RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 CLMNQ96JQ2 1002 aa24.9■■□□□ 1.58
CACNB1-201ENST00000344140 SMCHD1A6NHR9 2005 aa24.9■■□□□ 1.58
CACNB1-201ENST00000344140 ALAS1P13196 640 aa24.89■■□□□ 1.58
CACNB1-201ENST00000344140 TXKP42681 527 aa24.89■■□□□ 1.58
CACNB1-201ENST00000344140 PPIL2Q13356 520 aa24.89■■□□□ 1.58
CACNB1-201ENST00000344140 MOB2Q70IA6 237 aa24.89■■□□□ 1.58
CACNB1-201ENST00000344140 IGSF22Q8N9C0 903 aa24.89■■□□□ 1.58
CACNB1-201ENST00000344140 PROCA1Q8NCQ7 364 aaPredicted RBP24.89■■□□□ 1.58
CACNB1-201ENST00000344140 CNKSR2Q8WXI2 1034 aa24.89■■□□□ 1.58
CACNB1-201ENST00000344140 TBC1D5Q92609 795 aa24.89■■□□□ 1.58
CACNB1-201ENST00000344140 OTUD5Q96G74 571 aa24.89■■□□□ 1.58
CACNB1-201ENST00000344140 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.89■■□□□ 1.58
CACNB1-201ENST00000344140 A0A0G2JLL6 359 aaPredicted RBP24.89■■□□□ 1.57
CACNB1-201ENST00000344140 TRAF5O00463 557 aa24.89■■□□□ 1.57
CACNB1-201ENST00000344140 TECP42680 631 aa24.89■■□□□ 1.57
CACNB1-201ENST00000344140 MDM2Q00987 491 aaPredicted RBP24.89■■□□□ 1.57
CACNB1-201ENST00000344140 PDIA5Q14554 519 aa24.89■■□□□ 1.57
CACNB1-201ENST00000344140 POSTNQ15063 836 aa24.89■■□□□ 1.57
CACNB1-201ENST00000344140 UVSSAQ2YD98 709 aa24.89■■□□□ 1.57
CACNB1-201ENST00000344140 ANO6Q4KMQ2 910 aa24.89■■□□□ 1.57
CACNB1-201ENST00000344140 LDLRAD1Q5T700 205 aa24.89■■□□□ 1.57
CACNB1-201ENST00000344140 PRRT2Q7Z6L0 340 aaPredicted RBP24.89■■□□□ 1.57
CACNB1-201ENST00000344140 FAM200AQ8TCP9 573 aa24.89■■□□□ 1.57
CACNB1-201ENST00000344140 CCDC39Q9UFE4 941 aa24.89■■□□□ 1.57
CACNB1-201ENST00000344140 TUBE1Q9UJT0 475 aa24.89■■□□□ 1.57
CACNB1-201ENST00000344140 PARP14Q460N5 1801 aa24.88■■□□□ 1.57
CACNB1-201ENST00000344140 IRF6O14896 467 aa24.88■■□□□ 1.57
CACNB1-201ENST00000344140 MARCH6O60337 910 aa24.88■■□□□ 1.57
CACNB1-201ENST00000344140 Q4G0T1 1027 aa24.88■■□□□ 1.57
CACNB1-201ENST00000344140 REPS2Q8NFH8 660 aa24.88■■□□□ 1.57
CACNB1-201ENST00000344140 ERCC4Q92889 916 aaPredicted RBP24.88■■□□□ 1.57
CACNB1-201ENST00000344140 ZNF408Q9H9D4 720 aa24.88■■□□□ 1.57
CACNB1-201ENST00000344140 KCNH4Q9UQ05 1017 aa24.88■■□□□ 1.57
CACNB1-201ENST00000344140 RABGAP1Q9Y3P9 1069 aa24.88■■□□□ 1.57
CACNB1-201ENST00000344140 ATP2A1O14983 1001 aa24.87■■□□□ 1.57
CACNB1-201ENST00000344140 PNOCQ13519 176 aa24.87■■□□□ 1.57
CACNB1-201ENST00000344140 E2F4Q16254 413 aa24.87■■□□□ 1.57
CACNB1-201ENST00000344140 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.87■■□□□ 1.57
CACNB1-201ENST00000344140 TBX3O15119 743 aa24.87■■□□□ 1.57
CACNB1-201ENST00000344140 SLFN12Q8IYM2 578 aa24.87■■□□□ 1.57
CACNB1-201ENST00000344140 SMC1BQ8NDV3 1235 aa24.87■■□□□ 1.57
CACNB1-201ENST00000344140 ANP32BQ92688 251 aaKnown RBP24.87■■□□□ 1.57
CACNB1-201ENST00000344140 HAS1Q92839 578 aa24.87■■□□□ 1.57
CACNB1-201ENST00000344140 KCNMB3Q9NPA1 279 aa24.87■■□□□ 1.57
CACNB1-201ENST00000344140 DISC1Q9NRI5 854 aa24.87■■□□□ 1.57
CACNB1-201ENST00000344140 RLFQ13129 1914 aa24.87■■□□□ 1.57
CACNB1-201ENST00000344140 NFIBO00712 420 aa24.86■■□□□ 1.57
CACNB1-201ENST00000344140 TOMM70O94826 608 aa24.86■■□□□ 1.57
CACNB1-201ENST00000344140 CDC25AP30304 524 aa24.86■■□□□ 1.57
CACNB1-201ENST00000344140 HOXA7P31268 230 aaPredicted RBP24.86■■□□□ 1.57
CACNB1-201ENST00000344140 RASSF8Q8NHQ8 419 aa24.86■■□□□ 1.57
CACNB1-201ENST00000344140 WNK4Q96J92 1243 aa24.86■■□□□ 1.57
CACNB1-201ENST00000344140 TRERF1Q96PN7 1200 aa24.86■■□□□ 1.57
CACNB1-201ENST00000344140 TTC12Q9H892 705 aaPredicted RBP24.86■■□□□ 1.57
CACNB1-201ENST00000344140 SPDYE16A6NNV3 312 aaPredicted RBP24.85■■□□□ 1.57
CACNB1-201ENST00000344140 ZNF76P36508 570 aa24.85■■□□□ 1.57
CACNB1-201ENST00000344140 SH3RF1Q7Z6J0 888 aa24.85■■□□□ 1.57
CACNB1-201ENST00000344140 CABP7Q86V35 215 aa24.85■■□□□ 1.57
CACNB1-201ENST00000344140 LRWD1Q9UFC0 647 aa24.85■■□□□ 1.57
CACNB1-201ENST00000344140 PTPRFP10586 1907 aa24.85■■□□□ 1.57
CACNB1-201ENST00000344140 PP2D1A8MPX8 630 aa24.85■■□□□ 1.57
CACNB1-201ENST00000344140 STAT6P42226 847 aa24.85■■□□□ 1.57
CACNB1-201ENST00000344140 FKBP1BP68106 108 aa24.85■■□□□ 1.57
CACNB1-201ENST00000344140 KARSQ15046 597 aaKnown RBP24.85■■□□□ 1.57
CACNB1-201ENST00000344140 TKFCQ3LXA3 575 aa24.85■■□□□ 1.57
CACNB1-201ENST00000344140 PRR16Q569H4 304 aa24.85■■□□□ 1.57
CACNB1-201ENST00000344140 TREML2Q5T2D2 321 aa24.85■■□□□ 1.57
CACNB1-201ENST00000344140 RRAGBQ5VZM2 374 aa24.85■■□□□ 1.57
CACNB1-201ENST00000344140 GADL1Q6ZQY3 521 aa24.85■■□□□ 1.57
CACNB1-201ENST00000344140 OPTNQ96CV9 577 aa24.85■■□□□ 1.57
CACNB1-201ENST00000344140 PAGE5Q96GU1 130 aa24.85■■□□□ 1.57
CACNB1-201ENST00000344140 TEX13BQ9BXU2 312 aa24.85■■□□□ 1.57
CACNB1-201ENST00000344140 MAF1Q9H063 256 aa24.85■■□□□ 1.57
CACNB1-201ENST00000344140 NAT10Q9H0A0 1025 aaKnown RBP24.85■■□□□ 1.57
CACNB1-201ENST00000344140 DNAJC25Q9H1X3 360 aa24.85■■□□□ 1.57
CACNB1-201ENST00000344140 HOMER2Q9NSB8 354 aa24.85■■□□□ 1.57
CACNB1-201ENST00000344140 ZNF214Q9UL59 606 aaPredicted RBP24.85■■□□□ 1.57
CACNB1-201ENST00000344140 PCDHA12Q9UN75 941 aa24.85■■□□□ 1.57
CACNB1-201ENST00000344140 PCDHA5Q9Y5H7 936 aa24.85■■□□□ 1.57
CACNB1-201ENST00000344140 ZNF165P49910 485 aa24.84■■□□□ 1.57
CACNB1-201ENST00000344140 NLRP12P59046 1061 aa24.84■■□□□ 1.57
CACNB1-201ENST00000344140 FMR1Q06787 632 aaKnown RBP eCLIP24.84■■□□□ 1.57
CACNB1-201ENST00000344140 MUM1L1Q5H9M0 696 aa24.84■■□□□ 1.57
CACNB1-201ENST00000344140 NT5DC1Q5TFE4 455 aa24.84■■□□□ 1.57
CACNB1-201ENST00000344140 SNRNP48Q6IEG0 339 aaKnown RBP24.84■■□□□ 1.57
CACNB1-201ENST00000344140 FAM20AQ96MK3 541 aa24.84■■□□□ 1.57
CACNB1-201ENST00000344140 CUEDC2Q9H467 287 aa24.84■■□□□ 1.57
CACNB1-201ENST00000344140 FAM86B1E9PN63 330 aa24.83■■□□□ 1.57
CACNB1-201ENST00000344140 FOXN1O15353 648 aa24.83■■□□□ 1.57
CACNB1-201ENST00000344140 SMC2O95347 1197 aa24.83■■□□□ 1.57
CACNB1-201ENST00000344140 ITGBL1O95965 494 aaPredicted RBP24.83■■□□□ 1.57
CACNB1-201ENST00000344140 FAM86B2P0C5J1 330 aa24.83■■□□□ 1.57
CACNB1-201ENST00000344140 TMEM132BQ14DG7 1078 aa24.83■■□□□ 1.57
CACNB1-201ENST00000344140 PDXDC2PQ6P474 469 aa24.83■■□□□ 1.57
CACNB1-201ENST00000344140 MB21D1Q8N884 522 aa24.83■■□□□ 1.57
CACNB1-201ENST00000344140 RNF146Q9NTX7 359 aa24.83■■□□□ 1.57
CACNB1-201ENST00000344140 FASTKD5Q7L8L6 764 aaKnown RBP24.83■■□□□ 1.56
CACNB1-201ENST00000344140 ETNPPLQ8TBG4 499 aa24.83■■□□□ 1.56
CACNB1-201ENST00000344140 SMARCE1Q969G3 411 aa24.83■■□□□ 1.56
CACNB1-201ENST00000344140 LENG9Q96B70 501 aa24.83■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms