RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 POMGNT1Q8WZA1 660 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 MCUR1Q96AQ8 359 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 ARAP3Q8WWN8 1544 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 GLI2P10070 1586 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 PLCG1P19174 1290 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 KSR1Q8IVT5 923 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 TAB3Q8N5C8 712 aaPredicted RBP17.53■□□□□ 0.4
PTPN11-201ENST00000351677 ZNF577Q9BSK1 485 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 SERPINB13Q9UIV8 391 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 PPFIA4O75335 1185 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 CRCPO75575 148 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 ANKRD35Q8N283 1001 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 CSADQ9Y600 493 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 CHD1O14646 1710 aa17.52■□□□□ 0.4
PTPN11-201ENST00000351677 P4HA1P13674 534 aa17.52■□□□□ 0.4
PTPN11-201ENST00000351677 YARSP54577 528 aaKnown RBP17.52■□□□□ 0.4
PTPN11-201ENST00000351677 YWHAEP62258 255 aaKnown RBP17.52■□□□□ 0.4
PTPN11-201ENST00000351677 CAPS2Q9BXY5 557 aa17.52■□□□□ 0.4
PTPN11-201ENST00000351677 NEDD4P46934 1319 aa17.52■□□□□ 0.4
PTPN11-201ENST00000351677 CXCR5P32302 372 aa17.52■□□□□ 0.4
PTPN11-201ENST00000351677 POLGP54098 1239 aaPredicted RBP17.52■□□□□ 0.4
PTPN11-201ENST00000351677 MAN2A1Q16706 1144 aa17.52■□□□□ 0.4
PTPN11-201ENST00000351677 ZBTB8OSQ8IWT0 167 aa17.52■□□□□ 0.4
PTPN11-201ENST00000351677 NLGN1Q8N2Q7 840 aa17.52■□□□□ 0.4
PTPN11-201ENST00000351677 LGSNQ5TDP6 509 aa17.52■□□□□ 0.39
PTPN11-201ENST00000351677 KAZNQ674X7 775 aa17.52■□□□□ 0.39
PTPN11-201ENST00000351677 KCTD16Q68DU8 428 aa17.52■□□□□ 0.39
PTPN11-201ENST00000351677 PALM2Q8IXS6 379 aa17.52■□□□□ 0.39
PTPN11-201ENST00000351677 CYP2E1P05181 493 aaPredicted RBP17.51■□□□□ 0.39
PTPN11-201ENST00000351677 MESDQ14696 234 aa17.51■□□□□ 0.39
PTPN11-201ENST00000351677 CCDC62Q6P9F0 684 aa17.51■□□□□ 0.39
PTPN11-201ENST00000351677 CYB5R4Q7L1T6 521 aa17.51■□□□□ 0.39
PTPN11-201ENST00000351677 MMS19Q96T76 1030 aa17.51■□□□□ 0.39
PTPN11-201ENST00000351677 PHLPP2Q6ZVD8 1323 aa17.51■□□□□ 0.39
PTPN11-201ENST00000351677 I3L4J1 428 aa17.51■□□□□ 0.39
PTPN11-201ENST00000351677 PCK1P35558 622 aa17.51■□□□□ 0.39
PTPN11-201ENST00000351677 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.51■□□□□ 0.39
PTPN11-201ENST00000351677 TRIM37O94972 964 aa17.51■□□□□ 0.39
PTPN11-201ENST00000351677 FLAD1Q8NFF5 587 aa17.51■□□□□ 0.39
PTPN11-201ENST00000351677 STAM2O75886 525 aa17.51■□□□□ 0.39
PTPN11-201ENST00000351677 KMT5BQ4FZB7 885 aa17.51■□□□□ 0.39
PTPN11-201ENST00000351677 CNKSR1Q969H4 720 aa17.51■□□□□ 0.39
PTPN11-201ENST00000351677 AFPP02771 609 aaKnown RBP17.51■□□□□ 0.39
PTPN11-201ENST00000351677 KRT81Q14533 505 aa17.51■□□□□ 0.39
PTPN11-201ENST00000351677 GADL1Q6ZQY3 521 aa17.51■□□□□ 0.39
PTPN11-201ENST00000351677 CCDC13Q8IYE1 715 aa17.51■□□□□ 0.39
PTPN11-201ENST00000351677 CCT6BQ92526 530 aa17.51■□□□□ 0.39
PTPN11-201ENST00000351677 PTPN22Q9Y2R2 807 aa17.51■□□□□ 0.39
PTPN11-201ENST00000351677 PPP2R5CQ13362 524 aa17.5■□□□□ 0.39
PTPN11-201ENST00000351677 SPTLC3Q9NUV7 552 aa17.5■□□□□ 0.39
PTPN11-201ENST00000351677 CDC42BPGQ6DT37 1551 aa17.5■□□□□ 0.39
PTPN11-201ENST00000351677 TNNC2P02585 160 aa17.5■□□□□ 0.39
PTPN11-201ENST00000351677 TPD52P55327 224 aaPredicted RBP17.5■□□□□ 0.39
PTPN11-201ENST00000351677 C2orf54Q08AI8 447 aa17.5■□□□□ 0.39
PTPN11-201ENST00000351677 FAM133AQ8N9E0 248 aa17.5■□□□□ 0.39
PTPN11-201ENST00000351677 FAM71BQ8TC56 605 aa17.5■□□□□ 0.39
PTPN11-201ENST00000351677 BCAS4Q8TDM0 211 aa17.5■□□□□ 0.39
PTPN11-201ENST00000351677 MOCS3O95396 460 aa17.5■□□□□ 0.39
PTPN11-201ENST00000351677 PIK3CAP42336 1068 aa17.5■□□□□ 0.39
PTPN11-201ENST00000351677 NCAPG2Q86XI2 1143 aa17.5■□□□□ 0.39
PTPN11-201ENST00000351677 GRK7Q8WTQ7 553 aa17.5■□□□□ 0.39
PTPN11-201ENST00000351677 GOLPH3LQ9H4A5 285 aa17.5■□□□□ 0.39
PTPN11-201ENST00000351677 LRRN2O75325 713 aa17.5■□□□□ 0.39
PTPN11-201ENST00000351677 FKBP3Q00688 224 aaKnown RBP17.5■□□□□ 0.39
PTPN11-201ENST00000351677 CCDC117Q8IWD4 279 aaPredicted RBP17.5■□□□□ 0.39
PTPN11-201ENST00000351677 FAM186BQ8IYM0 893 aa17.5■□□□□ 0.39
PTPN11-201ENST00000351677 PCIF1Q9H4Z3 704 aa17.5■□□□□ 0.39
PTPN11-201ENST00000351677 SETD1BQ9UPS6 1966 aaKnown RBP17.5■□□□□ 0.39
PTPN11-201ENST00000351677 CYP2D6P10635 497 aa17.5■□□□□ 0.39
PTPN11-201ENST00000351677 PSMC2P35998 433 aaKnown RBP17.5■□□□□ 0.39
PTPN11-201ENST00000351677 PPP2R5EQ16537 467 aa17.5■□□□□ 0.39
PTPN11-201ENST00000351677 SDCCAG8Q86SQ7 713 aaPredicted RBP17.5■□□□□ 0.39
PTPN11-201ENST00000351677 BSDC1Q9NW68 430 aaPredicted RBP17.5■□□□□ 0.39
PTPN11-201ENST00000351677 EAPPQ56P03 285 aaPredicted RBP17.49■□□□□ 0.39
PTPN11-201ENST00000351677 RESP18Q5W5W9 173 aa17.49■□□□□ 0.39
PTPN11-201ENST00000351677 RIC8AQ9NPQ8 531 aa17.49■□□□□ 0.39
PTPN11-201ENST00000351677 THAP12O43422 761 aa17.49■□□□□ 0.39
PTPN11-201ENST00000351677 GBP1P32455 592 aa17.49■□□□□ 0.39
PTPN11-201ENST00000351677 DCAF15Q66K64 600 aa17.49■□□□□ 0.39
PTPN11-201ENST00000351677 RETREG2Q8NC44 543 aa17.49■□□□□ 0.39
PTPN11-201ENST00000351677 MED4Q9NPJ6 270 aa17.49■□□□□ 0.39
PTPN11-201ENST00000351677 STK17AQ9UEE5 414 aa17.49■□□□□ 0.39
PTPN11-201ENST00000351677 SEPT9Q9UHD8 586 aaPredicted RBP17.49■□□□□ 0.39
PTPN11-201ENST00000351677 STK38LQ9Y2H1 464 aa17.49■□□□□ 0.39
PTPN11-201ENST00000351677 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.49■□□□□ 0.39
PTPN11-201ENST00000351677 HNRNPDLO14979 420 aaKnown RBP17.49■□□□□ 0.39
PTPN11-201ENST00000351677 BBOX1O75936 387 aa17.49■□□□□ 0.39
PTPN11-201ENST00000351677 MAN1A1P33908 653 aa17.49■□□□□ 0.39
PTPN11-201ENST00000351677 CDK8P49336 464 aa17.49■□□□□ 0.39
PTPN11-201ENST00000351677 KANSL2Q9H9L4 492 aa17.49■□□□□ 0.39
PTPN11-201ENST00000351677 NHEJ1Q9H9Q4 299 aaPredicted RBP17.49■□□□□ 0.39
PTPN11-201ENST00000351677 CASP1P29466 404 aa17.49■□□□□ 0.39
PTPN11-201ENST00000351677 BZW2Q9Y6E2 419 aaKnown RBP17.49■□□□□ 0.39
PTPN11-201ENST00000351677 RNF40O75150 1001 aa17.49■□□□□ 0.39
PTPN11-201ENST00000351677 SNAP25P60880 206 aa17.49■□□□□ 0.39
PTPN11-201ENST00000351677 TBC1D31Q96DN5 1066 aa17.49■□□□□ 0.39
PTPN11-201ENST00000351677 BAIAP2L1Q9UHR4 511 aa17.49■□□□□ 0.39
PTPN11-201ENST00000351677 ERCC6L2Q5T890 1561 aa17.48■□□□□ 0.39
PTPN11-201ENST00000351677 FTCDO95954 541 aa17.48■□□□□ 0.39
PTPN11-201ENST00000351677 GCFC2P16383 781 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 253.2 ms