RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 TBC1D9BQ66K14 1250 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 PIK3AP1Q6ZUJ8 805 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 OSBPL9Q96SU4 736 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 MLXIPQ9HAP2 919 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 BSDC1Q9NW68 430 aaPredicted RBP20.68■□□□□ 0.9
SCARF1-202ENST00000348987 FAM153AQ9UHL3 310 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 B4DLN1 442 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 VAV2P52735 878 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 SATB1Q01826 763 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 IQCKQ8N0W5 287 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 TRIM58Q8NG06 486 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 RUBCNQ92622 972 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 NSUN4Q96CB9 384 aaKnown RBP20.68■□□□□ 0.9
SCARF1-202ENST00000348987 NRAPQ86VF7 1730 aa20.68■□□□□ 0.9
SCARF1-202ENST00000348987 DUOX1Q9NRD9 1551 aa20.67■□□□□ 0.9
SCARF1-202ENST00000348987 E7EVH7 732 aa20.67■□□□□ 0.9
SCARF1-202ENST00000348987 MOCS3O95396 460 aa20.67■□□□□ 0.9
SCARF1-202ENST00000348987 ITIH3Q06033 890 aa20.67■□□□□ 0.9
SCARF1-202ENST00000348987 PPP2R5AQ15172 486 aa20.67■□□□□ 0.9
SCARF1-202ENST00000348987 PPP2R5BQ15173 497 aa20.67■□□□□ 0.9
SCARF1-202ENST00000348987 CCDC181Q5TID7 509 aa20.67■□□□□ 0.9
SCARF1-202ENST00000348987 PDXDC2PQ6P474 469 aa20.67■□□□□ 0.9
SCARF1-202ENST00000348987 NGLY1Q96IV0 654 aa20.67■□□□□ 0.9
SCARF1-202ENST00000348987 DDX20Q9UHI6 824 aaKnown RBP20.67■□□□□ 0.9
SCARF1-202ENST00000348987 RPN1P04843 607 aaKnown RBP20.67■□□□□ 0.9
SCARF1-202ENST00000348987 FGRP09769 529 aa20.67■□□□□ 0.9
SCARF1-202ENST00000348987 MCM7P33993 719 aa20.67■□□□□ 0.9
SCARF1-202ENST00000348987 C8orf74Q6P047 294 aa20.67■□□□□ 0.9
SCARF1-202ENST00000348987 ZNF572Q7Z3I7 529 aaPredicted RBP20.67■□□□□ 0.9
SCARF1-202ENST00000348987 CCDC170Q8IYT3 715 aa20.67■□□□□ 0.9
SCARF1-202ENST00000348987 DCP1AQ9NPI6 582 aaPredicted RBP20.67■□□□□ 0.9
SCARF1-202ENST00000348987 NFU1Q9UMS0 254 aa20.67■□□□□ 0.9
SCARF1-202ENST00000348987 ESYT3A0FGR9 886 aa20.66■□□□□ 0.9
SCARF1-202ENST00000348987 RASSF10A6NK89 507 aa20.66■□□□□ 0.9
SCARF1-202ENST00000348987 GTPBP6O43824 516 aaPredicted RBP20.66■□□□□ 0.9
SCARF1-202ENST00000348987 TACC1O75410 805 aa20.66■□□□□ 0.9
SCARF1-202ENST00000348987 PLEKP08567 350 aaPredicted RBP20.66■□□□□ 0.9
SCARF1-202ENST00000348987 CARSP49589 748 aaKnown RBP20.66■□□□□ 0.9
SCARF1-202ENST00000348987 CCDC114Q96M63 670 aa20.66■□□□□ 0.9
SCARF1-202ENST00000348987 LTBP4Q8N2S1 1624 aa20.66■□□□□ 0.9
SCARF1-202ENST00000348987 ZSCAN5CA6NGD5 496 aaPredicted RBP20.66■□□□□ 0.9
SCARF1-202ENST00000348987 PAX7P23759 505 aa20.66■□□□□ 0.9
SCARF1-202ENST00000348987 MDH1P40925 334 aaKnown RBP20.66■□□□□ 0.9
SCARF1-202ENST00000348987 PLCB4Q15147 1175 aa20.66■□□□□ 0.9
SCARF1-202ENST00000348987 IFT81Q8WYA0 676 aa20.66■□□□□ 0.9
SCARF1-202ENST00000348987 TTYH3Q9C0H2 523 aa20.66■□□□□ 0.9
SCARF1-202ENST00000348987 PPANQ9NQ55 473 aaKnown RBP20.66■□□□□ 0.9
SCARF1-202ENST00000348987 RBM12Q9NTZ6 932 aaKnown RBP20.66■□□□□ 0.9
SCARF1-202ENST00000348987 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.66■□□□□ 0.9
SCARF1-202ENST00000348987 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.66■□□□□ 0.9
SCARF1-202ENST00000348987 PDS5AQ29RF7 1337 aaKnown RBP20.65■□□□□ 0.9
SCARF1-202ENST00000348987 FAM107AO95990 144 aa20.65■□□□□ 0.9
SCARF1-202ENST00000348987 GCFC2P16383 781 aaKnown RBP20.65■□□□□ 0.9
SCARF1-202ENST00000348987 FAM228AQ86W67 206 aa20.65■□□□□ 0.9
SCARF1-202ENST00000348987 NCK2O43639 380 aa20.65■□□□□ 0.9
SCARF1-202ENST00000348987 GLI1P08151 1106 aa20.65■□□□□ 0.9
SCARF1-202ENST00000348987 ATP2C1P98194 919 aaPredicted RBP20.65■□□□□ 0.9
SCARF1-202ENST00000348987 SF3B3Q15393 1217 aaKnown RBP20.65■□□□□ 0.9
SCARF1-202ENST00000348987 SPA17Q15506 151 aa20.65■□□□□ 0.9
SCARF1-202ENST00000348987 C6orf89Q6UWU4 347 aa20.65■□□□□ 0.9
SCARF1-202ENST00000348987 TXNRD3Q86VQ6 643 aa20.65■□□□□ 0.9
SCARF1-202ENST00000348987 FAXDC2Q96IV6 333 aa20.65■□□□□ 0.9
SCARF1-202ENST00000348987 PCMTD1Q96MG8 357 aaPredicted RBP20.65■□□□□ 0.9
SCARF1-202ENST00000348987 RBM28Q9NW13 759 aaKnown RBP20.65■□□□□ 0.9
SCARF1-202ENST00000348987 GUCY2FP51841 1108 aa20.64■□□□□ 0.9
SCARF1-202ENST00000348987 SNCBQ16143 134 aa20.64■□□□□ 0.9
SCARF1-202ENST00000348987 SPRED3Q2MJR0 410 aa20.64■□□□□ 0.9
SCARF1-202ENST00000348987 PARP9Q8IXQ6 854 aa20.64■□□□□ 0.9
SCARF1-202ENST00000348987 PIK3R5Q8WYR1 880 aa20.64■□□□□ 0.9
SCARF1-202ENST00000348987 CCDC42Q96M95 316 aa20.64■□□□□ 0.9
SCARF1-202ENST00000348987 DNM2P50570 870 aa20.64■□□□□ 0.89
SCARF1-202ENST00000348987 NLRP5P59047 1200 aa20.64■□□□□ 0.89
SCARF1-202ENST00000348987 CYB5D1Q6P9G0 228 aa20.64■□□□□ 0.89
SCARF1-202ENST00000348987 RASGRP4Q8TDF6 673 aa20.64■□□□□ 0.89
SCARF1-202ENST00000348987 SCLT1Q96NL6 688 aa20.64■□□□□ 0.89
SCARF1-202ENST00000348987 TSGA10Q9BZW7 698 aa20.64■□□□□ 0.89
SCARF1-202ENST00000348987 ZNF652Q9Y2D9 606 aa20.64■□□□□ 0.89
SCARF1-202ENST00000348987 FRMD3A2A2Y4 597 aa20.63■□□□□ 0.89
SCARF1-202ENST00000348987 NEBLO76041 1014 aa20.63■□□□□ 0.89
SCARF1-202ENST00000348987 SRGNP10124 158 aa20.63■□□□□ 0.89
SCARF1-202ENST00000348987 PRLRP16471 622 aa20.63■□□□□ 0.89
SCARF1-202ENST00000348987 EEF1GP26641 437 aaKnown RBP20.63■□□□□ 0.89
SCARF1-202ENST00000348987 HPDP32754 393 aaPredicted RBP20.63■□□□□ 0.89
SCARF1-202ENST00000348987 E2F5Q15329 346 aa20.63■□□□□ 0.89
SCARF1-202ENST00000348987 RCSD1Q6JBY9 416 aa20.63■□□□□ 0.89
SCARF1-202ENST00000348987 CCDC121Q6ZUS5 278 aa20.63■□□□□ 0.89
SCARF1-202ENST00000348987 FBXO33Q7Z6M2 555 aa20.63■□□□□ 0.89
SCARF1-202ENST00000348987 FUKQ8N0W3 1084 aa20.63■□□□□ 0.89
SCARF1-202ENST00000348987 MS4A14Q96JA4 679 aa20.63■□□□□ 0.89
SCARF1-202ENST00000348987 TRIM47Q96LD4 638 aa20.63■□□□□ 0.89
SCARF1-202ENST00000348987 RMND1Q9NWS8 449 aa20.63■□□□□ 0.89
SCARF1-202ENST00000348987 HYOU1Q9Y4L1 999 aa20.63■□□□□ 0.89
SCARF1-202ENST00000348987 SCG2P13521 617 aa20.63■□□□□ 0.89
SCARF1-202ENST00000348987 TNFRSF8P28908 595 aa20.63■□□□□ 0.89
SCARF1-202ENST00000348987 ZBED6P86452 979 aa20.63■□□□□ 0.89
SCARF1-202ENST00000348987 GPIHBP1Q8IV16 184 aa20.63■□□□□ 0.89
SCARF1-202ENST00000348987 KIRREL3Q8IZU9 778 aa20.63■□□□□ 0.89
SCARF1-202ENST00000348987 ADSSL1Q8N142 457 aa20.63■□□□□ 0.89
SCARF1-202ENST00000348987 GPKOWQ92917 476 aaPredicted RBP eCLIP20.63■□□□□ 0.89
SCARF1-202ENST00000348987 IFIH1Q9BYX4 1025 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms