RNA–Protein interactions for RNA: ENST00000341165.10

NBR1-201, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBR1, Length 4,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-201ENST00000341165 FBXO38Q6PIJ6 1188 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 SNX29Q8TEQ0 813 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 LARP4BQ92615 738 aaKnown RBP8.87□□□□□ -0.99
NBR1-201ENST00000341165 TUBGCP2Q9BSJ2 902 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 RIOX1Q9H6W3 641 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 CDC23Q9UJX2 597 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 CEP83Q9Y592 693 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 EPN1Q9Y6I3 576 aaPredicted RBP8.87□□□□□ -0.99
NBR1-201ENST00000341165 FRMPD2Q68DX3 1309 aaPredicted RBP8.87□□□□□ -0.99
NBR1-201ENST00000341165 BAZ2AQ9UIF9 1905 aaKnown RBP8.87□□□□□ -0.99
NBR1-201ENST00000341165 GCKP35557 465 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 EPS15P42566 896 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 MAP3K9P80192 1104 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 CKAP4Q07065 602 aaKnown RBP8.87□□□□□ -0.99
NBR1-201ENST00000341165 TXNRD1Q16881 649 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 HHIPL2Q6UWX4 724 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 FAM212AQ96EL1 285 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 TMEM60Q9H2L4 133 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 MRFAP1Q9Y605 127 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 MYH13Q9UKX3 1938 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 ECM29Q5VYK3 1845 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 TMEM139Q8IV31 216 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 LRRC47Q8N1G4 583 aaKnown RBP8.87□□□□□ -0.99
NBR1-201ENST00000341165 TANGO6Q9C0B7 1094 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 RIC8AQ9NPQ8 531 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 CYTH3O43739 400 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 PDHBP11177 359 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 PBX1P40424 430 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 BRD3Q15059 726 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 IL17AQ16552 155 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 UNC13DQ70J99 1090 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 KRT27Q7Z3Y8 459 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 SRGAP1Q7Z6B7 1085 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 CCDC65Q8IXS2 484 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 TRIM9Q9C026 710 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 PSTPIP2Q9H939 334 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 EFCC1Q9HA90 598 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 TMOD2Q9NZR1 351 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 POLLQ9UGP5 575 aa8.87□□□□□ -0.99
NBR1-201ENST00000341165 NHSQ6T4R5 1651 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 A0A1B0GUA9 196 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 WNT7AO00755 349 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 TADA3O75528 432 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 KIF4AO95239 1232 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 SSBP05455 408 aaKnown RBP eCLIP8.86□□□□□ -0.99
NBR1-201ENST00000341165 FXR2P51116 673 aaKnown RBP eCLIP8.86□□□□□ -0.995e-7■■□□□ 13.5
NBR1-201ENST00000341165 RNF187Q5TA31 235 aaPredicted RBP8.86□□□□□ -0.99
NBR1-201ENST00000341165 CCDC170Q8IYT3 715 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 CAGE1Q8TC20 777 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 FBXO41Q8TF61 875 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 CNOT6LQ96LI5 555 aaKnown RBP8.86□□□□□ -0.99
NBR1-201ENST00000341165 NUCKS1Q9H1E3 243 aaKnown RBP8.86□□□□□ -0.99
NBR1-201ENST00000341165 QTRT2Q9H974 415 aaKnown RBP8.86□□□□□ -0.99
NBR1-201ENST00000341165 DDX25Q9UHL0 483 aaKnown RBP8.86□□□□□ -0.99
NBR1-201ENST00000341165 COL24A1Q17RW2 1714 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 GYPCP04921 128 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 RHBDL3P58872 404 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 EVX2Q03828 476 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 HAUS3Q68CZ6 603 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 FAM107BQ9H098 131 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 TMEM51Q9NW97 253 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 A0A1B0GUL6 1792 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 LAMB1P07942 1786 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 M0R2N6 131 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 GNA14O95837 355 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 LRRC63Q05C16 580 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 NAA30Q147X3 362 aaPredicted RBP8.86□□□□□ -0.99
NBR1-201ENST00000341165 CACNA2D4Q7Z3S7 1137 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 PODNQ7Z5L7 613 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 SLFN12Q8IYM2 578 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 DCAF4Q8WV16 495 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 MASTLQ96GX5 879 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 CCDC42Q96M95 316 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 SLF1Q9BQI6 1058 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 CAPN11Q9UMQ6 739 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 PLIN4Q96Q06 1357 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 ZBTB5O15062 677 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 CCDC172P0C7W6 258 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 SLC1A4P43007 532 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 EIF6P56537 245 aaKnown RBP8.86□□□□□ -0.99
NBR1-201ENST00000341165 ZBED6P86452 979 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 KIF5AQ12840 1032 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 MAP9Q49MG5 647 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 RPGRIP1Q96KN7 1286 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 KANSL2Q9H9L4 492 aa8.86□□□□□ -0.99
NBR1-201ENST00000341165 CASZ1Q86V15 1759 aa8.85□□□□□ -0.99
NBR1-201ENST00000341165 PP2D1A8MPX8 630 aa8.85□□□□□ -0.99
NBR1-201ENST00000341165 ZNF543Q08ER8 600 aa8.85□□□□□ -0.99
NBR1-201ENST00000341165 CCDC40Q4G0X9 1142 aa8.85□□□□□ -0.99
NBR1-201ENST00000341165 CCDC122Q5T0U0 273 aa8.85□□□□□ -0.99
NBR1-201ENST00000341165 ALS2CR12Q96Q35 445 aa8.85□□□□□ -0.99
NBR1-201ENST00000341165 EHMT1Q9H9B1 1298 aa8.85□□□□□ -0.99
NBR1-201ENST00000341165 GOPCQ9HD26 462 aa8.85□□□□□ -0.99
NBR1-201ENST00000341165 GUCA1BQ9UMX6 200 aa8.85□□□□□ -0.99
NBR1-201ENST00000341165 BTAF1O14981 1849 aa8.85□□□□□ -0.99
NBR1-201ENST00000341165 DLEC1Q9Y238 1755 aa8.85□□□□□ -0.99
NBR1-201ENST00000341165 NDUFA10O95299 355 aa8.85□□□□□ -0.99
NBR1-201ENST00000341165 CLNS1AP54105 237 aaKnown RBP8.85□□□□□ -0.99
NBR1-201ENST00000341165 GRIK5Q16478 980 aa8.85□□□□□ -0.99
NBR1-201ENST00000341165 PPP4R3AQ6IN85 833 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms