RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 UPF1Q92900 1129 aaKnown RBP eCLIP22.83■■□□□ 1.25
CHRNA3-202ENST00000348639 PANX2Q96RD6 677 aa22.83■■□□□ 1.25
CHRNA3-202ENST00000348639 MYH7BA7E2Y1 1941 aa22.83■■□□□ 1.24
CHRNA3-202ENST00000348639 A0A1W2PRG0 241 aa22.82■■□□□ 1.24
CHRNA3-202ENST00000348639 TRIM49BA6NDI0 452 aa22.82■■□□□ 1.24
CHRNA3-202ENST00000348639 MEIS2O14770 477 aa22.82■■□□□ 1.24
CHRNA3-202ENST00000348639 N4BP3O15049 544 aa22.82■■□□□ 1.24
CHRNA3-202ENST00000348639 CTIFO43310 598 aaKnown RBP22.82■■□□□ 1.24
CHRNA3-202ENST00000348639 CCT6AP40227 531 aaKnown RBP22.82■■□□□ 1.24
CHRNA3-202ENST00000348639 PMS1P54277 932 aaKnown RBP22.82■■□□□ 1.24
CHRNA3-202ENST00000348639 TGFB2P61812 414 aa22.82■■□□□ 1.24
CHRNA3-202ENST00000348639 SPICE1Q8N0Z3 855 aa22.82■■□□□ 1.24
CHRNA3-202ENST00000348639 SNX29Q8TEQ0 813 aa22.82■■□□□ 1.24
CHRNA3-202ENST00000348639 THAP9Q9H5L6 903 aa22.82■■□□□ 1.24
CHRNA3-202ENST00000348639 CXCL9Q07325 125 aa22.82■■□□□ 1.24
CHRNA3-202ENST00000348639 TMEM119Q4V9L6 283 aa22.82■■□□□ 1.24
CHRNA3-202ENST00000348639 COBLL1Q53SF7 1204 aa22.82■■□□□ 1.24
CHRNA3-202ENST00000348639 DALRD3Q5D0E6 543 aaKnown RBP22.82■■□□□ 1.24
CHRNA3-202ENST00000348639 FBXO11Q86XK2 927 aa22.82■■□□□ 1.24
CHRNA3-202ENST00000348639 IRF2BP1Q8IU81 584 aa22.82■■□□□ 1.24
CHRNA3-202ENST00000348639 LARP4BQ92615 738 aaKnown RBP22.82■■□□□ 1.24
CHRNA3-202ENST00000348639 ANO3Q9BYT9 981 aa22.82■■□□□ 1.24
CHRNA3-202ENST00000348639 CYP3A7-CYP3A51PA0A087WV96 503 aa22.81■■□□□ 1.24
CHRNA3-202ENST00000348639 CYP3A7P24462 503 aa22.81■■□□□ 1.24
CHRNA3-202ENST00000348639 RBL2Q08999 1139 aa22.81■■□□□ 1.24
CHRNA3-202ENST00000348639 FKBP1CQ5VVH2 108 aa22.81■■□□□ 1.24
CHRNA3-202ENST00000348639 TTI2Q6NXR4 508 aa22.81■■□□□ 1.24
CHRNA3-202ENST00000348639 AGBL3Q8NEM8 1001 aa22.81■■□□□ 1.24
CHRNA3-202ENST00000348639 TMEM39BQ9GZU3 492 aa22.81■■□□□ 1.24
CHRNA3-202ENST00000348639 PCDHA12Q9UN75 941 aa22.81■■□□□ 1.24
CHRNA3-202ENST00000348639 CNTNAP1P78357 1384 aa22.81■■□□□ 1.24
CHRNA3-202ENST00000348639 ZSCAN12O43309 604 aa22.81■■□□□ 1.24
CHRNA3-202ENST00000348639 MARCH6O60337 910 aa22.81■■□□□ 1.24
CHRNA3-202ENST00000348639 POLD1P28340 1107 aa22.81■■□□□ 1.24
CHRNA3-202ENST00000348639 MCM6Q14566 821 aa22.81■■□□□ 1.24
CHRNA3-202ENST00000348639 CNNM4Q6P4Q7 775 aa22.81■■□□□ 1.24
CHRNA3-202ENST00000348639 MOXD1Q6UVY6 613 aa22.81■■□□□ 1.24
CHRNA3-202ENST00000348639 MTMR14Q8NCE2 650 aa22.81■■□□□ 1.24
CHRNA3-202ENST00000348639 NOC3LQ8WTT2 800 aaKnown RBP22.81■■□□□ 1.24
CHRNA3-202ENST00000348639 RAD54LQ92698 747 aa22.81■■□□□ 1.24
CHRNA3-202ENST00000348639 MBOAT7Q96N66 472 aa22.81■■□□□ 1.24
CHRNA3-202ENST00000348639 VPS16Q9H269 839 aa22.81■■□□□ 1.24
CHRNA3-202ENST00000348639 ARHGEF10LQ9HCE6 1279 aa22.81■■□□□ 1.24
CHRNA3-202ENST00000348639 TAB2Q9NYJ8 693 aa22.81■■□□□ 1.24
CHRNA3-202ENST00000348639 KIF13BQ9NQT8 1826 aa22.8■■□□□ 1.24
CHRNA3-202ENST00000348639 PVALEFA0A1B0GWK0 134 aa22.8■■□□□ 1.24
CHRNA3-202ENST00000348639 EEF1GP26641 437 aaKnown RBP22.8■■□□□ 1.24
CHRNA3-202ENST00000348639 ECE1P42892 770 aa22.8■■□□□ 1.24
CHRNA3-202ENST00000348639 RBM10P98175 930 aaKnown RBP22.8■■□□□ 1.24
CHRNA3-202ENST00000348639 STK4Q13043 487 aa22.8■■□□□ 1.24
CHRNA3-202ENST00000348639 CDAN1Q8IWY9 1227 aa22.8■■□□□ 1.24
CHRNA3-202ENST00000348639 REXO1L1PQ8IX06 675 aa22.8■■□□□ 1.24
CHRNA3-202ENST00000348639 TRIM47Q96LD4 638 aa22.8■■□□□ 1.24
CHRNA3-202ENST00000348639 NUDT12Q9BQG2 462 aa22.8■■□□□ 1.24
CHRNA3-202ENST00000348639 LRRC27Q9C0I9 530 aa22.8■■□□□ 1.24
CHRNA3-202ENST00000348639 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.8■■□□□ 1.24
CHRNA3-202ENST00000348639 BICDL2A1A5D9 508 aa22.79■■□□□ 1.24
CHRNA3-202ENST00000348639 MYMKA6NI61 221 aa22.79■■□□□ 1.24
CHRNA3-202ENST00000348639 CCNE1P24864 410 aa22.79■■□□□ 1.24
CHRNA3-202ENST00000348639 MMP14P50281 582 aa22.79■■□□□ 1.24
CHRNA3-202ENST00000348639 MIGA2Q7L4E1 593 aa22.79■■□□□ 1.24
CHRNA3-202ENST00000348639 CRYGNQ8WXF5 182 aa22.79■■□□□ 1.24
CHRNA3-202ENST00000348639 JDP2Q8WYK2 163 aa22.79■■□□□ 1.24
CHRNA3-202ENST00000348639 TSC1Q92574 1164 aa22.79■■□□□ 1.24
CHRNA3-202ENST00000348639 NAA15Q9BXJ9 866 aaKnown RBP22.79■■□□□ 1.24
CHRNA3-202ENST00000348639 TAOK3Q9H2K8 898 aa22.79■■□□□ 1.24
CHRNA3-202ENST00000348639 KCNMB3Q9NPA1 279 aa22.79■■□□□ 1.24
CHRNA3-202ENST00000348639 USH1GQ495M9 461 aa22.79■■□□□ 1.24
CHRNA3-202ENST00000348639 UNC13DQ70J99 1090 aa22.79■■□□□ 1.24
CHRNA3-202ENST00000348639 P2RX5Q93086 422 aa22.79■■□□□ 1.24
CHRNA3-202ENST00000348639 SRRTQ9BXP5 876 aaKnown RBP22.79■■□□□ 1.24
CHRNA3-202ENST00000348639 PPP2R2CQ9Y2T4 447 aa22.79■■□□□ 1.24
CHRNA3-202ENST00000348639 TMX2Q9Y320 296 aa22.79■■□□□ 1.24
CHRNA3-202ENST00000348639 MFAP3LO75121 409 aa22.78■■□□□ 1.24
CHRNA3-202ENST00000348639 FCER1AP12319 257 aa22.78■■□□□ 1.24
CHRNA3-202ENST00000348639 HYIQ5T013 277 aa22.78■■□□□ 1.24
CHRNA3-202ENST00000348639 CNGA4Q8IV77 575 aa22.78■■□□□ 1.24
CHRNA3-202ENST00000348639 DUSP9Q99956 384 aaKnown RBP22.78■■□□□ 1.24
CHRNA3-202ENST00000348639 TBC1D12O60347 775 aa22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 FOSP01100 380 aaPredicted RBP22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 GYPCP04921 128 aa22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 NBPF9Q3BBW0 867 aa22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 CIAPIN1Q6FI81 312 aa22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 CREBRFQ8IUR6 639 aa22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 CCDC51Q96ER9 411 aa22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 ZBTB21Q9ULJ3 1066 aa22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 SLC26A4O43511 780 aa22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 TPM1P09493 284 aa22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 HOXA7P31268 230 aaPredicted RBP22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 ETF1P62495 437 aaKnown RBP22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 ARHGAP4P98171 946 aa22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 TRIM14Q14142 442 aa22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 ILDR2Q71H61 639 aa22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 KCNK18Q7Z418 384 aa22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 FAM83AQ86UY5 434 aa22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 CSGALNACT2Q8N6G5 542 aa22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 KIAA0895Q8NCT3 520 aa22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 ACER1Q8TDN7 264 aa22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 CPLX3Q8WVH0 158 aa22.77■■□□□ 1.24
CHRNA3-202ENST00000348639 GJA10Q969M2 543 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms