RNA–Protein interactions for RNA: ENST00000341948.6

PCDHB13-201, Transcript of protocadherin beta 13, humanhuman

APPRIS P1 BASIC

Gene PCDHB13, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13-201ENST00000341948 PPP6R2O75170 966 aa16.58■□□□□ 0.24
PCDHB13-201ENST00000341948 CSF1RP07333 972 aa16.58■□□□□ 0.24
PCDHB13-201ENST00000341948 SESTD1Q86VW0 696 aa16.58■□□□□ 0.24
PCDHB13-201ENST00000341948 APOL6Q9BWW8 343 aa16.58■□□□□ 0.24
PCDHB13-201ENST00000341948 ANO3Q9BYT9 981 aa16.58■□□□□ 0.24
PCDHB13-201ENST00000341948 ST7Q9NRC1 585 aa16.58■□□□□ 0.24
PCDHB13-201ENST00000341948 NEDD4P46934 1319 aa16.58■□□□□ 0.24
PCDHB13-201ENST00000341948 ADKP55263 362 aaKnown RBP16.58■□□□□ 0.24
PCDHB13-201ENST00000341948 ADAM9Q13443 819 aa16.58■□□□□ 0.24
PCDHB13-201ENST00000341948 UBL4BQ8N7F7 174 aa16.58■□□□□ 0.24
PCDHB13-201ENST00000341948 OR8K1Q8NGG5 319 aa16.58■□□□□ 0.24
PCDHB13-201ENST00000341948 NACC1Q96RE7 527 aa16.58■□□□□ 0.24
PCDHB13-201ENST00000341948 MMS19Q96T76 1030 aa16.58■□□□□ 0.24
PCDHB13-201ENST00000341948 VPS18Q9P253 973 aa16.58■□□□□ 0.24
PCDHB13-201ENST00000341948 GSG1L2A8MUP6 293 aa16.58■□□□□ 0.24
PCDHB13-201ENST00000341948 SELENOSQ9BQE4 189 aa16.58■□□□□ 0.24
PCDHB13-201ENST00000341948 RAVER2Q9HCJ3 691 aaKnown RBP16.58■□□□□ 0.24
PCDHB13-201ENST00000341948 CDC25AP30304 524 aa16.57■□□□□ 0.24
PCDHB13-201ENST00000341948 TMTC3Q6ZXV5 915 aa16.57■□□□□ 0.24
PCDHB13-201ENST00000341948 MRFAP1L1Q96HT8 127 aa16.57■□□□□ 0.24
PCDHB13-201ENST00000341948 SMIM23A6NLE4 172 aa16.57■□□□□ 0.24
PCDHB13-201ENST00000341948 ZEB2O60315 1214 aa16.57■□□□□ 0.24
PCDHB13-201ENST00000341948 ATP2A2P16615 1042 aaKnown RBP16.57■□□□□ 0.24
PCDHB13-201ENST00000341948 FBXO40Q9UH90 709 aa16.57■□□□□ 0.24
PCDHB13-201ENST00000341948 MST1RQ04912 1400 aa16.57■□□□□ 0.24
PCDHB13-201ENST00000341948 F5H6K3 240 aa16.57■□□□□ 0.24
PCDHB13-201ENST00000341948 KLRC3Q07444 240 aa16.57■□□□□ 0.24
PCDHB13-201ENST00000341948 FANCLQ9NW38 375 aa16.57■□□□□ 0.24
PCDHB13-201ENST00000341948 MEIS1O00470 390 aa16.57■□□□□ 0.24
PCDHB13-201ENST00000341948 LARGE1O95461 756 aa16.57■□□□□ 0.24
PCDHB13-201ENST00000341948 NSUN4Q96CB9 384 aaKnown RBP16.57■□□□□ 0.24
PCDHB13-201ENST00000341948 EEF2KMTQ96G04 330 aa16.57■□□□□ 0.24
PCDHB13-201ENST00000341948 USTQ9Y2C2 406 aa16.57■□□□□ 0.24
PCDHB13-201ENST00000341948 PCDHA5Q9Y5H7 936 aa16.57■□□□□ 0.24
PCDHB13-201ENST00000341948 ZBTB5O15062 677 aa16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 RNASE9P60153 205 aaKnown RBP16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 SPATA1Q5VX52 437 aa16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 SNRNP48Q6IEG0 339 aaKnown RBP16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 RCSD1Q6JBY9 416 aa16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 PDXDC2PQ6P474 469 aa16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 CUEDC2Q9H467 287 aa16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 MAGEF1Q9HAY2 307 aa16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 HERC5Q9UII4 1024 aaKnown RBP16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 ATP2C2O75185 946 aa16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 RASA3Q14644 834 aa16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 TYW1BQ6NUM6 668 aa16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 LSM14BQ9BX40 385 aaKnown RBP16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 IFIH1Q9BYX4 1025 aaKnown RBP16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 FEM1BQ9UK73 627 aa16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 ENAHQ8N8S7 591 aaPredicted RBP16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 RPS6KC1Q96S38 1066 aa16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 DAGLAQ9Y4D2 1042 aa16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 STAT1P42224 750 aa16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 ALX1Q15699 326 aa16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 MTERF2Q49AM1 385 aa16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 EP400NLQ6ZTU2 488 aa16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 ABI1Q8IZP0 508 aa16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 METTL14Q9HCE5 456 aaKnown RBP16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 RSPH14Q9UHP6 348 aa16.56■□□□□ 0.24
PCDHB13-201ENST00000341948 ACTN4O43707 911 aaKnown RBP16.55■□□□□ 0.24
PCDHB13-201ENST00000341948 CYB5R4Q7L1T6 521 aa16.55■□□□□ 0.24
PCDHB13-201ENST00000341948 RMDN3Q96TC7 470 aa16.55■□□□□ 0.24
PCDHB13-201ENST00000341948 CCDC94Q9BW85 323 aaPredicted RBP16.55■□□□□ 0.24
PCDHB13-201ENST00000341948 C1orf112Q9NSG2 853 aa16.55■□□□□ 0.24
PCDHB13-201ENST00000341948 ZNF215Q9UL58 517 aaPredicted RBP16.55■□□□□ 0.24
PCDHB13-201ENST00000341948 CACNB1Q02641 598 aaPredicted RBP16.55■□□□□ 0.24
PCDHB13-201ENST00000341948 UBLCP1Q8WVY7 318 aaPredicted RBP16.55■□□□□ 0.24
PCDHB13-201ENST00000341948 ATF7P17544 494 aaPredicted RBP16.55■□□□□ 0.24
PCDHB13-201ENST00000341948 ZFP91Q96JP5 570 aaPredicted RBP16.55■□□□□ 0.24
PCDHB13-201ENST00000341948 TSKSQ9UJT2 592 aa16.55■□□□□ 0.24
PCDHB13-201ENST00000341948 RCOR1Q9UKL0 485 aa16.55■□□□□ 0.24
PCDHB13-201ENST00000341948 ABCC12Q96J65 1359 aa16.55■□□□□ 0.24
PCDHB13-201ENST00000341948 DNAJC21Q5F1R6 531 aaKnown RBP16.55■□□□□ 0.24
PCDHB13-201ENST00000341948 STYK1Q6J9G0 422 aa16.55■□□□□ 0.24
PCDHB13-201ENST00000341948 INTS5Q6P9B9 1019 aaKnown RBP16.55■□□□□ 0.24
PCDHB13-201ENST00000341948 ZBTB9Q96C00 473 aa16.55■□□□□ 0.24
PCDHB13-201ENST00000341948 GSDMAQ96QA5 445 aa16.55■□□□□ 0.24
PCDHB13-201ENST00000341948 PODXL2Q9NZ53 605 aa16.55■□□□□ 0.24
PCDHB13-201ENST00000341948 NUB1Q9Y5A7 615 aa16.55■□□□□ 0.24
PCDHB13-201ENST00000341948 FAM170AA1A519 330 aa16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 CEP104O60308 925 aa16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 U2AF2P26368 475 aaKnown RBP eCLIP16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 PDIA6Q15084 440 aa16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 NBPF11Q86T75 865 aa16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 MYRIPQ8NFW9 859 aa16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 FTOQ9C0B1 505 aaKnown RBP eCLIP16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 TXNDC16Q9P2K2 825 aa16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 FERP16591 822 aa16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 ERCC5P28715 1186 aaPredicted RBP16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 ARL1P40616 181 aaPredicted RBP16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 C6orf163Q5TEZ5 329 aa16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 GBP6Q6ZN66 633 aa16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 COL23A1Q86Y22 540 aaPredicted RBP16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 IPO4Q8TEX9 1081 aaKnown RBP16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 KMT5AQ9NQR1 393 aa16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 PSAPP07602 524 aa16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 GAS2L3Q86XJ1 694 aa16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 SYCE1Q8N0S2 351 aa16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 LINC00301Q8NCQ3 95 aa16.54■□□□□ 0.24
PCDHB13-201ENST00000341948 RNF146Q9NTX7 359 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms