RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 MIIPQ5JXC2 388 aa16.81■□□□□ 0.28
TNFSF13-201ENST00000338784 FKBP15Q5T1M5 1219 aa16.81■□□□□ 0.28
TNFSF13-201ENST00000338784 CENPPQ6IPU0 288 aa16.81■□□□□ 0.28
TNFSF13-201ENST00000338784 ZNF662Q6ZS27 426 aa16.81■□□□□ 0.28
TNFSF13-201ENST00000338784 LARP4BQ92615 738 aaKnown RBP16.81■□□□□ 0.28
TNFSF13-201ENST00000338784 PCMTD1Q96MG8 357 aaPredicted RBP16.81■□□□□ 0.28
TNFSF13-201ENST00000338784 SLC39A2Q9NP94 309 aa16.81■□□□□ 0.28
TNFSF13-201ENST00000338784 BLOC1S4Q9NUP1 217 aa16.81■□□□□ 0.28
TNFSF13-201ENST00000338784 TRIM10Q9UDY6 481 aa16.81■□□□□ 0.28
TNFSF13-201ENST00000338784 SUGT1Q9Y2Z0 365 aa16.81■□□□□ 0.28
TNFSF13-201ENST00000338784 IGKV6D-41A0A0C4DH26 115 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 RASSF10A6NK89 507 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 SLC37A4O43826 429 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 TDP2O95551 362 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 TTLL1O95922 423 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 EIF6P56537 245 aaKnown RBP16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 HERVK_113P62684 666 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 SMC1AQ14683 1233 aaKnown RBP16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 FIGNQ5HY92 759 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 CCDC122Q5T0U0 273 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 DPP8Q6V1X1 898 aaPredicted RBP16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 UNC13DQ70J99 1090 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 TMC4Q7Z404 712 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 CCDC170Q8IYT3 715 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 EHBP1Q8NDI1 1231 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 HPS3Q969F9 1004 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 PNMA5Q96PV4 448 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 ERGIC2Q96RQ1 377 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 SEMA6BQ9H3T3 888 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 PNMA6FA0A0J9YX94 578 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 A0A1W2PQJ5 194 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 MYMKA6NI61 221 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 ERLIN1O75477 346 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 IPO7O95373 1038 aaKnown RBP16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 TFRCP02786 760 aaKnown RBP16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 KLK7P49862 253 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 MCM6Q14566 821 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 PPP1R18Q6NYC8 613 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 IQCDQ96DY2 449 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 COA1Q9GZY4 146 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 NHEJ1Q9H9Q4 299 aaPredicted RBP16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 GPCPD1Q9NPB8 672 aa16.8■□□□□ 0.28
TNFSF13-201ENST00000338784 KLRG2A4D1S0 409 aaPredicted RBP16.79■□□□□ 0.28
TNFSF13-201ENST00000338784 RIMBP2O15034 1052 aa16.79■□□□□ 0.28
TNFSF13-201ENST00000338784 KRT86O43790 486 aa16.79■□□□□ 0.28
TNFSF13-201ENST00000338784 KRT79Q5XKE5 535 aa16.79■□□□□ 0.28
TNFSF13-201ENST00000338784 KIAA1328Q86T90 577 aa16.79■□□□□ 0.28
TNFSF13-201ENST00000338784 SP8Q8IXZ3 490 aa16.79■□□□□ 0.28
TNFSF13-201ENST00000338784 CDK5RAP2Q96SN8 1893 aa16.79■□□□□ 0.28
TNFSF13-201ENST00000338784 PNKPQ96T60 521 aa16.79■□□□□ 0.28
TNFSF13-201ENST00000338784 LRRC27Q9C0I9 530 aa16.79■□□□□ 0.28
TNFSF13-201ENST00000338784 JMJD4Q9H9V9 463 aa16.79■□□□□ 0.28
TNFSF13-201ENST00000338784 RIC8AQ9NPQ8 531 aa16.79■□□□□ 0.28
TNFSF13-201ENST00000338784 SWAP70Q9UH65 585 aa16.79■□□□□ 0.28
TNFSF13-201ENST00000338784 SERPINB13Q9UIV8 391 aa16.79■□□□□ 0.28
TNFSF13-201ENST00000338784 EIF3CLB5ME19 914 aaKnown RBP16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 F8W031 263 aaPredicted RBP16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 PPEF1O14829 653 aaPredicted RBP16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 EDIL3O43854 480 aa16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 TUBBP07437 444 aa16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 HMGB2P26583 209 aaKnown RBP16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 CDK17Q00537 523 aa16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 DDR1Q08345 913 aa16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 ZNF543Q08ER8 600 aa16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 PPP4R3AQ6IN85 833 aa16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 DYMQ7RTS9 669 aa16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 TRAPPC11Q7Z392 1133 aa16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 ADGRF4Q8IZF3 695 aa16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 SNX29Q8TEQ0 813 aa16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 RAD54LQ92698 747 aa16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 EIF3CQ99613 913 aaKnown RBP16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 DDX4Q9NQI0 724 aaKnown RBP16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 POTEMA6NI47 508 aa16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 POLRMTO00411 1230 aaKnown RBP16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 MAP2K7O14733 419 aa16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 POLR3GO15318 223 aaPredicted RBP16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 FGFR1OPO95684 399 aaKnown RBP16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 RHOXF2BP0C7M4 288 aa16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 OAS2P29728 719 aaKnown RBP16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 HOXA7P31268 230 aaPredicted RBP16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 TNNI2P48788 182 aa16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 BEND6Q5SZJ8 279 aaPredicted RBP16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 CLEC10AQ8IUN9 316 aa16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 GUF1Q8N442 669 aaKnown RBP16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 JAKMIP2Q96AA8 810 aa16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 RHOXF2Q9BQY4 288 aa16.78■□□□□ 0.28
TNFSF13-201ENST00000338784 MYO3BQ8WXR4 1341 aa16.77■□□□□ 0.28
TNFSF13-201ENST00000338784 VWA3BQ502W6 1294 aa16.77■□□□□ 0.28
TNFSF13-201ENST00000338784 NCAPH2Q6IBW4 605 aa16.77■□□□□ 0.28
TNFSF13-201ENST00000338784 CUL5Q93034 780 aa16.77■□□□□ 0.28
TNFSF13-201ENST00000338784 USP40Q9NVE5 1235 aa16.77■□□□□ 0.28
TNFSF13-201ENST00000338784 MYH8P13535 1937 aa16.77■□□□□ 0.28
TNFSF13-201ENST00000338784 ABCB11O95342 1321 aa16.77■□□□□ 0.27
TNFSF13-201ENST00000338784 ENC1O14682 589 aa16.77■□□□□ 0.27
TNFSF13-201ENST00000338784 MRPL12P52815 198 aaKnown RBP16.77■□□□□ 0.27
TNFSF13-201ENST00000338784 LRRC63Q05C16 580 aa16.77■□□□□ 0.27
TNFSF13-201ENST00000338784 GPATCH4Q5T3I0 446 aaKnown RBP16.77■□□□□ 0.27
TNFSF13-201ENST00000338784 HDXQ7Z353 690 aa16.77■□□□□ 0.27
TNFSF13-201ENST00000338784 NDST4Q9H3R1 872 aa16.77■□□□□ 0.27
TNFSF13-201ENST00000338784 TFR2Q9UP52 801 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms