RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 CFBP00751 764 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 XRCC5P13010 732 aaKnown RBP13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 PLCG2P16885 1265 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 USP14P54578 494 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 DPYDQ12882 1025 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 NTRK3Q16288 839 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 RASGRP2Q7LDG7 609 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 MS4A14Q96JA4 679 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 PSTPIP2Q9H939 334 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 FAM184BQ9ULE4 1060 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 KIF20BQ96Q89 1820 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 ANKRD40Q6AI12 368 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 SAMD15Q9P1V8 674 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 DDX25Q9UHL0 483 aaKnown RBP13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 NR2F2P24468 414 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 STK4Q13043 487 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 E2F5Q15329 346 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 CCDC174Q6PII3 467 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 GSTA5Q7RTV2 222 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 POTEDQ86YR6 584 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 BICD1Q96G01 975 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 FRMD3A2A2Y4 597 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 GOLGA8KD6RF30 607 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 CYP19A1P11511 503 aaPredicted RBP13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 ATP2C1P98194 919 aaPredicted RBP13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 TNIP1Q15025 636 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 MAN2A1Q16706 1144 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 PFKFB3Q16875 520 aaPredicted RBP13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 AEBP2Q6ZN18 517 aaPredicted RBP13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 RASAL2Q9UJF2 1139 aa13.68□□□□□ -0.22
SNRNP48-201ENST00000342415 WDR19Q8NEZ3 1342 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 EXOC3O60645 756 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 PLEKP08567 350 aaPredicted RBP13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 EPHB4P54760 987 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 UBXN2AP68543 259 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 ALX1Q15699 326 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 STXBP4Q6ZWJ1 553 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 ANKRD42Q8N9B4 389 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 TACO1Q9BSH4 297 aaKnown RBP13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 TMEM60Q9H2L4 133 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 FEZ2Q9UHY8 353 aaPredicted RBP13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 ATP8A1Q9Y2Q0 1164 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 SFI1A8K8P3 1242 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 PPP1R3GB7ZBB8 358 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 CASP7P55210 303 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 CALCOCO2Q13137 446 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 SRLQ86TD4 932 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 FAM169AQ9Y6X4 670 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 PREX1Q8TCU6 1659 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 ABCC12Q96J65 1359 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 CCDC172P0C7W6 258 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 SLCO1A2P46721 670 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 SNAP25P60880 206 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 FKBP3Q00688 224 aaKnown RBP13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 RUFY4Q6ZNE9 571 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 CCDC105Q8IYK2 499 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 SH3RF3Q8TEJ3 882 aaPredicted RBP13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 COG1Q8WTW3 980 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 THAP9Q9H5L6 903 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 INTS13Q9NVM9 706 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 FRMD4BQ9Y2L6 1034 aa13.67□□□□□ -0.22
SNRNP48-201ENST00000342415 PALMO75781 387 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 ABL1P00519 1130 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 CSF1RP07333 972 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 CETN2P41208 172 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 VWA3BQ502W6 1294 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 CCDC170Q8IYT3 715 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 STIM2Q9P246 746 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 MTRF1LQ9UGC7 380 aaKnown RBP13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 GGA1Q9UJY5 639 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 MINPP1Q9UNW1 487 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 SALL1Q9NSC2 1324 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 WTIPA6NIX2 430 aaPredicted RBP13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 LRRN2O75325 713 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 BEND6Q5SZJ8 279 aaPredicted RBP13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 TRAPPC3LQ5T215 181 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 CCDC91Q7Z6B0 441 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 DDX12PQ92771 950 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 TBC1D31Q96DN5 1066 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 A0A087X0B3 334 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 LRRIQ3A6PVS8 624 aaPredicted RBP13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 KRT14P02533 472 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 STAT1P42224 750 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 KCTD19Q17RG1 926 aaPredicted RBP13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 IL17RAQ96F46 866 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 TMEM47Q9BQJ4 181 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 PHF20Q9BVI0 1012 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 LACRTQ9GZZ8 138 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 SPATA31A3Q5VYP0 1347 aa13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 ZNF335Q9H4Z2 1342 aaPredicted RBP13.66□□□□□ -0.22
SNRNP48-201ENST00000342415 SEMA3EO15041 775 aa13.65□□□□□ -0.22
SNRNP48-201ENST00000342415 H2AFZP0C0S5 128 aa13.65□□□□□ -0.22
SNRNP48-201ENST00000342415 TRIM28Q13263 835 aaKnown RBP13.65□□□□□ -0.22
SNRNP48-201ENST00000342415 DOK7Q18PE1 504 aa13.65□□□□□ -0.22
SNRNP48-201ENST00000342415 H2AFVQ71UI9 128 aa13.65□□□□□ -0.22
SNRNP48-201ENST00000342415 SPICE1Q8N0Z3 855 aa13.65□□□□□ -0.22
SNRNP48-201ENST00000342415 JPH2Q9BR39 696 aaPredicted RBP13.65□□□□□ -0.22
SNRNP48-201ENST00000342415 GOLPH3Q9H4A6 298 aa13.65□□□□□ -0.22
SNRNP48-201ENST00000342415 FAM217BQ9NTX9 383 aaPredicted RBP13.65□□□□□ -0.22
SNRNP48-201ENST00000342415 ASIC3Q9UHC3 531 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms