RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 KCNMB3Q9NPA1 279 aa28.41■■■□□ 2.14
TRADD-201ENST00000345057 STK24Q9Y6E0 443 aa28.41■■■□□ 2.14
TRADD-201ENST00000345057 DDNO94850 711 aaPredicted RBP28.4■■■□□ 2.14
TRADD-201ENST00000345057 BACE1P56817 501 aa28.4■■■□□ 2.14
TRADD-201ENST00000345057 MTMR2Q13614 643 aa28.4■■■□□ 2.14
TRADD-201ENST00000345057 CUL4BQ13620 913 aa28.4■■■□□ 2.14
TRADD-201ENST00000345057 LDHDQ86WU2 507 aa28.4■■■□□ 2.14
TRADD-201ENST00000345057 HAS1Q92839 578 aa28.4■■■□□ 2.14
TRADD-201ENST00000345057 MTRQ99707 1265 aa28.4■■■□□ 2.14
TRADD-201ENST00000345057 FBXO28Q9NVF7 368 aa28.4■■■□□ 2.14
TRADD-201ENST00000345057 RPN1P04843 607 aaKnown RBP28.4■■■□□ 2.14
TRADD-201ENST00000345057 KCNB1Q14721 858 aa28.4■■■□□ 2.14
TRADD-201ENST00000345057 NOL9Q5SY16 702 aaKnown RBP28.4■■■□□ 2.14
TRADD-201ENST00000345057 KLRG1Q96E93 195 aa28.4■■■□□ 2.14
TRADD-201ENST00000345057 LRRC27Q9C0I9 530 aa28.4■■■□□ 2.14
TRADD-201ENST00000345057 KDM3AQ9Y4C1 1321 aa28.39■■■□□ 2.14
TRADD-201ENST00000345057 C19orf81C9J6K1 198 aa28.39■■■□□ 2.14
TRADD-201ENST00000345057 CFBP00751 764 aa28.39■■■□□ 2.14
TRADD-201ENST00000345057 PTPRAP18433 802 aa28.39■■■□□ 2.14
TRADD-201ENST00000345057 SAMD3Q8N6K7 520 aa28.39■■■□□ 2.14
TRADD-201ENST00000345057 STAMQ92783 540 aa28.39■■■□□ 2.14
TRADD-201ENST00000345057 MMTAG2Q9BU76 263 aaKnown RBP28.39■■■□□ 2.14
TRADD-201ENST00000345057 TANGO6Q9C0B7 1094 aa28.39■■■□□ 2.14
TRADD-201ENST00000345057 BLZF1Q9H2G9 400 aa28.39■■■□□ 2.14
TRADD-201ENST00000345057 RABGAP1Q9Y3P9 1069 aa28.39■■■□□ 2.14
TRADD-201ENST00000345057 VCAM1P19320 739 aa28.38■■■□□ 2.13
TRADD-201ENST00000345057 SPP2Q13103 211 aa28.38■■■□□ 2.13
TRADD-201ENST00000345057 SNX29Q8TEQ0 813 aa28.38■■■□□ 2.13
TRADD-201ENST00000345057 DCPSQ96C86 337 aaKnown RBP28.38■■■□□ 2.13
TRADD-201ENST00000345057 FAM20AQ96MK3 541 aa28.38■■■□□ 2.13
TRADD-201ENST00000345057 CCPG1Q9ULG6 757 aa28.38■■■□□ 2.13
TRADD-201ENST00000345057 CTDP1Q9Y5B0 961 aaPredicted RBP28.38■■■□□ 2.13
TRADD-201ENST00000345057 CBFA2T2O43439 604 aa28.38■■■□□ 2.13
TRADD-201ENST00000345057 ZNF658Q5TYW1 1059 aaPredicted RBP28.38■■■□□ 2.13
TRADD-201ENST00000345057 DPY19L2Q6NUT2 758 aa28.38■■■□□ 2.13
TRADD-201ENST00000345057 MCF2L2Q86YR7 1114 aa28.38■■■□□ 2.13
TRADD-201ENST00000345057 SPC24Q8NBT2 197 aa28.38■■■□□ 2.13
TRADD-201ENST00000345057 NT5C3AQ9H0P0 336 aa28.38■■■□□ 2.13
TRADD-201ENST00000345057 CASP1P29466 404 aa28.37■■■□□ 2.13
TRADD-201ENST00000345057 HOXA13P31271 388 aaPredicted RBP28.37■■■□□ 2.13
TRADD-201ENST00000345057 C12orf42Q96LP6 360 aa28.37■■■□□ 2.13
TRADD-201ENST00000345057 EMILIN3Q9NT22 766 aa28.37■■■□□ 2.13
TRADD-201ENST00000345057 MAP3K20Q9NYL2 800 aaKnown RBP28.37■■■□□ 2.13
TRADD-201ENST00000345057 PPP1R9AQ9ULJ8 1098 aa28.37■■■□□ 2.13
TRADD-201ENST00000345057 FLOT1O75955 427 aa28.36■■■□□ 2.13
TRADD-201ENST00000345057 ZNF76P36508 570 aa28.36■■■□□ 2.13
TRADD-201ENST00000345057 C9orf131Q5VYM1 1079 aa28.36■■■□□ 2.13
TRADD-201ENST00000345057 SAMD1Q6SPF0 538 aaPredicted RBP28.36■■■□□ 2.13
TRADD-201ENST00000345057 ZKSCAN4Q969J2 545 aaPredicted RBP28.36■■■□□ 2.13
TRADD-201ENST00000345057 SLC38A10Q9HBR0 1119 aa28.36■■■□□ 2.13
TRADD-201ENST00000345057 POTEMA6NI47 508 aa28.36■■■□□ 2.13
TRADD-201ENST00000345057 ZBED4O75132 1171 aa28.36■■■□□ 2.13
TRADD-201ENST00000345057 YBX3P16989 372 aaKnown RBP eCLIP28.36■■■□□ 2.13
TRADD-201ENST00000345057 PRR16Q569H4 304 aa28.36■■■□□ 2.13
TRADD-201ENST00000345057 SV2BQ7L1I2 683 aa28.36■■■□□ 2.13
TRADD-201ENST00000345057 SULF1Q8IWU6 871 aa28.36■■■□□ 2.13
TRADD-201ENST00000345057 PLIN2Q99541 437 aa28.36■■■□□ 2.13
TRADD-201ENST00000345057 P2RX7Q99572 595 aaKnown RBP28.36■■■□□ 2.13
TRADD-201ENST00000345057 C7orf25Q9BPX7 421 aa28.36■■■□□ 2.13
TRADD-201ENST00000345057 RPAP3Q9H6T3 665 aaPredicted RBP28.36■■■□□ 2.13
TRADD-201ENST00000345057 GRB10Q13322 594 aa28.35■■■□□ 2.13
TRADD-201ENST00000345057 FCHSD1Q86WN1 690 aa28.35■■■□□ 2.13
TRADD-201ENST00000345057 HOXA7P31268 230 aaPredicted RBP28.34■■■□□ 2.13
TRADD-201ENST00000345057 DHX8Q14562 1220 aaKnown RBP28.34■■■□□ 2.13
TRADD-201ENST00000345057 GPR162Q16538 588 aa28.34■■■□□ 2.13
TRADD-201ENST00000345057 PRAMEF18Q5VWM3 479 aa28.34■■■□□ 2.13
TRADD-201ENST00000345057 HAUS3Q68CZ6 603 aa28.34■■■□□ 2.13
TRADD-201ENST00000345057 ETNPPLQ8TBG4 499 aa28.34■■■□□ 2.13
TRADD-201ENST00000345057 ZHX2Q9Y6X8 837 aa28.34■■■□□ 2.13
TRADD-201ENST00000345057 FANCCQ00597 558 aa28.34■■■□□ 2.13
TRADD-201ENST00000345057 HYIQ5T013 277 aa28.34■■■□□ 2.13
TRADD-201ENST00000345057 LARP4BQ92615 738 aaKnown RBP28.34■■■□□ 2.13
TRADD-201ENST00000345057 HSD3B7Q9H2F3 369 aa28.34■■■□□ 2.13
TRADD-201ENST00000345057 FANCLQ9NW38 375 aa28.34■■■□□ 2.13
TRADD-201ENST00000345057 NFE2L3Q9Y4A8 694 aa28.34■■■□□ 2.13
TRADD-201ENST00000345057 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.34■■■□□ 2.13
TRADD-201ENST00000345057 ZNF536O15090 1300 aa28.33■■■□□ 2.13
TRADD-201ENST00000345057 SYNRGQ9UMZ2 1314 aa28.33■■■□□ 2.13
TRADD-201ENST00000345057 RHOBTB3O94955 611 aa28.33■■■□□ 2.13
TRADD-201ENST00000345057 PPP1R2P41236 205 aa28.33■■■□□ 2.13
TRADD-201ENST00000345057 GHRHRQ02643 423 aa28.33■■■□□ 2.13
TRADD-201ENST00000345057 TMEM119Q4V9L6 283 aa28.33■■■□□ 2.13
TRADD-201ENST00000345057 SPATA1Q5VX52 437 aa28.33■■■□□ 2.13
TRADD-201ENST00000345057 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.33■■■□□ 2.13
TRADD-201ENST00000345057 ERMNQ8TAM6 284 aa28.33■■■□□ 2.13
TRADD-201ENST00000345057 TRIM9Q9C026 710 aa28.33■■■□□ 2.13
TRADD-201ENST00000345057 SSC5DA1L4H1 1573 aa28.33■■■□□ 2.13
TRADD-201ENST00000345057 ZC3H4Q9UPT8 1303 aaKnown RBP28.33■■■□□ 2.13
TRADD-201ENST00000345057 PPP1R3GB7ZBB8 358 aa28.32■■■□□ 2.12
TRADD-201ENST00000345057 SERPINC1P01008 464 aa28.32■■■□□ 2.12
TRADD-201ENST00000345057 TAL1P17542 331 aaPredicted RBP28.32■■■□□ 2.12
TRADD-201ENST00000345057 HSD17B4P51659 736 aa28.32■■■□□ 2.12
TRADD-201ENST00000345057 FMR1Q06787 632 aaKnown RBP eCLIP28.32■■■□□ 2.12
TRADD-201ENST00000345057 STIM1Q13586 685 aa28.32■■■□□ 2.12
TRADD-201ENST00000345057 PNMA5Q96PV4 448 aa28.32■■■□□ 2.12
TRADD-201ENST00000345057 TMOD4Q9NZQ9 345 aa28.32■■■□□ 2.12
TRADD-201ENST00000345057 IFNKQ9P0W0 207 aa28.32■■■□□ 2.12
TRADD-201ENST00000345057 IMPACTQ9P2X3 320 aa28.32■■■□□ 2.12
TRADD-201ENST00000345057 CLCN1P35523 988 aa28.32■■■□□ 2.12
TRADD-201ENST00000345057 RBM46Q8TBY0 533 aaKnown RBP28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms