RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 PUM3Q15397 648 aaKnown RBP13.16□□□□□ -0.3
COL12A1-202ENST00000345356 NUDCD1Q96RS6 583 aa13.16□□□□□ -0.3
COL12A1-202ENST00000345356 CYP2J2P51589 502 aa13.16□□□□□ -0.3
COL12A1-202ENST00000345356 REXO1Q8N1G1 1221 aaKnown RBP13.16□□□□□ -0.3
COL12A1-202ENST00000345356 FAM133AQ8N9E0 248 aa13.16□□□□□ -0.3
COL12A1-202ENST00000345356 THAP9Q9H5L6 903 aa13.16□□□□□ -0.3
COL12A1-202ENST00000345356 ANAPC5Q9UJX4 755 aa13.16□□□□□ -0.3
COL12A1-202ENST00000345356 HMGXB3Q12766 1538 aa13.16□□□□□ -0.3
COL12A1-202ENST00000345356 ARHGEF35A5YM69 484 aa13.16□□□□□ -0.3
COL12A1-202ENST00000345356 OR52Z1P0C646 297 aa13.16□□□□□ -0.3
COL12A1-202ENST00000345356 MDH1P40925 334 aaKnown RBP13.16□□□□□ -0.3
COL12A1-202ENST00000345356 IRAK1P51617 712 aa13.16□□□□□ -0.3
COL12A1-202ENST00000345356 PPWD1Q96BP3 646 aaKnown RBP13.16□□□□□ -0.3
COL12A1-202ENST00000345356 PKD2L1Q9P0L9 805 aa13.16□□□□□ -0.3
COL12A1-202ENST00000345356 JAG2Q9Y219 1238 aa13.16□□□□□ -0.3
COL12A1-202ENST00000345356 PPP1R12AO14974 1030 aaPredicted RBP13.16□□□□□ -0.3
COL12A1-202ENST00000345356 STK10O94804 968 aaKnown RBP13.16□□□□□ -0.3
COL12A1-202ENST00000345356 ACSL3O95573 720 aa13.16□□□□□ -0.3
COL12A1-202ENST00000345356 INHBAP08476 426 aa13.16□□□□□ -0.3
COL12A1-202ENST00000345356 LMNB1P20700 586 aa13.16□□□□□ -0.3
COL12A1-202ENST00000345356 MTF1Q14872 753 aa13.16□□□□□ -0.3
COL12A1-202ENST00000345356 SYT2Q8N9I0 419 aaPredicted RBP13.16□□□□□ -0.3
COL12A1-202ENST00000345356 PAGE5Q96GU1 130 aa13.16□□□□□ -0.3
COL12A1-202ENST00000345356 TLR7Q9NYK1 1049 aaKnown RBP13.16□□□□□ -0.3
COL12A1-202ENST00000345356 DONSONQ9NYP3 566 aa13.16□□□□□ -0.3
COL12A1-202ENST00000345356 HARSP12081 509 aaKnown RBP13.15□□□□□ -0.3
COL12A1-202ENST00000345356 OLFM3Q96PB7 478 aa13.15□□□□□ -0.3
COL12A1-202ENST00000345356 FAM26FQ5R3K3 315 aa13.15□□□□□ -0.3
COL12A1-202ENST00000345356 NYAP1Q6ZVC0 841 aa13.15□□□□□ -0.3
COL12A1-202ENST00000345356 DRC3Q9H069 523 aa13.15□□□□□ -0.3
COL12A1-202ENST00000345356 SLC40A1Q9NP59 571 aa13.15□□□□□ -0.3
COL12A1-202ENST00000345356 SAP30BPQ9UHR5 308 aaKnown RBP13.15□□□□□ -0.3
COL12A1-202ENST00000345356 SEMA3EO15041 775 aa13.15□□□□□ -0.3
COL12A1-202ENST00000345356 ATP1A1P05023 1023 aaKnown RBP13.15□□□□□ -0.3
COL12A1-202ENST00000345356 CA4P22748 312 aa13.15□□□□□ -0.3
COL12A1-202ENST00000345356 SMTNP53814 917 aa13.15□□□□□ -0.3
COL12A1-202ENST00000345356 BSPRYQ5W0U4 402 aa13.15□□□□□ -0.3
COL12A1-202ENST00000345356 SMCR8Q8TEV9 937 aaPredicted RBP13.15□□□□□ -0.3
COL12A1-202ENST00000345356 LRGUKQ96M69 825 aa13.15□□□□□ -0.3
COL12A1-202ENST00000345356 AZI2Q9H6S1 392 aa13.15□□□□□ -0.3
COL12A1-202ENST00000345356 HPCAL4Q9UM19 191 aa13.15□□□□□ -0.3
COL12A1-202ENST00000345356 F8W031 263 aaPredicted RBP13.15□□□□□ -0.3
COL12A1-202ENST00000345356 PPARAQ07869 468 aa13.15□□□□□ -0.3
COL12A1-202ENST00000345356 SGO2Q562F6 1265 aa13.15□□□□□ -0.3
COL12A1-202ENST00000345356 NFRKBQ6P4R8 1299 aa13.15□□□□□ -0.3
COL12A1-202ENST00000345356 APOA5Q6Q788 366 aa13.15□□□□□ -0.3
COL12A1-202ENST00000345356 CALR3Q96L12 384 aaKnown RBP13.15□□□□□ -0.3
COL12A1-202ENST00000345356 BIN2Q9UBW5 565 aaPredicted RBP13.15□□□□□ -0.3
COL12A1-202ENST00000345356 SERPING1P05155 500 aa13.15□□□□□ -0.31
COL12A1-202ENST00000345356 SCP2P22307 547 aa13.15□□□□□ -0.31
COL12A1-202ENST00000345356 HOXC9P31274 260 aa13.15□□□□□ -0.31
COL12A1-202ENST00000345356 YWHAGP61981 247 aaKnown RBP eCLIP13.15□□□□□ -0.31
COL12A1-202ENST00000345356 CRYMQ14894 314 aa13.15□□□□□ -0.31
COL12A1-202ENST00000345356 RESP18Q5W5W9 173 aa13.15□□□□□ -0.31
COL12A1-202ENST00000345356 LRRC31Q6UY01 552 aa13.15□□□□□ -0.31
COL12A1-202ENST00000345356 TTLL7Q6ZT98 887 aa13.15□□□□□ -0.31
COL12A1-202ENST00000345356 PARP3Q9Y6F1 533 aa13.15□□□□□ -0.31
COL12A1-202ENST00000345356 KDM5CP41229 1560 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 EXOC1LA0A1B0GW35 172 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 CCDC188H7C350 402 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 PALMO75781 387 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 MRPS9P82933 396 aaKnown RBP13.14□□□□□ -0.31
COL12A1-202ENST00000345356 BFSP1Q12934 665 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 KAZNQ674X7 775 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 TRIM42Q8IWZ5 723 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 HIPK4Q8NE63 616 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 TMEM60Q9H2L4 133 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 MLXIPQ9HAP2 919 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 EPS15L1Q9UBC2 864 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 EXOC7Q9UPT5 735 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 NCKAP5LQ9HCH0 1330 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 SMCO2A6NFE2 343 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 IQCB1Q15051 598 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 LLGL1Q15334 1064 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 NAIF1Q69YI7 327 aaPredicted RBP13.14□□□□□ -0.31
COL12A1-202ENST00000345356 MAP7D3Q8IWC1 876 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 LGR6Q9HBX8 967 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 FMNL1O95466 1100 aaPredicted RBP13.14□□□□□ -0.31
COL12A1-202ENST00000345356 SCG2P13521 617 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 PCYT1AP49585 367 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 MMEL1Q495T6 779 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 MAGEF1Q9HAY2 307 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 MLXIPLQ9NP71 852 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 FGFR1OP2Q9NVK5 253 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 SRPRBQ9Y5M8 271 aaKnown RBP13.14□□□□□ -0.31
COL12A1-202ENST00000345356 KDM3AQ9Y4C1 1321 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 MED23Q9ULK4 1368 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 A0A0G2JND7 137 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 HSPA6P17066 643 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 EEF1DP29692 281 aaKnown RBP13.14□□□□□ -0.31
COL12A1-202ENST00000345356 FAM47AQ5JRC9 791 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 MAML1Q92585 1016 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 ZBTB10Q96DT7 871 aa13.14□□□□□ -0.31
COL12A1-202ENST00000345356 METTL14Q9HCE5 456 aaKnown RBP13.14□□□□□ -0.31
COL12A1-202ENST00000345356 PAIP2BQ9ULR5 123 aaKnown RBP13.14□□□□□ -0.31
COL12A1-202ENST00000345356 H2AFXP16104 143 aaPredicted RBP13.13□□□□□ -0.31
COL12A1-202ENST00000345356 NR5A1Q13285 461 aa13.13□□□□□ -0.31
COL12A1-202ENST00000345356 C16orf87Q6PH81 154 aa13.13□□□□□ -0.31
COL12A1-202ENST00000345356 LCA5Q86VQ0 697 aa13.13□□□□□ -0.31
COL12A1-202ENST00000345356 IFNL3Q8IZI9 196 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms