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 ZNF232Q9UNY5 417 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 TBC1D2BQ9UPU7 963 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 MYO5AQ9Y4I1 1855 aaKnown RBP14.57□□□□□ -0.08
IFT88-202ENST00000351808 C4AP0C0L4 1744 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 C4BP0C0L5 1744 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 CPDO75976 1380 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 TPP2P29144 1249 aaPredicted RBP14.57□□□□□ -0.08
IFT88-202ENST00000351808 CEBPAP49715 358 aaPredicted RBP14.57□□□□□ -0.08
IFT88-202ENST00000351808 ZBED6P86452 979 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 ITIH4Q14624 930 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 KRT71Q3SY84 523 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 RNF220Q5VTB9 566 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 CYB5R4Q7L1T6 521 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 PROSER2Q86WR7 435 aaPredicted RBP14.57□□□□□ -0.08
IFT88-202ENST00000351808 LRRC34Q8IZ02 419 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 PROCA1Q8NCQ7 364 aaPredicted RBP14.57□□□□□ -0.08
IFT88-202ENST00000351808 KLHL29Q96CT2 875 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 UBAC1Q9BSL1 405 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 TTYH3Q9C0H2 523 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 ESF1Q9H501 851 aaKnown RBP14.57□□□□□ -0.08
IFT88-202ENST00000351808 MRC1P22897 1456 aa14.57□□□□□ -0.08
IFT88-202ENST00000351808 AFF2P51816 1311 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 RFX5P48382 616 aaPredicted RBP14.56□□□□□ -0.08
IFT88-202ENST00000351808 CCNG1P51959 295 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 KLHDC7AQ5VTJ3 777 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 ANKRD23Q86SG2 305 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 RBM12BQ8IXT5 1001 aaKnown RBP14.56□□□□□ -0.08
IFT88-202ENST00000351808 CCDC82Q8N4S0 544 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 FAM217BQ9NTX9 383 aaPredicted RBP14.56□□□□□ -0.08
IFT88-202ENST00000351808 AATFQ9NY61 560 aaKnown RBP eCLIP14.56□□□□□ -0.08
IFT88-202ENST00000351808 FBXL5Q9UKA1 691 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 BLOC1S6Q9UL45 172 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 MED1Q15648 1581 aaPredicted RBP14.56□□□□□ -0.08
IFT88-202ENST00000351808 XDHP47989 1333 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 GOLGA8AA7E2F4 631 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 ZNF213O14771 459 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 PRCPP42785 496 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 ERVK-9P63128 1117 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 SSRP1Q08945 709 aaKnown RBP14.56□□□□□ -0.08
IFT88-202ENST00000351808 OXER1Q8TDS5 423 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 MTFR1LQ9H019 292 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 SUDS3Q9H7L9 328 aaPredicted RBP14.56□□□□□ -0.08
IFT88-202ENST00000351808 H7C1D1 291 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 ZBTB43O43298 467 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 ECHS1P30084 290 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 FLT3P36888 993 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 MSH2P43246 934 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 CTDSPL2Q05D32 466 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 MYLK4Q86YV6 388 aaPredicted RBP14.56□□□□□ -0.08
IFT88-202ENST00000351808 LRRC45Q96CN5 670 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 MTMR8Q96EF0 704 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 RPS6KC1Q96S38 1066 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 PSMD1Q99460 953 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 SAMD15Q9P1V8 674 aa14.56□□□□□ -0.08
IFT88-202ENST00000351808 BIN2Q9UBW5 565 aaPredicted RBP14.56□□□□□ -0.08
IFT88-202ENST00000351808 ZMYND8Q9ULU4 1186 aaPredicted RBP14.56□□□□□ -0.08
IFT88-202ENST00000351808 BCL9LQ86UU0 1499 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms