RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 GJD3Q8N144 294 aa20■□□□□ 0.79
TRA2B-202ENST00000342294 GADD45GIP1Q8TAE8 222 aaPredicted RBP20■□□□□ 0.79
TRA2B-202ENST00000342294 COPS5Q92905 334 aa20■□□□□ 0.79
TRA2B-202ENST00000342294 STX8Q9UNK0 236 aa20■□□□□ 0.79
TRA2B-202ENST00000342294 COL4A4P53420 1690 aaPredicted RBP20■□□□□ 0.79
TRA2B-202ENST00000342294 RAD50Q92878 1312 aa20■□□□□ 0.79
TRA2B-202ENST00000342294 NMT2O60551 498 aa19.99■□□□□ 0.79
TRA2B-202ENST00000342294 SLC3A2P08195 630 aaKnown RBP19.99■□□□□ 0.79
TRA2B-202ENST00000342294 DEFB103AP81534 67 aa19.99■□□□□ 0.79
TRA2B-202ENST00000342294 PPP2R5BQ15173 497 aa19.99■□□□□ 0.79
TRA2B-202ENST00000342294 CAGE1Q8TC20 777 aa19.99■□□□□ 0.79
TRA2B-202ENST00000342294 AFAP1L1Q8TED9 768 aa19.99■□□□□ 0.79
TRA2B-202ENST00000342294 SCFD2Q8WU76 684 aa19.99■□□□□ 0.79
TRA2B-202ENST00000342294 CLEC4DQ8WXI8 215 aa19.99■□□□□ 0.79
TRA2B-202ENST00000342294 NACAP1Q9BZK3 213 aa19.99■□□□□ 0.79
TRA2B-202ENST00000342294 PTPRSQ13332 1948 aa19.98■□□□□ 0.79
TRA2B-202ENST00000342294 GJB5O95377 273 aa19.98■□□□□ 0.79
TRA2B-202ENST00000342294 CXCL10P02778 98 aa19.98■□□□□ 0.79
TRA2B-202ENST00000342294 RBL2Q08999 1139 aa19.98■□□□□ 0.79
TRA2B-202ENST00000342294 PTGISQ16647 500 aa19.98■□□□□ 0.79
TRA2B-202ENST00000342294 TCTN1Q2MV58 587 aa19.98■□□□□ 0.79
TRA2B-202ENST00000342294 TTBK2Q6IQ55 1244 aa19.98■□□□□ 0.79
TRA2B-202ENST00000342294 SLC30A10Q6XR72 485 aa19.98■□□□□ 0.79
TRA2B-202ENST00000342294 SESTD1Q86VW0 696 aa19.98■□□□□ 0.79
TRA2B-202ENST00000342294 SEC62Q99442 399 aaKnown RBP19.98■□□□□ 0.79
TRA2B-202ENST00000342294 RAD9AQ99638 391 aa19.98■□□□□ 0.79
TRA2B-202ENST00000342294 ZBED2Q9BTP6 218 aa19.98■□□□□ 0.79
TRA2B-202ENST00000342294 NOD1Q9Y239 953 aa19.98■□□□□ 0.79
TRA2B-202ENST00000342294 PTPDC1A2A3K4 754 aa19.97■□□□□ 0.79
TRA2B-202ENST00000342294 LINC01553A4QN01 128 aa19.97■□□□□ 0.79
TRA2B-202ENST00000342294 SELPP16109 830 aa19.97■□□□□ 0.79
TRA2B-202ENST00000342294 CNKSR3Q6P9H4 555 aa19.97■□□□□ 0.79
TRA2B-202ENST00000342294 CCDC155Q8N6L0 562 aa19.97■□□□□ 0.79
TRA2B-202ENST00000342294 DCAF4Q8WV16 495 aa19.97■□□□□ 0.79
TRA2B-202ENST00000342294 DHX38Q92620 1227 aaKnown RBP19.97■□□□□ 0.79
TRA2B-202ENST00000342294 TGS1Q96RS0 853 aaKnown RBP19.97■□□□□ 0.79
TRA2B-202ENST00000342294 NAPBQ9H115 298 aa19.97■□□□□ 0.79
TRA2B-202ENST00000342294 INCENPQ9NQS7 918 aa19.97■□□□□ 0.79
TRA2B-202ENST00000342294 TSPY2A6NKD2 308 aa19.96■□□□□ 0.79
TRA2B-202ENST00000342294 NBNO60934 754 aa19.96■□□□□ 0.79
TRA2B-202ENST00000342294 ARIH2O95376 493 aa19.96■□□□□ 0.79
TRA2B-202ENST00000342294 PARNO95453 639 aaKnown RBP19.96■□□□□ 0.79
TRA2B-202ENST00000342294 TXNP10599 105 aaKnown RBP19.96■□□□□ 0.79
TRA2B-202ENST00000342294 CALML3P27482 149 aa19.96■□□□□ 0.79
TRA2B-202ENST00000342294 SLC16A2P36021 539 aa19.96■□□□□ 0.79
TRA2B-202ENST00000342294 PDE4DQ08499 809 aa19.96■□□□□ 0.79
TRA2B-202ENST00000342294 SYDE2Q5VT97 1194 aa19.96■□□□□ 0.79
TRA2B-202ENST00000342294 TSHZ3Q63HK5 1081 aa19.96■□□□□ 0.79
TRA2B-202ENST00000342294 GDF6Q6KF10 455 aaPredicted RBP19.96■□□□□ 0.79
TRA2B-202ENST00000342294 LRRC8DQ7L1W4 858 aa19.96■□□□□ 0.79
TRA2B-202ENST00000342294 MTUS1Q9ULD2 1270 aa19.96■□□□□ 0.79
TRA2B-202ENST00000342294 ABHD14A-ACY1A0A1B0GW23 586 aa19.95■□□□□ 0.78
TRA2B-202ENST00000342294 FOXP2O15409 715 aa19.95■□□□□ 0.78
TRA2B-202ENST00000342294 ALADP13716 330 aa19.95■□□□□ 0.78
TRA2B-202ENST00000342294 IL9P15248 144 aa19.95■□□□□ 0.78
TRA2B-202ENST00000342294 KCNA5P22460 613 aa19.95■□□□□ 0.78
TRA2B-202ENST00000342294 MRE11P49959 708 aa19.95■□□□□ 0.78
TRA2B-202ENST00000342294 CCDC96Q2M329 555 aa19.95■□□□□ 0.78
TRA2B-202ENST00000342294 CCDC62Q6P9F0 684 aa19.95■□□□□ 0.78
TRA2B-202ENST00000342294 RNF207Q6ZRF8 634 aa19.95■□□□□ 0.78
TRA2B-202ENST00000342294 DNERQ8NFT8 737 aa19.95■□□□□ 0.78
TRA2B-202ENST00000342294 GRXCR2A6NFK2 248 aa19.94■□□□□ 0.78
TRA2B-202ENST00000342294 RPS6P62753 249 aaKnown RBP19.94■□□□□ 0.78
TRA2B-202ENST00000342294 HNRNPUQ00839 825 aaKnown RBP eCLIP19.94■□□□□ 0.78
TRA2B-202ENST00000342294 PTCRAQ6ISU1 281 aaPredicted RBP19.94■□□□□ 0.78
TRA2B-202ENST00000342294 KAT2BQ92831 832 aa19.94■□□□□ 0.78
TRA2B-202ENST00000342294 MTMR7Q9Y216 660 aa19.94■□□□□ 0.78
TRA2B-202ENST00000342294 POTEB3A0JP26 581 aa19.93■□□□□ 0.78
TRA2B-202ENST00000342294 CKBP12277 381 aa19.93■□□□□ 0.78
TRA2B-202ENST00000342294 CTDSPL2Q05D32 466 aa19.93■□□□□ 0.78
TRA2B-202ENST00000342294 ZMYM1Q5SVZ6 1142 aa19.93■□□□□ 0.78
TRA2B-202ENST00000342294 POTEBQ6S5H4 581 aa19.93■□□□□ 0.78
TRA2B-202ENST00000342294 NEK9Q8TD19 979 aa19.93■□□□□ 0.78
TRA2B-202ENST00000342294 AFG1LQ8WV93 481 aa19.93■□□□□ 0.78
TRA2B-202ENST00000342294 GPATCH3Q96I76 525 aa19.93■□□□□ 0.78
TRA2B-202ENST00000342294 MPHOSPH6Q99547 160 aaKnown RBP19.93■□□□□ 0.78
TRA2B-202ENST00000342294 CHMP4BQ9H444 224 aaKnown RBP19.93■□□□□ 0.78
TRA2B-202ENST00000342294 TRIP12Q14669 1992 aaPredicted RBP19.92■□□□□ 0.78
TRA2B-202ENST00000342294 EFCAB14O75071 495 aa19.92■□□□□ 0.78
TRA2B-202ENST00000342294 MMP3P08254 477 aa19.92■□□□□ 0.78
TRA2B-202ENST00000342294 SSTR3P32745 418 aaPredicted RBP19.92■□□□□ 0.78
TRA2B-202ENST00000342294 CHMP4BP1P59074 171 aa19.92■□□□□ 0.78
TRA2B-202ENST00000342294 NHLH1Q02575 133 aa19.92■□□□□ 0.78
TRA2B-202ENST00000342294 TRAF7Q6Q0C0 670 aa19.92■□□□□ 0.78
TRA2B-202ENST00000342294 PNMA2Q9UL42 364 aa19.92■□□□□ 0.78
TRA2B-202ENST00000342294 ORC4O43929 436 aa19.91■□□□□ 0.78
TRA2B-202ENST00000342294 FGRP09769 529 aa19.91■□□□□ 0.78
TRA2B-202ENST00000342294 ARHGAP1Q07960 439 aa19.91■□□□□ 0.78
TRA2B-202ENST00000342294 TRIM71Q2Q1W2 868 aaKnown RBP19.91■□□□□ 0.78
TRA2B-202ENST00000342294 PUS10Q3MIT2 529 aaKnown RBP19.91■□□□□ 0.78
TRA2B-202ENST00000342294 UIMC1Q96RL1 719 aa19.91■□□□□ 0.78
TRA2B-202ENST00000342294 C17orf80Q9BSJ5 609 aa19.91■□□□□ 0.78
TRA2B-202ENST00000342294 KCNH6Q9H252 994 aa19.91■□□□□ 0.78
TRA2B-202ENST00000342294 GTF2IRD1Q9UHL9 959 aa19.91■□□□□ 0.78
TRA2B-202ENST00000342294 ANAPC4Q9UJX5 808 aa19.91■□□□□ 0.78
TRA2B-202ENST00000342294 B4DLN1 442 aa19.9■□□□□ 0.78
TRA2B-202ENST00000342294 RBAK-RBAKDNI3L0D1 243 aa19.9■□□□□ 0.78
TRA2B-202ENST00000342294 RANBP6O60518 1105 aaKnown RBP19.9■□□□□ 0.78
TRA2B-202ENST00000342294 MRPL12P52815 198 aaKnown RBP19.9■□□□□ 0.78
TRA2B-202ENST00000342294 MKRN4PQ13434 485 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms