RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 TTLL1O95922 423 aa11.96□□□□□ -0.5
CLCN6-202ENST00000346436 TNNI1P19237 187 aa11.96□□□□□ -0.5
CLCN6-202ENST00000346436 KCNA4P22459 653 aa11.96□□□□□ -0.5
CLCN6-202ENST00000346436 CUL4BQ13620 913 aa11.96□□□□□ -0.5
CLCN6-202ENST00000346436 Q3C1V9 767 aa11.96□□□□□ -0.5
CLCN6-202ENST00000346436 GPR161Q8N6U8 529 aaKnown RBP11.96□□□□□ -0.5
CLCN6-202ENST00000346436 ACRBPQ8NEB7 543 aa11.96□□□□□ -0.5
CLCN6-202ENST00000346436 ATRIPQ8WXE1 791 aa11.96□□□□□ -0.5
CLCN6-202ENST00000346436 SALL3Q9BXA9 1300 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 NBPF26B4DH59 902 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 FOXO4P98177 505 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 NBPF10Q6P3W6 841 aaKnown RBP11.95□□□□□ -0.5
CLCN6-202ENST00000346436 NLRP10Q86W26 655 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 TPH2Q8IWU9 490 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 NBPF15Q8N660 670 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 USP17L5A8MUK1 530 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 VGLL3A8MV65 326 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 MMP1P03956 469 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 BMP3P12645 472 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 ACTN1P12814 892 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 ANXA13P27216 316 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 RAPGEF1Q13905 1077 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 SEPT14Q6ZU15 432 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 IKBKBO14920 756 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 ECE2O60344 883 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 RASGRF1Q13972 1273 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 MUM1L1Q5H9M0 696 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 SLC35F6Q8N357 371 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 URGCPQ8TCY9 931 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 PIGBQ92521 554 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 SLC12A6Q9UHW9 1150 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 USP42Q9H9J4 1324 aaKnown RBP11.95□□□□□ -0.5
CLCN6-202ENST00000346436 SMIM23A6NLE4 172 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 GIPC1O14908 333 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 ZMYND10O75800 440 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 IVLP07476 585 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 TMEM191BP0C7N4 346 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 GYS2P54840 703 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 HUNKP57058 714 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 SPATA1Q5VX52 437 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 MAEAQ7L5Y9 396 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 ATG9AQ7Z3C6 839 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 VSTM4Q8IW00 320 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 NELFCDQ8IXH7 590 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 SLITRK6Q9H5Y7 841 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 VWDEQ8N2E2 1590 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 SOS2Q07890 1332 aaPredicted RBP11.95□□□□□ -0.5
CLCN6-202ENST00000346436 TMEM110-MUSTN1A8MSY1 372 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 ARMCX5Q6P1M9 558 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 USP17L2Q6R6M4 530 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 SARM1Q6SZW1 724 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 CEP128Q6ZU80 1094 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 TOGARAM2Q6ZUX3 1019 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 CABP7Q86V35 215 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 MTFR1LQ9H019 292 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 MTUS1Q9ULD2 1270 aa11.95□□□□□ -0.5
CLCN6-202ENST00000346436 PHLPP2Q6ZVD8 1323 aa11.94□□□□□ -0.5
CLCN6-202ENST00000346436 SMCO2A6NFE2 343 aa11.94□□□□□ -0.5
CLCN6-202ENST00000346436 GOLGA8CPA6NN73 597 aa11.94□□□□□ -0.5
CLCN6-202ENST00000346436 FDX1P10109 184 aa11.94□□□□□ -0.5
CLCN6-202ENST00000346436 STAT2P52630 851 aa11.94□□□□□ -0.5
CLCN6-202ENST00000346436 DMP1Q13316 513 aaPredicted RBP11.94□□□□□ -0.5
CLCN6-202ENST00000346436 RASA3Q14644 834 aa11.94□□□□□ -0.5
CLCN6-202ENST00000346436 PLCB4Q15147 1175 aa11.94□□□□□ -0.5
CLCN6-202ENST00000346436 TTLL11Q8NHH1 800 aa11.94□□□□□ -0.5
CLCN6-202ENST00000346436 TBC1D31Q96DN5 1066 aa11.94□□□□□ -0.5
CLCN6-202ENST00000346436 NLRC4Q9NPP4 1024 aa11.94□□□□□ -0.5
CLCN6-202ENST00000346436 ZNRF3Q9ULT6 936 aa11.94□□□□□ -0.5
CLCN6-202ENST00000346436 DEPDC5O75140 1603 aa11.94□□□□□ -0.5
CLCN6-202ENST00000346436 PRR29P0C7W0 189 aa11.94□□□□□ -0.5
CLCN6-202ENST00000346436 SESTD1Q86VW0 696 aa11.94□□□□□ -0.5
CLCN6-202ENST00000346436 OXER1Q8TDS5 423 aa11.94□□□□□ -0.5
CLCN6-202ENST00000346436 TECP42680 631 aa11.94□□□□□ -0.5
CLCN6-202ENST00000346436 LRRC47Q8N1G4 583 aaKnown RBP11.94□□□□□ -0.5
CLCN6-202ENST00000346436 PLCD4Q9BRC7 762 aa11.94□□□□□ -0.5
CLCN6-202ENST00000346436 PDE11AQ9HCR9 933 aa11.94□□□□□ -0.5
CLCN6-202ENST00000346436 LARSQ9P2J5 1176 aaKnown RBP11.94□□□□□ -0.5
CLCN6-202ENST00000346436 ZNF233A6NK53 670 aa11.94□□□□□ -0.5
CLCN6-202ENST00000346436 GPATCH11Q8N954 259 aa11.94□□□□□ -0.5
CLCN6-202ENST00000346436 DPF2Q92785 391 aa11.94□□□□□ -0.5
CLCN6-202ENST00000346436 SECISBP2LQ93073 1101 aaKnown RBP11.94□□□□□ -0.5
CLCN6-202ENST00000346436 REREQ9P2R6 1566 aa11.94□□□□□ -0.5
CLCN6-202ENST00000346436 F8W8V4 182 aa11.93□□□□□ -0.5
CLCN6-202ENST00000346436 MB21D2Q8IYB1 491 aaPredicted RBP11.93□□□□□ -0.5
CLCN6-202ENST00000346436 SF3A3Q12874 501 aaKnown RBP eCLIP11.93□□□□□ -0.53e-8■■■□□ 17.4
CLCN6-202ENST00000346436 TRIM14Q14142 442 aa11.93□□□□□ -0.5
CLCN6-202ENST00000346436 YAF2Q8IY57 180 aa11.93□□□□□ -0.5
CLCN6-202ENST00000346436 FAM76AQ8TAV0 307 aa11.93□□□□□ -0.5
CLCN6-202ENST00000346436 AFAP1L1Q8TED9 768 aa11.93□□□□□ -0.5
CLCN6-202ENST00000346436 GANCQ8TET4 914 aa11.93□□□□□ -0.5
CLCN6-202ENST00000346436 KAZALD1Q96I82 304 aa11.93□□□□□ -0.5
CLCN6-202ENST00000346436 TNFAIP3P21580 790 aa11.93□□□□□ -0.5
CLCN6-202ENST00000346436 YY1P25490 414 aa11.93□□□□□ -0.5
CLCN6-202ENST00000346436 IQCB1Q15051 598 aa11.93□□□□□ -0.5
CLCN6-202ENST00000346436 BLIDQ8IZY5 108 aa11.93□□□□□ -0.5
CLCN6-202ENST00000346436 ANKRD13CQ8N6S4 541 aa11.93□□□□□ -0.5
CLCN6-202ENST00000346436 MMS19Q96T76 1030 aa11.93□□□□□ -0.5
CLCN6-202ENST00000346436 ST7Q9NRC1 585 aa11.93□□□□□ -0.5
CLCN6-202ENST00000346436 ZHX2Q9Y6X8 837 aa11.93□□□□□ -0.5
CLCN6-202ENST00000346436 LRRIQ4A6NIV6 560 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms