RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 SYF2O95926 243 aaKnown RBP13.33□□□□□ -0.27
TRIOBP-202ENST00000344404 YWHAGP61981 247 aaKnown RBP eCLIP13.33□□□□□ -0.27
TRIOBP-202ENST00000344404 CDO1Q16878 200 aa13.33□□□□□ -0.27
TRIOBP-202ENST00000344404 KRT71Q3SY84 523 aa13.33□□□□□ -0.27
TRIOBP-202ENST00000344404 PDZD4Q76G19 769 aaPredicted RBP13.33□□□□□ -0.27
TRIOBP-202ENST00000344404 PGBD3Q8N328 593 aa13.33□□□□□ -0.27
TRIOBP-202ENST00000344404 HAUS1Q96CS2 278 aa13.33□□□□□ -0.27
TRIOBP-202ENST00000344404 KIAA0232Q92628 1395 aa13.33□□□□□ -0.27
TRIOBP-202ENST00000344404 SASH1O94885 1247 aa13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 RLBP1P12271 317 aa13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 GARSP41250 739 aaKnown RBP13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 CCDC38Q502W7 563 aa13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 RIC8AQ9NPQ8 531 aa13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 KRIT1O00522 736 aa13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 NEMP1O14524 444 aa13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 HNRNPDLO14979 420 aaKnown RBP13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 ADORA1P30542 326 aa13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 TMEM259Q4ZIN3 620 aa13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 MCF2L2Q86YR7 1114 aa13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 IFT122Q9HBG6 1241 aa13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 ATP10BO94823 1461 aa13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 BFSP1Q12934 665 aa13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 CDC37L1Q7L3B6 337 aa13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 SLC8A2Q9UPR5 921 aa13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 ERBB3P21860 1342 aa13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 HMGXB3Q12766 1538 aa13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 DENND3A2RUS2 1198 aa13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 CCND2P30279 289 aa13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 INPP5BP32019 993 aa13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 HDAC1Q13547 482 aaPredicted RBP13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 SMAD1Q15797 465 aaKnown RBP13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 COA7Q96BR5 231 aa13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 GPBP1L1Q9HC44 474 aaPredicted RBP13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 PPWD1Q96BP3 646 aaKnown RBP13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 CFAP36Q96G28 342 aa13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 NEUROG2Q9H2A3 272 aa13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 DDX41Q9UJV9 622 aaKnown RBP13.33□□□□□ -0.28
TRIOBP-202ENST00000344404 KLRF2D3W0D1 207 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 DPYSL4O14531 572 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 CLIC2O15247 247 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 RGS16O15492 202 aaPredicted RBP13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 LRRN2O75325 713 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 HOXA13P31271 388 aaPredicted RBP13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 COG4Q9H9E3 785 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 USP17L3A6NCW0 530 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 USP17L4A6NCW7 530 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 RNF8O76064 485 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 MESDQ14696 234 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 KRT40Q6A162 431 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 RSBN1LQ6PCB5 846 aaPredicted RBP13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 USP17L1Q7RTZ2 530 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 ATP1A2P50993 1020 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 ELMOD1Q8N336 334 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 ZSCAN10Q96SZ4 725 aaPredicted RBP13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 IBTKQ9P2D0 1353 aaPredicted RBP13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 CUTAO60888 179 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 GPC4O75487 556 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 LRCH2Q5VUJ6 765 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 MIS18BP1Q6P0N0 1132 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 CFAP61Q8NHU2 1237 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 RNF219Q5W0B1 726 aaPredicted RBP13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 TRMT10CQ7L0Y3 403 aaKnown RBP13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 IFNLR1Q8IU57 520 aaPredicted RBP13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 TTC25Q96NG3 672 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 NUP58Q9BVL2 599 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 SLC12A6Q9UHW9 1150 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 SNX14Q9Y5W7 946 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 VAMP4O75379 141 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 IL16Q14005 1332 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 CFAP221Q4G0U5 840 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 DSTYKQ6XUX3 929 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 NFE2L3Q9Y4A8 694 aa13.32□□□□□ -0.28
TRIOBP-202ENST00000344404 KDM3AQ9Y4C1 1321 aa13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 A0A0G2JLW4 131 aa13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 PNMA6EA0A0J9YXQ4 647 aa13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 FRMD3A2A2Y4 597 aa13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 POLR2BP30876 1174 aaKnown RBP13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 DCAF4L1Q3SXM0 396 aa13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 ACCSLQ4AC99 568 aa13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 P3H4Q92791 437 aa13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 RPGRIP1Q96KN7 1286 aa13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 FAM196BA6NMK8 535 aa13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 CABS1Q96KC9 395 aa13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 ABCA10Q8WWZ4 1543 aa13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 POLR3AO14802 1390 aaPredicted RBP13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 E7EWF7 191 aa13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 VCPP55072 806 aaKnown RBP13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 MYOCDQ8IZQ8 938 aa13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 BBS5Q8N3I7 341 aa13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 RNF139Q8WU17 664 aa13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 KIAA1024Q9UPX6 916 aa13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 NEURL1BA8MQ27 555 aa13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 RASGRP4Q8TDF6 673 aa13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 ARHGEF1Q92888 912 aaKnown RBP13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 DESI2Q9BSY9 194 aa13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 EEF1GP26641 437 aaKnown RBP13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 LTKP29376 864 aa13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 RASSF2P50749 326 aa13.31□□□□□ -0.28
TRIOBP-202ENST00000344404 TRIM14Q14142 442 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms