RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 CTNNA1P35221 906 aaKnown RBP7.91□□□□□ -1.14
VCAN-202ENST00000342785 ST3GAL1Q11201 340 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 MTF1Q14872 753 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 CEP170BQ9Y4F5 1589 aaPredicted RBP7.91□□□□□ -1.14
VCAN-202ENST00000342785 CXCR5P32302 372 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 CASP8Q14790 479 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 SPICE1Q8N0Z3 855 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 DNAI2Q9GZS0 605 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 EPB41L4AQ9HCS5 686 aaPredicted RBP7.91□□□□□ -1.14
VCAN-202ENST00000342785 NKIRAS1Q9NYS0 192 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 CEP83Q9Y592 693 aa7.91□□□□□ -1.14
VCAN-202ENST00000342785 TTC26A0AVF1 554 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 PPIP5K2O43314 1243 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 FMR1Q06787 632 aaKnown RBP eCLIP7.9□□□□□ -1.14
VCAN-202ENST00000342785 MTMR3Q13615 1198 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 CC2D1AQ6P1N0 951 aaPredicted RBP7.9□□□□□ -1.14
VCAN-202ENST00000342785 NLGN1Q8N2Q7 840 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 ZCCHC17Q9NP64 241 aaKnown RBP7.9□□□□□ -1.14
VCAN-202ENST00000342785 ADAMTS1Q9UHI8 967 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 FAM184BQ9ULE4 1060 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 KCNJ6P48051 423 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 ODR4Q5SWX8 454 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 MIER3Q7Z3K6 550 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 SH3RF3Q8TEJ3 882 aaPredicted RBP7.9□□□□□ -1.14
VCAN-202ENST00000342785 IFT74Q96LB3 600 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 DPH5Q9H2P9 285 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 SH3GLB2Q9NR46 395 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 EMILIN3Q9NT22 766 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 ABHD10Q9NUJ1 306 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.9□□□□□ -1.14
VCAN-202ENST00000342785 NARFQ9UHQ1 456 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 RABGAP1Q9Y3P9 1069 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 AP5Z1O43299 807 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 UBE2SQ16763 222 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 DPH6Q7L8W6 267 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 ZNF34Q8IZ26 560 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 HEXIM1O94992 359 aaKnown RBP7.9□□□□□ -1.14
VCAN-202ENST00000342785 KIF11P52732 1056 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 ATP2C1P98194 919 aaPredicted RBP7.9□□□□□ -1.14
VCAN-202ENST00000342785 ABCB5Q2M3G0 1257 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 KCTD16Q68DU8 428 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 GOLGA5Q8TBA6 731 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 PPM1EQ8WY54 764 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 EXOC4Q96A65 974 aa7.9□□□□□ -1.14
VCAN-202ENST00000342785 ZNF512BQ96KM6 892 aaPredicted RBP7.9□□□□□ -1.14
VCAN-202ENST00000342785 THRAP3Q9Y2W1 955 aaKnown RBP7.9□□□□□ -1.14
VCAN-202ENST00000342785 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.9□□□□□ -1.14
VCAN-202ENST00000342785 POLR2MP0CAP2 368 aa7.9□□□□□ -1.15
VCAN-202ENST00000342785 NAA35Q5VZE5 725 aa7.9□□□□□ -1.15
VCAN-202ENST00000342785 ORC4O43929 436 aa7.9□□□□□ -1.15
VCAN-202ENST00000342785 RNF40O75150 1001 aa7.9□□□□□ -1.15
VCAN-202ENST00000342785 PPP1R14CQ8TAE6 165 aa7.9□□□□□ -1.15
VCAN-202ENST00000342785 CCDC127Q96BQ5 260 aa7.9□□□□□ -1.15
VCAN-202ENST00000342785 KRT12Q99456 494 aa7.9□□□□□ -1.15
VCAN-202ENST00000342785 MPHOSPH6Q99547 160 aaKnown RBP7.9□□□□□ -1.15
VCAN-202ENST00000342785 CAPS2Q9BXY5 557 aa7.9□□□□□ -1.15
VCAN-202ENST00000342785 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.9□□□□□ -1.15
VCAN-202ENST00000342785 PPANQ9NQ55 473 aaKnown RBP7.9□□□□□ -1.15
VCAN-202ENST00000342785 POTEMA6NI47 508 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 KCNQ2O43526 872 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 ZBTB16Q05516 673 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 SF3A3Q12874 501 aaKnown RBP eCLIP7.89□□□□□ -1.15
VCAN-202ENST00000342785 TXNRD1Q16881 649 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 RBM43Q6ZSC3 357 aaKnown RBP7.89□□□□□ -1.15
VCAN-202ENST00000342785 ADAT2Q7Z6V5 191 aaKnown RBP7.89□□□□□ -1.15
VCAN-202ENST00000342785 POTEDQ86YR6 584 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 SRBD1Q8N5C6 995 aaKnown RBP7.89□□□□□ -1.15
VCAN-202ENST00000342785 IWS1Q96ST2 819 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 RAB17Q9H0T7 212 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 DKC1O60832 514 aaKnown RBP eCLIP7.89□□□□□ -1.15
VCAN-202ENST00000342785 FTCDO95954 541 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 PDE6BP35913 854 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 LRRC63Q05C16 580 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 CROCCP2Q86T23 111 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 SWAP70Q9UH65 585 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 SETD1BQ9UPS6 1966 aaKnown RBP7.89□□□□□ -1.15
VCAN-202ENST00000342785 E7EVH7 732 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 MEIS1O00470 390 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 PPFIA4O75335 1185 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 ALAS1P13196 640 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 EPB41L5Q9HCM4 733 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 ADAM21Q9UKJ8 722 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 MRPL11Q9Y3B7 192 aaKnown RBP7.89□□□□□ -1.15
VCAN-202ENST00000342785 BZW2Q9Y6E2 419 aaKnown RBP7.89□□□□□ -1.15
VCAN-202ENST00000342785 TADA3O75528 432 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 MOCS3O95396 460 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 ARHGAP25P42331 645 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 GYS2P54840 703 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 PPP2R5EQ16537 467 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 LIN9Q5TKA1 542 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 GAS8O95995 478 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 PLA2G4BP0C869 781 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 TMED8Q6PL24 325 aaPredicted RBP7.89□□□□□ -1.15
VCAN-202ENST00000342785 PPM1KQ8N3J5 372 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 FAM133AQ8N9E0 248 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 CD209Q9NNX6 404 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 NEURL4Q96JN8 1562 aa7.89□□□□□ -1.15
VCAN-202ENST00000342785 EPHB4P54760 987 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 UBXN2AP68543 259 aa7.88□□□□□ -1.15
VCAN-202ENST00000342785 PSMD2Q13200 908 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms