RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 SH2B1Q9NRF2 756 aaPredicted RBP13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 SLC5A4Q9NY91 659 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 ZBTB21Q9ULJ3 1066 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 POLA2Q14181 598 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 SOGA3Q5TF21 947 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 PIAS4Q8N2W9 510 aaPredicted RBP13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 PAF1Q8N7H5 531 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 LZICQ8WZA0 190 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 IFT74Q96LB3 600 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 SYNCQ9H7C4 482 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 ARHGEF38Q9NXL2 777 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 KIF24Q5T7B8 1368 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 HARSP12081 509 aaKnown RBP13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 MDH1P40925 334 aaKnown RBP13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 MTF1Q14872 753 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 RAPGEF4Q8WZA2 1011 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 MRPL44Q9H9J2 332 aaKnown RBP13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 ARIH1Q9Y4X5 557 aaPredicted RBP13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 NRKQ7Z2Y5 1582 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 TMEM247A6NEH6 219 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 SERPINB3P29508 390 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 XRCC4Q13426 336 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 ADAM9Q13443 819 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 APLFQ8IW19 511 aaPredicted RBP13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 ERMNQ8TAM6 284 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 KIFC2Q96AC6 838 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 AIDAQ96BJ3 306 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 USP28Q96RU2 1077 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 ZBTB3Q9H5J0 574 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 POTEFA5A3E0 1075 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 A6NHS1 94 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 SPECC1L-ADORA2AF8WAN1 911 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 NPTXRO95502 500 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 VAV2P52735 878 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 PABPC4Q13310 644 aaKnown RBP eCLIP13.4□□□□□ -0.266e-10■■□□□ 11.9
CTNNB1-201ENST00000349496 ZMYM1Q5SVZ6 1142 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 CCSAPQ6IQ19 270 aaPredicted RBP13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 FAM47EQ6ZV65 393 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 ZC3H18Q86VM9 953 aaKnown RBP13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 CCDC43Q96MW1 224 aaKnown RBP13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 NEUROD6Q96NK8 337 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 CCT7Q99832 543 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 SENP2Q9HC62 589 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 STAP2Q9UGK3 403 aa13.4□□□□□ -0.26
CTNNB1-201ENST00000349496 ITIH6Q6UXX5 1313 aa13.4□□□□□ -0.27
CTNNB1-201ENST00000349496 SOWAHDA6NJG2 315 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 GRM8O00222 908 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 OXCT1P55809 520 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 STK38Q15208 465 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 KSR2Q6VAB6 950 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 ZNF554Q86TJ5 538 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 PGBD1Q96JS3 809 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 DDX23Q9BUQ8 820 aaKnown RBP13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 SH3BP5O60239 455 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 PYGMP11217 842 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 TBL3Q12788 808 aaKnown RBP13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 SEPT2Q15019 361 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 WDR93Q6P2C0 686 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 LARP1Q6PKG0 1096 aaKnown RBP13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 SLX1AQ9BQ83 275 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 STRN4Q9NRL3 753 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 NWD1Q149M9 1564 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 SFI1A8K8P3 1242 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 TMEM232C9JQI7 657 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 TIMM44O43615 452 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 KCNA3P22001 575 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 MCL1Q07820 350 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 NSUN2Q08J23 767 aaKnown RBP eCLIP13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 ZBTB17Q13105 803 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 HLTFQ14527 1009 aaKnown RBP eCLIP13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 PDIA6Q15084 440 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 KIF2BQ8N4N8 673 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 DYDC2Q96IM9 177 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 SNRKQ9NRH2 765 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 SPO11Q9Y5K1 396 aa13.39□□□□□ -0.27
CTNNB1-201ENST00000349496 ETS2P15036 469 aa13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 TFCP2Q12800 502 aa13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 RCN2Q14257 317 aa13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 IFI16Q16666 785 aaKnown RBP13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 CCDC110Q8TBZ0 833 aa13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 FAM163AQ96GL9 167 aaPredicted RBP13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 SYT15Q9BQS2 421 aa13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 PLVAPQ9BX97 442 aa13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 EIF2AQ9BY44 585 aaKnown RBP13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 ECHDC1Q9NTX5 307 aa13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 MKS1Q9NXB0 559 aa13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 ITGB1BP2Q9UKP3 347 aa13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 RBM8AQ9Y5S9 174 aaKnown RBP13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 TIMM10P62072 90 aa13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 ST3GAL1Q11201 340 aa13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 PAK2Q13177 524 aa13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 ZNF790Q6PG37 636 aa13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 PDCD7Q8N8D1 485 aaKnown RBP13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 NLRP3Q96P20 1036 aa13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 GGT7Q9UJ14 662 aa13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 TRIM37O94972 964 aa13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 POTEIP0CG38 1075 aa13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 RRP36Q96EU6 259 aaKnown RBP13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 CTAGE1Q96RT6 745 aa13.38□□□□□ -0.27
CTNNB1-201ENST00000349496 SH3GL2Q99962 352 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms