RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 N4BP3O15049 544 aa13.93□□□□□ -0.18
DFFB-202ENST00000339350 MFAP3LO75121 409 aa13.93□□□□□ -0.18
DFFB-202ENST00000339350 SMIM24O75264 130 aa13.93□□□□□ -0.18
DFFB-202ENST00000339350 ERVK-24P63145 666 aa13.93□□□□□ -0.18
DFFB-202ENST00000339350 PUM3Q15397 648 aaKnown RBP13.93□□□□□ -0.18
DFFB-202ENST00000339350 SPATA1Q5VX52 437 aa13.93□□□□□ -0.18
DFFB-202ENST00000339350 RRAGBQ5VZM2 374 aa13.93□□□□□ -0.18
DFFB-202ENST00000339350 ZNF280DQ6N043 979 aa13.93□□□□□ -0.18
DFFB-202ENST00000339350 GPIHBP1Q8IV16 184 aa13.93□□□□□ -0.18
DFFB-202ENST00000339350 ZNF570Q96NI8 536 aa13.93□□□□□ -0.18
DFFB-202ENST00000339350 SELENOOQ9BVL4 669 aa13.93□□□□□ -0.18
DFFB-202ENST00000339350 PLA2G12BQ9BX93 195 aa13.93□□□□□ -0.18
DFFB-202ENST00000339350 PHACTR1Q9C0D0 580 aa13.93□□□□□ -0.18
DFFB-202ENST00000339350 C15orf41Q9Y2V0 281 aa13.93□□□□□ -0.18
DFFB-202ENST00000339350 L3MBTL1Q9Y468 752 aa13.93□□□□□ -0.18
DFFB-202ENST00000339350 MYH2Q9UKX2 1941 aa13.92□□□□□ -0.18
DFFB-202ENST00000339350 STK36Q9NRP7 1315 aa13.92□□□□□ -0.18
DFFB-202ENST00000339350 ABCA3Q99758 1704 aa13.92□□□□□ -0.18
DFFB-202ENST00000339350 CTAGE9A4FU28 777 aa13.92□□□□□ -0.18
DFFB-202ENST00000339350 VEGFAP15692 232 aaPredicted RBP13.92□□□□□ -0.18
DFFB-202ENST00000339350 ALDH1B1P30837 517 aa13.92□□□□□ -0.18
DFFB-202ENST00000339350 SEC24CP53992 1094 aa13.92□□□□□ -0.18
DFFB-202ENST00000339350 TUBB4BP68371 445 aa13.92□□□□□ -0.18
DFFB-202ENST00000339350 MTRQ99707 1265 aa13.92□□□□□ -0.18
DFFB-202ENST00000339350 ABCC12Q96J65 1359 aa13.92□□□□□ -0.18
DFFB-202ENST00000339350 LGR5O75473 907 aa13.92□□□□□ -0.18
DFFB-202ENST00000339350 ANP32DO95626 131 aa13.92□□□□□ -0.18
DFFB-202ENST00000339350 FERP16591 822 aa13.92□□□□□ -0.18
DFFB-202ENST00000339350 GCLCP48506 637 aaPredicted RBP13.92□□□□□ -0.18
DFFB-202ENST00000339350 CUL4BQ13620 913 aa13.92□□□□□ -0.18
DFFB-202ENST00000339350 DDB1Q16531 1140 aa13.92□□□□□ -0.18
DFFB-202ENST00000339350 LPIN2Q92539 896 aa13.92□□□□□ -0.18
DFFB-202ENST00000339350 PLIN2Q99541 437 aa13.92□□□□□ -0.18
DFFB-202ENST00000339350 GORASP1Q9BQQ3 440 aa13.92□□□□□ -0.18
DFFB-202ENST00000339350 PPP1R3GB7ZBB8 358 aa13.91□□□□□ -0.18
DFFB-202ENST00000339350 SH2D3CQ8N5H7 860 aa13.91□□□□□ -0.18
DFFB-202ENST00000339350 CHP1Q99653 195 aa13.91□□□□□ -0.18
DFFB-202ENST00000339350 FAM167BQ9BTA0 163 aa13.91□□□□□ -0.18
DFFB-202ENST00000339350 CNNM2Q9H8M5 875 aa13.91□□□□□ -0.18
DFFB-202ENST00000339350 EBF2Q9HAK2 575 aa13.91□□□□□ -0.18
DFFB-202ENST00000339350 HDAC6Q9UBN7 1215 aa13.91□□□□□ -0.18
DFFB-202ENST00000339350 GUCA1BQ9UMX6 200 aa13.91□□□□□ -0.18
DFFB-202ENST00000339350 SHANK3Q9BYB0 1731 aa13.91□□□□□ -0.18
DFFB-202ENST00000339350 NMT2O60551 498 aa13.91□□□□□ -0.18
DFFB-202ENST00000339350 ATP6V1G2O95670 118 aa13.91□□□□□ -0.18
DFFB-202ENST00000339350 UQCRFS1P1P0C7P4 283 aa13.91□□□□□ -0.18
DFFB-202ENST00000339350 CYP7A1P22680 504 aa13.91□□□□□ -0.18
DFFB-202ENST00000339350 GUCY1A3Q02108 690 aa13.91□□□□□ -0.18
DFFB-202ENST00000339350 PPARAQ07869 468 aa13.91□□□□□ -0.18
DFFB-202ENST00000339350 TRIM28Q13263 835 aaKnown RBP13.91□□□□□ -0.18
DFFB-202ENST00000339350 KRT31Q15323 416 aa13.91□□□□□ -0.18
DFFB-202ENST00000339350 SUSD4Q5VX71 490 aa13.91□□□□□ -0.18
DFFB-202ENST00000339350 MARCH10Q8NA82 808 aaPredicted RBP13.91□□□□□ -0.18
DFFB-202ENST00000339350 ARL8AQ96BM9 186 aa13.91□□□□□ -0.18
DFFB-202ENST00000339350 PANX2Q96RD6 677 aa13.91□□□□□ -0.18
DFFB-202ENST00000339350 PIDD1Q9HB75 910 aa13.91□□□□□ -0.18
DFFB-202ENST00000339350 MTMR7Q9Y216 660 aa13.91□□□□□ -0.18
DFFB-202ENST00000339350 B4DLN1 442 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 SLC5A1P13866 664 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 ERCC5P28715 1186 aaPredicted RBP13.9□□□□□ -0.18
DFFB-202ENST00000339350 LSP1P33241 339 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 PTGDRQ13258 359 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 ITPK1Q13572 414 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 PKN1Q16512 942 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 ACBD5Q5T8D3 534 aaPredicted RBP13.9□□□□□ -0.18
DFFB-202ENST00000339350 SYCP3Q8IZU3 236 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 C17orf50Q8WW18 174 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 NACAP1Q9BZK3 213 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 DNAAF2Q9NVR5 837 aaKnown RBP13.9□□□□□ -0.18
DFFB-202ENST00000339350 CEP131Q9UPN4 1083 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 GDAQ9Y2T3 454 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 ATRNO75882 1429 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 TNS2Q63HR2 1409 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 PARP4Q9UKK3 1724 aaKnown RBP13.9□□□□□ -0.18
DFFB-202ENST00000339350 TRIM49BA6NDI0 452 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 PDE8AO60658 829 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 SRGAP2O75044 1071 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 MCM7P33993 719 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 DYNLL1P63167 89 aaKnown RBP13.9□□□□□ -0.18
DFFB-202ENST00000339350 FAM98CQ17RN3 349 aaKnown RBP13.9□□□□□ -0.18
DFFB-202ENST00000339350 KCTD16Q68DU8 428 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 ACTR5Q9H9F9 607 aaPredicted RBP13.9□□□□□ -0.18
DFFB-202ENST00000339350 UBR2Q8IWV8 1755 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 ATP4AP20648 1035 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 KRT2P35908 639 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 CRKLP46109 303 aaKnown RBP13.9□□□□□ -0.18
DFFB-202ENST00000339350 CTCFP49711 727 aaPredicted RBP13.9□□□□□ -0.18
DFFB-202ENST00000339350 USP14P54578 494 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 PPARDQ03181 441 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 PPP1R15BQ5SWA1 713 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 MTHFD1LQ6UB35 978 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 SLC51AQ86UW1 340 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 TRIML1Q8N9V2 468 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 SPATA20Q8TB22 786 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 CUL5Q93034 780 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 CAPZA3Q96KX2 299 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 EPN3Q9H201 632 aa13.9□□□□□ -0.18
DFFB-202ENST00000339350 KANK3Q6NY19 840 aa13.89□□□□□ -0.19
DFFB-202ENST00000339350 PIK3AP1Q6ZUJ8 805 aa13.89□□□□□ -0.19
DFFB-202ENST00000339350 TAX1BP1Q86VP1 789 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms