RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 KIF5AQ12840 1032 aa14.79□□□□□ -0.04
CASC4-202ENST00000345795 SMARCAL1Q9NZC9 954 aa14.79□□□□□ -0.04
CASC4-202ENST00000345795 ZBTB39O15060 712 aa14.79□□□□□ -0.04
CASC4-202ENST00000345795 BMP3P12645 472 aa14.79□□□□□ -0.04
CASC4-202ENST00000345795 FAM26FQ5R3K3 315 aa14.79□□□□□ -0.04
CASC4-202ENST00000345795 CNNM4Q6P4Q7 775 aa14.79□□□□□ -0.04
CASC4-202ENST00000345795 RAD9BQ6WBX8 426 aa14.79□□□□□ -0.04
CASC4-202ENST00000345795 RBM43Q6ZSC3 357 aaKnown RBP14.79□□□□□ -0.04
CASC4-202ENST00000345795 PROM2Q8N271 834 aa14.79□□□□□ -0.04
CASC4-202ENST00000345795 ZCCHC17Q9NP64 241 aaKnown RBP14.79□□□□□ -0.04
CASC4-202ENST00000345795 GAS7O60861 476 aa14.79□□□□□ -0.04
CASC4-202ENST00000345795 TCP11X2Q5H9J9 407 aa14.79□□□□□ -0.04
CASC4-202ENST00000345795 ZNF658Q5TYW1 1059 aaPredicted RBP14.79□□□□□ -0.04
CASC4-202ENST00000345795 SP8Q8IXZ3 490 aa14.79□□□□□ -0.04
CASC4-202ENST00000345795 ZNF710Q8N1W2 664 aa14.79□□□□□ -0.04
CASC4-202ENST00000345795 CCDC127Q96BQ5 260 aa14.79□□□□□ -0.04
CASC4-202ENST00000345795 ANO3Q9BYT9 981 aa14.79□□□□□ -0.04
CASC4-202ENST00000345795 CGNQ9P2M7 1197 aaKnown RBP14.79□□□□□ -0.04
CASC4-202ENST00000345795 TAF1P21675 1872 aa14.79□□□□□ -0.04
CASC4-202ENST00000345795 KIF2AO00139 706 aaPredicted RBP14.78□□□□□ -0.04
CASC4-202ENST00000345795 NDUFB10O96000 172 aa14.78□□□□□ -0.04
CASC4-202ENST00000345795 PNMA6AP0CW24 399 aaPredicted RBP14.78□□□□□ -0.04
CASC4-202ENST00000345795 GSPT2Q8IYD1 628 aaKnown RBP14.78□□□□□ -0.04
CASC4-202ENST00000345795 BICD1Q96G01 975 aa14.78□□□□□ -0.04
CASC4-202ENST00000345795 DNM3Q9UQ16 869 aa14.78□□□□□ -0.04
CASC4-202ENST00000345795 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.78□□□□□ -0.04
CASC4-202ENST00000345795 LRRC37A3O60309 1634 aa14.78□□□□□ -0.04
CASC4-202ENST00000345795 RHBDL3P58872 404 aa14.78□□□□□ -0.04
CASC4-202ENST00000345795 MKRN4PQ13434 485 aaPredicted RBP14.78□□□□□ -0.04
CASC4-202ENST00000345795 CC2D2BQ6DHV5 1058 aa14.78□□□□□ -0.04
CASC4-202ENST00000345795 C16orf86Q6ZW13 317 aa14.78□□□□□ -0.04
CASC4-202ENST00000345795 IFT81Q8WYA0 676 aa14.78□□□□□ -0.04
CASC4-202ENST00000345795 AMNQ9BXJ7 453 aa14.78□□□□□ -0.04
CASC4-202ENST00000345795 TRIM31Q9BZY9 425 aa14.78□□□□□ -0.04
CASC4-202ENST00000345795 IKZF4Q9H2S9 585 aa14.78□□□□□ -0.04
CASC4-202ENST00000345795 ARHGEF10LQ9HCE6 1279 aa14.78□□□□□ -0.04
CASC4-202ENST00000345795 RBAK-RBAKDNI3L0D1 243 aa14.78□□□□□ -0.04
CASC4-202ENST00000345795 LRRN2O75325 713 aa14.78□□□□□ -0.04
CASC4-202ENST00000345795 PLEKP08567 350 aaPredicted RBP14.78□□□□□ -0.04
CASC4-202ENST00000345795 HLTFQ14527 1009 aaKnown RBP eCLIP14.78□□□□□ -0.04
CASC4-202ENST00000345795 DPH6Q7L8W6 267 aa14.78□□□□□ -0.04
CASC4-202ENST00000345795 AKT1S1Q96B36 256 aa14.78□□□□□ -0.04
CASC4-202ENST00000345795 PPP1R16BQ96T49 567 aa14.78□□□□□ -0.04
CASC4-202ENST00000345795 PAGR1Q9BTK6 254 aa14.78□□□□□ -0.04
CASC4-202ENST00000345795 LSM14BQ9BX40 385 aaKnown RBP14.78□□□□□ -0.04
CASC4-202ENST00000345795 ANAPC4Q9UJX5 808 aa14.78□□□□□ -0.04
CASC4-202ENST00000345795 CCPG1Q9ULG6 757 aa14.78□□□□□ -0.04
CASC4-202ENST00000345795 CTAGE15A4D2H0 777 aa14.77□□□□□ -0.04
CASC4-202ENST00000345795 CTAGE8P0CG41 777 aa14.77□□□□□ -0.04
CASC4-202ENST00000345795 CTAGE6Q86UF2 777 aa14.77□□□□□ -0.04
CASC4-202ENST00000345795 CTAGE4Q8IX94 777 aa14.77□□□□□ -0.04
CASC4-202ENST00000345795 BANK1Q8NDB2 785 aa14.77□□□□□ -0.04
CASC4-202ENST00000345795 OR8K1Q8NGG5 319 aa14.77□□□□□ -0.04
CASC4-202ENST00000345795 ERMNQ8TAM6 284 aa14.77□□□□□ -0.04
CASC4-202ENST00000345795 P2RX5Q93086 422 aa14.77□□□□□ -0.04
CASC4-202ENST00000345795 CNKSR1Q969H4 720 aa14.77□□□□□ -0.04
CASC4-202ENST00000345795 JAKMIP2Q96AA8 810 aa14.77□□□□□ -0.04
CASC4-202ENST00000345795 INTS13Q9NVM9 706 aa14.77□□□□□ -0.04
CASC4-202ENST00000345795 DUSP10Q9Y6W6 482 aa14.77□□□□□ -0.04
CASC4-202ENST00000345795 RASSF7Q02833 373 aa14.77□□□□□ -0.05
CASC4-202ENST00000345795 ADAM9Q13443 819 aa14.77□□□□□ -0.05
CASC4-202ENST00000345795 NBPF9Q3BBW0 867 aa14.77□□□□□ -0.05
CASC4-202ENST00000345795 NAA35Q5VZE5 725 aa14.77□□□□□ -0.05
CASC4-202ENST00000345795 CCDC65Q8IXS2 484 aa14.77□□□□□ -0.05
CASC4-202ENST00000345795 TTLL6Q8N841 843 aa14.77□□□□□ -0.05
CASC4-202ENST00000345795 TC2NQ8N9U0 490 aa14.77□□□□□ -0.05
CASC4-202ENST00000345795 GLIS2Q9BZE0 524 aaPredicted RBP14.77□□□□□ -0.05
CASC4-202ENST00000345795 GTPBP4Q9BZE4 634 aaKnown RBP14.77□□□□□ -0.05
CASC4-202ENST00000345795 FAM107BQ9H098 131 aa14.77□□□□□ -0.05
CASC4-202ENST00000345795 GOLPH3Q9H4A6 298 aa14.77□□□□□ -0.05
CASC4-202ENST00000345795 EPN1Q9Y6I3 576 aaPredicted RBP14.77□□□□□ -0.05
CASC4-202ENST00000345795 PNMA6FA0A0J9YX94 578 aa14.77□□□□□ -0.05
CASC4-202ENST00000345795 MYMKA6NI61 221 aa14.77□□□□□ -0.05
CASC4-202ENST00000345795 PSMD14O00487 310 aa14.77□□□□□ -0.05
CASC4-202ENST00000345795 ZBTB5O15062 677 aa14.77□□□□□ -0.05
CASC4-202ENST00000345795 USO1O60763 962 aaKnown RBP14.77□□□□□ -0.05
CASC4-202ENST00000345795 CCDC70Q6NSX1 233 aa14.77□□□□□ -0.05
CASC4-202ENST00000345795 DLK2Q6UY11 383 aa14.77□□□□□ -0.05
CASC4-202ENST00000345795 KCNK18Q7Z418 384 aa14.77□□□□□ -0.05
CASC4-202ENST00000345795 MYOCDQ8IZQ8 938 aa14.77□□□□□ -0.05
CASC4-202ENST00000345795 CCDC94Q9BW85 323 aaPredicted RBP14.77□□□□□ -0.05
CASC4-202ENST00000345795 RAVER2Q9HCJ3 691 aaKnown RBP14.77□□□□□ -0.05
CASC4-202ENST00000345795 PACSIN2Q9UNF0 486 aaPredicted RBP14.77□□□□□ -0.05
CASC4-202ENST00000345795 BICDL2A1A5D9 508 aa14.76□□□□□ -0.05
CASC4-202ENST00000345795 CYLC1P35663 651 aaPredicted RBP14.76□□□□□ -0.05
CASC4-202ENST00000345795 ASPRV1Q53RT3 343 aa14.76□□□□□ -0.05
CASC4-202ENST00000345795 ERO1AQ96HE7 468 aa14.76□□□□□ -0.05
CASC4-202ENST00000345795 HYOU1Q9Y4L1 999 aa14.76□□□□□ -0.05
CASC4-202ENST00000345795 ABCB11O95342 1321 aa14.76□□□□□ -0.05
CASC4-202ENST00000345795 PCP11498 1178 aaKnown RBP14.76□□□□□ -0.05
CASC4-202ENST00000345795 LMAN1P49257 510 aa14.76□□□□□ -0.05
CASC4-202ENST00000345795 ZNF543Q08ER8 600 aa14.76□□□□□ -0.05
CASC4-202ENST00000345795 FUT2Q10981 343 aa14.76□□□□□ -0.05
CASC4-202ENST00000345795 SLC35G1Q2M3R5 365 aa14.76□□□□□ -0.05
CASC4-202ENST00000345795 SBK1Q52WX2 424 aa14.76□□□□□ -0.05
CASC4-202ENST00000345795 CYP26C1Q6V0L0 522 aa14.76□□□□□ -0.05
CASC4-202ENST00000345795 MTERF4Q7Z6M4 381 aaKnown RBP14.76□□□□□ -0.05
CASC4-202ENST00000345795 RUFY1Q96T51 708 aa14.76□□□□□ -0.05
CASC4-202ENST00000345795 TRIM9Q9C026 710 aa14.76□□□□□ -0.05
CASC4-202ENST00000345795 CHORDC1Q9UHD1 332 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms