RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 SREBF1P36956 1147 aa22.49■■□□□ 1.19
RTN1-202ENST00000342503 KIAA1683Q9H0B3 1180 aa22.49■■□□□ 1.19
RTN1-202ENST00000342503 SYNRGQ9UMZ2 1314 aa22.49■■□□□ 1.19
RTN1-202ENST00000342503 WDR46O15213 610 aaKnown RBP22.48■■□□□ 1.19
RTN1-202ENST00000342503 ZNF18P17022 549 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 STX17P56962 302 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 UBASH3AP57075 661 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 PRAMEF18Q5VWM3 479 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 SNX29Q8TEQ0 813 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 NUDT12Q9BQG2 462 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 KCNMB3Q9NPA1 279 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 CBFA2T2O43439 604 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 EPS15P42566 896 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 DGKZQ13574 1117 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 KCNB1Q14721 858 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 KMT5BQ4FZB7 885 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 HSP90AA4PQ58FG1 418 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 SPATA1Q5VX52 437 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 KRT79Q5XKE5 535 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 TBC1D5Q92609 795 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 LPAR1Q92633 364 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 CDK5RAP3Q96JB5 506 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 UIMC1Q96RL1 719 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 C7orf25Q9BPX7 421 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 ZNF112Q9UJU3 913 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 PYCARDQ9ULZ3 195 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 PCDHA12Q9UN75 941 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 CTNND2Q9UQB3 1225 aa22.48■■□□□ 1.19
RTN1-202ENST00000342503 MRPL11Q9Y3B7 192 aaKnown RBP22.48■■□□□ 1.19
RTN1-202ENST00000342503 CFBP00751 764 aa22.47■■□□□ 1.19
RTN1-202ENST00000342503 HIRAP54198 1017 aaPredicted RBP22.47■■□□□ 1.19
RTN1-202ENST00000342503 LRMPQ12912 555 aa22.47■■□□□ 1.19
RTN1-202ENST00000342503 Q4G0T1 1027 aa22.47■■□□□ 1.19
RTN1-202ENST00000342503 FILIP1Q7Z7B0 1213 aa22.47■■□□□ 1.19
RTN1-202ENST00000342503 TEX2Q8IWB9 1127 aa22.47■■□□□ 1.19
RTN1-202ENST00000342503 CACTINQ8WUQ7 758 aaKnown RBP22.47■■□□□ 1.19
RTN1-202ENST00000342503 SAMSN1Q9NSI8 373 aaKnown RBP22.47■■□□□ 1.19
RTN1-202ENST00000342503 BLOC1S4Q9NUP1 217 aa22.47■■□□□ 1.19
RTN1-202ENST00000342503 GGA3Q9NZ52 723 aa22.47■■□□□ 1.19
RTN1-202ENST00000342503 GDAQ9Y2T3 454 aa22.47■■□□□ 1.19
RTN1-202ENST00000342503 ABCB11O95342 1321 aa22.47■■□□□ 1.19
RTN1-202ENST00000342503 TMEM119Q4V9L6 283 aa22.46■■□□□ 1.19
RTN1-202ENST00000342503 PRR16Q569H4 304 aa22.46■■□□□ 1.19
RTN1-202ENST00000342503 TMC6Q7Z403 805 aa22.46■■□□□ 1.19
RTN1-202ENST00000342503 FCHSD1Q86WN1 690 aa22.46■■□□□ 1.19
RTN1-202ENST00000342503 LDHDQ86WU2 507 aa22.46■■□□□ 1.19
RTN1-202ENST00000342503 HOOK2Q96ED9 719 aa22.46■■□□□ 1.19
RTN1-202ENST00000342503 NAP1L5Q96NT1 182 aaPredicted RBP22.46■■□□□ 1.19
RTN1-202ENST00000342503 TRIM9Q9C026 710 aa22.46■■□□□ 1.19
RTN1-202ENST00000342503 IMPACTQ9P2X3 320 aa22.46■■□□□ 1.19
RTN1-202ENST00000342503 STK17AQ9UEE5 414 aa22.46■■□□□ 1.19
RTN1-202ENST00000342503 POLR2AP24928 1970 aaKnown RBP22.46■■□□□ 1.19
RTN1-202ENST00000342503 GCOM1H8Y6P7 765 aaPredicted RBP22.45■■□□□ 1.19
RTN1-202ENST00000342503 CYP3A4P08684 503 aa22.45■■□□□ 1.19
RTN1-202ENST00000342503 POLR2MP0CAP2 368 aa22.45■■□□□ 1.19
RTN1-202ENST00000342503 CDK11BP21127 795 aaKnown RBP22.45■■□□□ 1.19
RTN1-202ENST00000342503 SCYL3Q8IZE3 742 aa22.45■■□□□ 1.19
RTN1-202ENST00000342503 SLF1Q9BQI6 1058 aa22.45■■□□□ 1.19
RTN1-202ENST00000342503 RHOBTB3O94955 611 aa22.45■■□□□ 1.18
RTN1-202ENST00000342503 CIITAP33076 1130 aa22.45■■□□□ 1.18
RTN1-202ENST00000342503 AMPD3Q01432 767 aa22.45■■□□□ 1.18
RTN1-202ENST00000342503 MTMR2Q13614 643 aa22.45■■□□□ 1.18
RTN1-202ENST00000342503 DHX8Q14562 1220 aaKnown RBP22.45■■□□□ 1.18
RTN1-202ENST00000342503 MCM6Q14566 821 aa22.45■■□□□ 1.18
RTN1-202ENST00000342503 ARID5BQ14865 1188 aa22.45■■□□□ 1.18
RTN1-202ENST00000342503 SV2BQ7L1I2 683 aa22.45■■□□□ 1.18
RTN1-202ENST00000342503 SLFN12Q8IYM2 578 aa22.45■■□□□ 1.18
RTN1-202ENST00000342503 PRPF38AQ8NAV1 312 aaKnown RBP22.45■■□□□ 1.18
RTN1-202ENST00000342503 ETNPPLQ8TBG4 499 aa22.45■■□□□ 1.18
RTN1-202ENST00000342503 LENG9Q96B70 501 aa22.45■■□□□ 1.18
RTN1-202ENST00000342503 FZD1Q9UP38 647 aa22.45■■□□□ 1.18
RTN1-202ENST00000342503 PHIPQ8WWQ0 1821 aa22.44■■□□□ 1.18
RTN1-202ENST00000342503 FAM86B1E9PN63 330 aa22.44■■□□□ 1.18
RTN1-202ENST00000342503 FAM86B2P0C5J1 330 aa22.44■■□□□ 1.18
RTN1-202ENST00000342503 SEMA3FQ13275 785 aa22.44■■□□□ 1.18
RTN1-202ENST00000342503 ECM1Q16610 540 aa22.44■■□□□ 1.18
RTN1-202ENST00000342503 C17orf53Q8N3J3 647 aaPredicted RBP22.44■■□□□ 1.18
RTN1-202ENST00000342503 LARP4BQ92615 738 aaKnown RBP22.44■■□□□ 1.18
RTN1-202ENST00000342503 RAD54LQ92698 747 aa22.44■■□□□ 1.18
RTN1-202ENST00000342503 ZKSCAN4Q969J2 545 aaPredicted RBP22.44■■□□□ 1.18
RTN1-202ENST00000342503 AGBL1Q96MI9 1066 aa22.44■■□□□ 1.18
RTN1-202ENST00000342503 WRNIP1Q96S55 665 aa22.44■■□□□ 1.18
RTN1-202ENST00000342503 EMILIN3Q9NT22 766 aa22.44■■□□□ 1.18
RTN1-202ENST00000342503 RWDD2AQ9UIY3 292 aa22.44■■□□□ 1.18
RTN1-202ENST00000342503 PARP14Q460N5 1801 aa22.44■■□□□ 1.18
RTN1-202ENST00000342503 TBX3O15119 743 aa22.43■■□□□ 1.18
RTN1-202ENST00000342503 COBLO75128 1261 aa22.43■■□□□ 1.18
RTN1-202ENST00000342503 ICAM1P05362 532 aa22.43■■□□□ 1.18
RTN1-202ENST00000342503 PRCPP42785 496 aa22.43■■□□□ 1.18
RTN1-202ENST00000342503 ASIC1P78348 528 aa22.43■■□□□ 1.18
RTN1-202ENST00000342503 PAK1Q13153 545 aa22.43■■□□□ 1.18
RTN1-202ENST00000342503 LRRC8AQ8IWT6 810 aa22.43■■□□□ 1.18
RTN1-202ENST00000342503 KIAA1524Q8TCG1 905 aa22.43■■□□□ 1.18
RTN1-202ENST00000342503 NELFBQ8WX92 580 aa22.43■■□□□ 1.18
RTN1-202ENST00000342503 TANGO6Q9C0B7 1094 aa22.43■■□□□ 1.18
RTN1-202ENST00000342503 PPP2R3BQ9Y5P8 575 aa22.43■■□□□ 1.18
RTN1-202ENST00000342503 ZNF536O15090 1300 aa22.43■■□□□ 1.18
RTN1-202ENST00000342503 DDNO94850 711 aaPredicted RBP22.43■■□□□ 1.18
RTN1-202ENST00000342503 ZNF76P36508 570 aa22.43■■□□□ 1.18
RTN1-202ENST00000342503 USP14P54578 494 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms