RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 IFNAR2P48551 515 aa16.96■□□□□ 0.3
SRPK1-201ENST00000346162 PDCD2Q16342 344 aaPredicted RBP16.96■□□□□ 0.3
SRPK1-201ENST00000346162 RABL6Q3YEC7 729 aaPredicted RBP16.96■□□□□ 0.3
SRPK1-201ENST00000346162 GCNT3O95395 438 aa16.95■□□□□ 0.3
SRPK1-201ENST00000346162 E4F1Q66K89 784 aaPredicted RBP16.95■□□□□ 0.3
SRPK1-201ENST00000346162 ANKRD42Q8N9B4 389 aa16.95■□□□□ 0.3
SRPK1-201ENST00000346162 PSMD1Q99460 953 aa16.95■□□□□ 0.3
SRPK1-201ENST00000346162 MRPL44Q9H9J2 332 aaKnown RBP16.95■□□□□ 0.3
SRPK1-201ENST00000346162 LCMT1Q9UIC8 334 aa16.95■□□□□ 0.3
SRPK1-201ENST00000346162 MTUS1Q9ULD2 1270 aa16.95■□□□□ 0.3
SRPK1-201ENST00000346162 PCDHB6Q9Y5E3 794 aa16.95■□□□□ 0.3
SRPK1-201ENST00000346162 CCDC169A6NNP5 214 aa16.95■□□□□ 0.3
SRPK1-201ENST00000346162 SFMBT2Q5VUG0 894 aa16.95■□□□□ 0.3
SRPK1-201ENST00000346162 KIAA0825Q8IV33 1275 aa16.95■□□□□ 0.3
SRPK1-201ENST00000346162 NOL3O60936 208 aaKnown RBP16.95■□□□□ 0.3
SRPK1-201ENST00000346162 MAEAQ7L5Y9 396 aa16.95■□□□□ 0.3
SRPK1-201ENST00000346162 TBC1D10CQ8IV04 446 aa16.95■□□□□ 0.3
SRPK1-201ENST00000346162 GBP7Q8N8V2 638 aaPredicted RBP16.95■□□□□ 0.3
SRPK1-201ENST00000346162 KIAA1210Q9ULL0 1709 aa16.95■□□□□ 0.3
SRPK1-201ENST00000346162 USP42Q9H9J4 1324 aaKnown RBP16.95■□□□□ 0.3
SRPK1-201ENST00000346162 KDM3AQ9Y4C1 1321 aa16.95■□□□□ 0.3
SRPK1-201ENST00000346162 SUN1O94901 812 aa16.94■□□□□ 0.3
SRPK1-201ENST00000346162 SMTNP53814 917 aa16.94■□□□□ 0.3
SRPK1-201ENST00000346162 DOK7Q18PE1 504 aa16.94■□□□□ 0.3
SRPK1-201ENST00000346162 TSGA10IPQ3SY00 556 aa16.94■□□□□ 0.3
SRPK1-201ENST00000346162 DDIT3P35638 169 aa16.94■□□□□ 0.3
SRPK1-201ENST00000346162 FOXO4P98177 505 aa16.94■□□□□ 0.3
SRPK1-201ENST00000346162 CRYMQ14894 314 aa16.94■□□□□ 0.3
SRPK1-201ENST00000346162 DENND2CQ68D51 928 aa16.94■□□□□ 0.3
SRPK1-201ENST00000346162 FAM196AQ6ZSG2 479 aa16.94■□□□□ 0.3
SRPK1-201ENST00000346162 SMYD4Q8IYR2 804 aaPredicted RBP16.94■□□□□ 0.3
SRPK1-201ENST00000346162 SLC39A2Q9NP94 309 aa16.94■□□□□ 0.3
SRPK1-201ENST00000346162 ADGRB1O14514 1584 aa16.94■□□□□ 0.3
SRPK1-201ENST00000346162 B4DLN1 442 aa16.94■□□□□ 0.3
SRPK1-201ENST00000346162 COPB1P53618 953 aaKnown RBP16.94■□□□□ 0.3
SRPK1-201ENST00000346162 FYB2Q5VWT5 728 aa16.94■□□□□ 0.3
SRPK1-201ENST00000346162 GPBP1Q86WP2 473 aa16.94■□□□□ 0.3
SRPK1-201ENST00000346162 MAN1B1Q9UKM7 699 aa16.94■□□□□ 0.3
SRPK1-201ENST00000346162 PCDHA4Q9UN74 947 aa16.94■□□□□ 0.3
SRPK1-201ENST00000346162 SRPRBQ9Y5M8 271 aaKnown RBP16.94■□□□□ 0.3
SRPK1-201ENST00000346162 DDX39AO00148 427 aaKnown RBP16.94■□□□□ 0.3
SRPK1-201ENST00000346162 PRPF3O43395 683 aaKnown RBP16.94■□□□□ 0.3
SRPK1-201ENST00000346162 EXOC3O60645 756 aa16.94■□□□□ 0.3
SRPK1-201ENST00000346162 STX2P32856 288 aa16.94■□□□□ 0.3
SRPK1-201ENST00000346162 PLCB3Q01970 1234 aa16.94■□□□□ 0.3
SRPK1-201ENST00000346162 ACRBPQ8NEB7 543 aa16.94■□□□□ 0.3
SRPK1-201ENST00000346162 OSBPL9Q96SU4 736 aa16.94■□□□□ 0.3
SRPK1-201ENST00000346162 STK32BQ9NY57 414 aa16.94■□□□□ 0.3
SRPK1-201ENST00000346162 TBC1D8O95759 1140 aa16.93■□□□□ 0.3
SRPK1-201ENST00000346162 TMED1Q13445 227 aa16.93■□□□□ 0.3
SRPK1-201ENST00000346162 CCDC97Q96F63 343 aaPredicted RBP16.93■□□□□ 0.3
SRPK1-201ENST00000346162 TRIM28Q13263 835 aaKnown RBP16.93■□□□□ 0.3
SRPK1-201ENST00000346162 ZMAT2Q96NC0 199 aaKnown RBP16.93■□□□□ 0.3
SRPK1-201ENST00000346162 CD248Q9HCU0 757 aa16.93■□□□□ 0.3
SRPK1-201ENST00000346162 INTS9Q9NV88 658 aaKnown RBP16.93■□□□□ 0.3
SRPK1-201ENST00000346162 BSDC1Q9NW68 430 aaPredicted RBP16.93■□□□□ 0.3
SRPK1-201ENST00000346162 COBLO75128 1261 aa16.93■□□□□ 0.3
SRPK1-201ENST00000346162 FLOT1O75955 427 aa16.93■□□□□ 0.3
SRPK1-201ENST00000346162 VSNL1P62760 191 aa16.93■□□□□ 0.3
SRPK1-201ENST00000346162 CCZ1BP86790 482 aa16.93■□□□□ 0.3
SRPK1-201ENST00000346162 CCZ1P86791 482 aaPredicted RBP16.93■□□□□ 0.3
SRPK1-201ENST00000346162 BIRC3Q13489 604 aa16.93■□□□□ 0.3
SRPK1-201ENST00000346162 DLGAP5Q15398 846 aa16.93■□□□□ 0.3
SRPK1-201ENST00000346162 CCDC62Q6P9F0 684 aa16.93■□□□□ 0.3
SRPK1-201ENST00000346162 ENOX1Q8TC92 643 aaKnown RBP16.93■□□□□ 0.3
SRPK1-201ENST00000346162 KIDINS220Q9ULH0 1771 aa16.93■□□□□ 0.3
SRPK1-201ENST00000346162 MYO1FO00160 1098 aa16.93■□□□□ 0.3
SRPK1-201ENST00000346162 USP17L8P0C7I0 530 aa16.93■□□□□ 0.3
SRPK1-201ENST00000346162 PRR16Q569H4 304 aa16.93■□□□□ 0.3
SRPK1-201ENST00000346162 ZBTB10Q96DT7 871 aa16.93■□□□□ 0.3
SRPK1-201ENST00000346162 FNBP1Q96RU3 617 aa16.93■□□□□ 0.3
SRPK1-201ENST00000346162 PCDHB13Q9Y5F0 798 aa16.93■□□□□ 0.3
SRPK1-201ENST00000346162 DCAF8L1A6NGE4 600 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 SKIP12755 728 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 CDC25AP30304 524 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 RPS6KA1Q15418 735 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 CLEC4GQ6UXB4 293 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 GSTA5Q7RTV2 222 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 MB21D2Q8IYB1 491 aaPredicted RBP16.92■□□□□ 0.3
SRPK1-201ENST00000346162 ALDH8A1Q9H2A2 487 aaPredicted RBP16.92■□□□□ 0.3
SRPK1-201ENST00000346162 EPB41L5Q9HCM4 733 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 CD2APQ9Y5K6 639 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 CDHR2Q9BYE9 1310 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 SPOPO43791 374 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 GNA14O95837 355 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 MYCLP12524 364 aaPredicted RBP16.92■□□□□ 0.3
SRPK1-201ENST00000346162 DYNC1I2Q13409 638 aaKnown RBP16.92■□□□□ 0.3
SRPK1-201ENST00000346162 CERKLQ49MI3 558 aaPredicted RBP16.92■□□□□ 0.3
SRPK1-201ENST00000346162 FAM182BQ5T319 152 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 TPH2Q8IWU9 490 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 SUPT20HQ8NEM7 779 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 MECOMQ03112 1051 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 C2orf54Q08AI8 447 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 NYAP1Q6ZVC0 841 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 WDR24Q96S15 920 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 PALLDQ8WX93 1383 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 PPIP5K2O43314 1243 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 PDHA1P08559 390 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 FAM26FQ5R3K3 315 aa16.92■□□□□ 0.3
SRPK1-201ENST00000346162 NSMFQ6X4W1 530 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms