RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 ZNF572Q7Z3I7 529 aaPredicted RBP25.72■■□□□ 1.71
NKX2-3-201ENST00000344586 MAPKAPK5Q8IW41 473 aa25.72■■□□□ 1.71
NKX2-3-201ENST00000344586 WDR66Q8TBY9 1149 aa25.72■■□□□ 1.71
NKX2-3-201ENST00000344586 RIN2Q8WYP3 895 aaPredicted RBP25.72■■□□□ 1.71
NKX2-3-201ENST00000344586 SETDB2Q96T68 719 aa25.72■■□□□ 1.71
NKX2-3-201ENST00000344586 IFIH1Q9BYX4 1025 aaKnown RBP25.72■■□□□ 1.71
NKX2-3-201ENST00000344586 MLXIPQ9HAP2 919 aa25.72■■□□□ 1.71
NKX2-3-201ENST00000344586 BLOC1S4Q9NUP1 217 aa25.72■■□□□ 1.71
NKX2-3-201ENST00000344586 PCDHA13Q9Y5I0 950 aa25.72■■□□□ 1.71
NKX2-3-201ENST00000344586 GNA11P29992 359 aa25.72■■□□□ 1.71
NKX2-3-201ENST00000344586 GRB10Q13322 594 aa25.72■■□□□ 1.71
NKX2-3-201ENST00000344586 C2CD5Q86YS7 1000 aa25.72■■□□□ 1.71
NKX2-3-201ENST00000344586 TBCKQ8TEA7 893 aa25.72■■□□□ 1.71
NKX2-3-201ENST00000344586 CALML4Q96GE6 196 aa25.72■■□□□ 1.71
NKX2-3-201ENST00000344586 TNRC6CQ9HCJ0 1690 aaKnown RBP25.71■■□□□ 1.71
NKX2-3-201ENST00000344586 LCA5LO95447 670 aa25.71■■□□□ 1.71
NKX2-3-201ENST00000344586 BAG3O95817 575 aa25.71■■□□□ 1.71
NKX2-3-201ENST00000344586 GGCXP38435 758 aa25.71■■□□□ 1.71
NKX2-3-201ENST00000344586 KIF11P52732 1056 aa25.71■■□□□ 1.71
NKX2-3-201ENST00000344586 GSTO1P78417 241 aa25.71■■□□□ 1.71
NKX2-3-201ENST00000344586 MMGT1Q8N4V1 131 aa25.71■■□□□ 1.71
NKX2-3-201ENST00000344586 GOLGA6L1Q8N7Z2 621 aa25.71■■□□□ 1.71
NKX2-3-201ENST00000344586 AENQ8WTP8 325 aaKnown RBP25.71■■□□□ 1.71
NKX2-3-201ENST00000344586 NDST4Q9H3R1 872 aa25.71■■□□□ 1.71
NKX2-3-201ENST00000344586 NARFQ9UHQ1 456 aa25.71■■□□□ 1.71
NKX2-3-201ENST00000344586 SPATA31A5Q5VU36 1347 aa25.71■■□□□ 1.71
NKX2-3-201ENST00000344586 SPATA31A7Q8IWB4 1347 aa25.71■■□□□ 1.71
NKX2-3-201ENST00000344586 AGPSO00116 658 aa25.7■■□□□ 1.71
NKX2-3-201ENST00000344586 USO1O60763 962 aaKnown RBP25.7■■□□□ 1.71
NKX2-3-201ENST00000344586 USP17L2Q6R6M4 530 aa25.7■■□□□ 1.71
NKX2-3-201ENST00000344586 RRP36Q96EU6 259 aaKnown RBP25.7■■□□□ 1.71
NKX2-3-201ENST00000344586 FAM207AQ9NSI2 230 aaPredicted RBP25.7■■□□□ 1.71
NKX2-3-201ENST00000344586 MYMKA6NI61 221 aa25.7■■□□□ 1.7
NKX2-3-201ENST00000344586 TACC1O75410 805 aa25.7■■□□□ 1.7
NKX2-3-201ENST00000344586 MOCS3O95396 460 aa25.7■■□□□ 1.7
NKX2-3-201ENST00000344586 ORC2Q13416 577 aaPredicted RBP25.7■■□□□ 1.7
NKX2-3-201ENST00000344586 PNMA5Q96PV4 448 aa25.7■■□□□ 1.7
NKX2-3-201ENST00000344586 CRACR2AQ9BSW2 395 aa25.7■■□□□ 1.7
NKX2-3-201ENST00000344586 RASSF4Q9H2L5 321 aa25.7■■□□□ 1.7
NKX2-3-201ENST00000344586 EIF4A3P38919 411 aaKnown RBP25.69■■□□□ 1.7
NKX2-3-201ENST00000344586 MAN2A1Q16706 1144 aa25.69■■□□□ 1.7
NKX2-3-201ENST00000344586 UNC13DQ70J99 1090 aa25.69■■□□□ 1.7
NKX2-3-201ENST00000344586 SV2BQ7L1I2 683 aa25.69■■□□□ 1.7
NKX2-3-201ENST00000344586 C10orf67Q8IYJ2 551 aa25.69■■□□□ 1.7
NKX2-3-201ENST00000344586 ZFP91Q96JP5 570 aaPredicted RBP25.69■■□□□ 1.7
NKX2-3-201ENST00000344586 MTMR9Q96QG7 549 aa25.69■■□□□ 1.7
NKX2-3-201ENST00000344586 EYA3Q99504 573 aa25.69■■□□□ 1.7
NKX2-3-201ENST00000344586 RTFDC1Q9BY42 306 aaPredicted RBP25.69■■□□□ 1.7
NKX2-3-201ENST00000344586 TXKP42681 527 aa25.68■■□□□ 1.7
NKX2-3-201ENST00000344586 ITIH3Q06033 890 aa25.68■■□□□ 1.7
NKX2-3-201ENST00000344586 EZH2Q15910 746 aaKnown RBP25.68■■□□□ 1.7
NKX2-3-201ENST00000344586 SOGA3Q5TF21 947 aa25.68■■□□□ 1.7
NKX2-3-201ENST00000344586 C16orf86Q6ZW13 317 aa25.68■■□□□ 1.7
NKX2-3-201ENST00000344586 TMEM260Q9NX78 707 aa25.68■■□□□ 1.7
NKX2-3-201ENST00000344586 BIN2Q9UBW5 565 aaPredicted RBP25.68■■□□□ 1.7
NKX2-3-201ENST00000344586 FAM184BQ9ULE4 1060 aa25.68■■□□□ 1.7
NKX2-3-201ENST00000344586 CDK5RAP2Q96SN8 1893 aa25.68■■□□□ 1.7
NKX2-3-201ENST00000344586 ABCB11O95342 1321 aa25.68■■□□□ 1.7
NKX2-3-201ENST00000344586 PRLRP16471 622 aa25.68■■□□□ 1.7
NKX2-3-201ENST00000344586 CDK8P49336 464 aa25.68■■□□□ 1.7
NKX2-3-201ENST00000344586 REXO1Q8N1G1 1221 aaKnown RBP25.68■■□□□ 1.7
NKX2-3-201ENST00000344586 DRC1Q96MC2 740 aa25.68■■□□□ 1.7
NKX2-3-201ENST00000344586 PIGSQ96S52 555 aa25.68■■□□□ 1.7
NKX2-3-201ENST00000344586 STK17AQ9UEE5 414 aa25.68■■□□□ 1.7
NKX2-3-201ENST00000344586 SEC63Q9UGP8 760 aaKnown RBP25.68■■□□□ 1.7
NKX2-3-201ENST00000344586 PVALEFA0A1B0GWK0 134 aa25.67■■□□□ 1.7
NKX2-3-201ENST00000344586 NEDD1Q8NHV4 660 aa25.67■■□□□ 1.7
NKX2-3-201ENST00000344586 HDAC7Q8WUI4 952 aa25.67■■□□□ 1.7
NKX2-3-201ENST00000344586 LRRC53A6NM62 1247 aa25.67■■□□□ 1.7
NKX2-3-201ENST00000344586 CCDC70Q6NSX1 233 aa25.67■■□□□ 1.7
NKX2-3-201ENST00000344586 BAP1Q92560 729 aa25.67■■□□□ 1.7
NKX2-3-201ENST00000344586 ZNF287Q9HBT7 754 aa25.67■■□□□ 1.7
NKX2-3-201ENST00000344586 ESYT2A0FGR8 921 aa25.66■■□□□ 1.7
NKX2-3-201ENST00000344586 FXR2P51116 673 aaKnown RBP eCLIP25.66■■□□□ 1.7
NKX2-3-201ENST00000344586 NFRKBQ6P4R8 1299 aa25.66■■□□□ 1.7
NKX2-3-201ENST00000344586 TPTE2Q6XPS3 522 aa25.66■■□□□ 1.7
NKX2-3-201ENST00000344586 LRRC55Q6ZSA7 311 aa25.66■■□□□ 1.7
NKX2-3-201ENST00000344586 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.66■■□□□ 1.7
NKX2-3-201ENST00000344586 GUF1Q8N442 669 aaKnown RBP25.66■■□□□ 1.7
NKX2-3-201ENST00000344586 LARP4BQ92615 738 aaKnown RBP25.66■■□□□ 1.7
NKX2-3-201ENST00000344586 RUBCNQ92622 972 aa25.66■■□□□ 1.7
NKX2-3-201ENST00000344586 OSBPL9Q96SU4 736 aa25.66■■□□□ 1.7
NKX2-3-201ENST00000344586 LRRC1Q9BTT6 524 aa25.66■■□□□ 1.7
NKX2-3-201ENST00000344586 DEF6Q9H4E7 631 aa25.66■■□□□ 1.7
NKX2-3-201ENST00000344586 MMRN2Q9H8L6 949 aa25.66■■□□□ 1.7
NKX2-3-201ENST00000344586 ANKIB1Q9P2G1 1089 aa25.66■■□□□ 1.7
NKX2-3-201ENST00000344586 SMARCA1P28370 1054 aa25.65■■□□□ 1.7
NKX2-3-201ENST00000344586 CALCRLQ16602 461 aa25.65■■□□□ 1.7
NKX2-3-201ENST00000344586 BARGINQ6ZT62 677 aa25.65■■□□□ 1.7
NKX2-3-201ENST00000344586 DYMQ7RTS9 669 aa25.65■■□□□ 1.7
NKX2-3-201ENST00000344586 CCDC84Q86UT8 332 aaPredicted RBP25.65■■□□□ 1.7
NKX2-3-201ENST00000344586 SPATA4Q8NEY3 305 aa25.65■■□□□ 1.7
NKX2-3-201ENST00000344586 VAT1LQ9HCJ6 419 aa25.65■■□□□ 1.7
NKX2-3-201ENST00000344586 GOLGA6BA6NDN3 693 aa25.65■■□□□ 1.7
NKX2-3-201ENST00000344586 SLC37A4O43826 429 aa25.65■■□□□ 1.7
NKX2-3-201ENST00000344586 LRRC63Q05C16 580 aa25.65■■□□□ 1.7
NKX2-3-201ENST00000344586 RRAGAQ7L523 313 aa25.65■■□□□ 1.7
NKX2-3-201ENST00000344586 GPIHBP1Q8IV16 184 aa25.65■■□□□ 1.7
NKX2-3-201ENST00000344586 BBXQ8WY36 941 aaPredicted RBP25.65■■□□□ 1.7
NKX2-3-201ENST00000344586 HINFPQ9BQA5 517 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms