RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 LTBP3Q9NS15 1303 aa4.63□□□□□ -1.67
XRCC4-202ENST00000338635 MROH6A6NGR9 719 aa4.62□□□□□ -1.67
XRCC4-202ENST00000338635 NTRK1P04629 796 aa4.62□□□□□ -1.67
XRCC4-202ENST00000338635 RPL13P26373 211 aaKnown RBP4.62□□□□□ -1.67
XRCC4-202ENST00000338635 ZNF326Q5BKZ1 582 aaKnown RBP4.62□□□□□ -1.67
XRCC4-202ENST00000338635 WWC2Q6AWC2 1192 aa4.62□□□□□ -1.67
XRCC4-202ENST00000338635 MCTP2Q6DN12 878 aa4.62□□□□□ -1.67
XRCC4-202ENST00000338635 ADAT2Q7Z6V5 191 aaKnown RBP4.62□□□□□ -1.67
XRCC4-202ENST00000338635 FAM124AQ86V42 546 aa4.62□□□□□ -1.67
XRCC4-202ENST00000338635 DVL3Q92997 716 aaPredicted RBP4.62□□□□□ -1.67
XRCC4-202ENST00000338635 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.62□□□□□ -1.67
XRCC4-202ENST00000338635 ST6GALNAC2Q9UJ37 374 aa4.62□□□□□ -1.67
XRCC4-202ENST00000338635 PPT2Q9UMR5 302 aa4.62□□□□□ -1.67
XRCC4-202ENST00000338635 NPHP3-ACAD11A0A0J9YXS1 232 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 FUCA1P04066 466 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 PAMP19021 973 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 THBS2P35442 1172 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 GNPTABQ3T906 1256 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 FAM26FQ5R3K3 315 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 HEATR6Q6AI08 1181 aaKnown RBP4.61□□□□□ -1.67
XRCC4-202ENST00000338635 BORAQ6PGQ7 559 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 GLB1LQ6UWU2 654 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 LIMS2Q7Z4I7 341 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 STK32CQ86UX6 486 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 KYQ8NBH2 561 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 TMEM87AQ8NBN3 555 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 HAUS7Q99871 368 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 SSBP3Q9BWW4 388 aaPredicted RBP4.61□□□□□ -1.67
XRCC4-202ENST00000338635 BCL2L13Q9BXK5 485 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 PCDH18Q9HCL0 1135 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 BACE2Q9Y5Z0 518 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 C7orf72A4D263 438 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 NPHS1O60500 1241 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 C6P13671 934 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 AMPD2Q01433 879 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 CCDC27Q2M243 656 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 CD300LDQ6UXZ3 194 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 SPRED1Q7Z699 444 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 FAM26EQ8N5C1 309 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 TTLL6Q8N841 843 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 TXNDC5Q8NBS9 432 aaKnown RBP4.61□□□□□ -1.67
XRCC4-202ENST00000338635 SH3RF3Q8TEJ3 882 aaPredicted RBP4.61□□□□□ -1.67
XRCC4-202ENST00000338635 FGD4Q96M96 766 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 KLHL25Q9H0H3 589 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 GBP3Q9H0R5 595 aa4.61□□□□□ -1.67
XRCC4-202ENST00000338635 TRBV23OR9-2A0A075B6M9 112 aa4.6□□□□□ -1.67
XRCC4-202ENST00000338635 DDX3XO00571 662 aaKnown RBP eCLIP4.6□□□□□ -1.67
XRCC4-202ENST00000338635 PPM1BO75688 479 aa4.6□□□□□ -1.67
XRCC4-202ENST00000338635 SLPIP03973 132 aa4.6□□□□□ -1.67
XRCC4-202ENST00000338635 GDF5P43026 501 aa4.6□□□□□ -1.67
XRCC4-202ENST00000338635 ETV3LQ6ZN32 361 aa4.6□□□□□ -1.67
XRCC4-202ENST00000338635 PLEKHO2Q8TD55 490 aa4.6□□□□□ -1.67
XRCC4-202ENST00000338635 GIPC2Q8TF65 315 aa4.6□□□□□ -1.67
XRCC4-202ENST00000338635 BCL11AQ9H165 835 aa4.6□□□□□ -1.67
XRCC4-202ENST00000338635 TACR2P21452 398 aa4.59□□□□□ -1.67
XRCC4-202ENST00000338635 LDLRAD1Q5T700 205 aa4.59□□□□□ -1.67
XRCC4-202ENST00000338635 C9orf131Q5VYM1 1079 aa4.59□□□□□ -1.67
XRCC4-202ENST00000338635 ARHGEF39Q8N4T4 335 aa4.59□□□□□ -1.67
XRCC4-202ENST00000338635 KISS1RQ969F8 398 aaPredicted RBP4.59□□□□□ -1.67
XRCC4-202ENST00000338635 CGGBP1Q9UFW8 167 aaPredicted RBP4.59□□□□□ -1.67
XRCC4-202ENST00000338635 PCDHB10Q9UN67 800 aa4.59□□□□□ -1.67
XRCC4-202ENST00000338635 EPHX1P07099 455 aa4.58□□□□□ -1.68
XRCC4-202ENST00000338635 PDIA4P13667 645 aaKnown RBP4.58□□□□□ -1.68
XRCC4-202ENST00000338635 SLC7A5Q01650 507 aa4.58□□□□□ -1.68
XRCC4-202ENST00000338635 PRR31Q5SQ13 230 aa4.58□□□□□ -1.68
XRCC4-202ENST00000338635 DCP2Q8IU60 420 aaKnown RBP4.58□□□□□ -1.68
XRCC4-202ENST00000338635 Q8N1X5 172 aa4.58□□□□□ -1.68
XRCC4-202ENST00000338635 RCC1LQ96I51 464 aaKnown RBP4.58□□□□□ -1.68
XRCC4-202ENST00000338635 LCORQ96JN0 433 aaPredicted RBP4.58□□□□□ -1.68
XRCC4-202ENST00000338635 CRBNQ96SW2 442 aa4.58□□□□□ -1.68
XRCC4-202ENST00000338635 TSC22D4Q9Y3Q8 395 aa4.58□□□□□ -1.68
XRCC4-202ENST00000338635 SLC12A7Q9Y666 1083 aa4.58□□□□□ -1.68
XRCC4-202ENST00000338635 SGSM2O43147 1006 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 TGM1P22735 817 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 ZNF76P36508 570 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 GRB10Q13322 594 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 ZC3H18Q86VM9 953 aaKnown RBP4.57□□□□□ -1.68
XRCC4-202ENST00000338635 MIB1Q86YT6 1006 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 DPF3Q92784 378 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 AP5M1Q9H0R1 490 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 PHAXQ9H814 394 aaKnown RBP4.57□□□□□ -1.68
XRCC4-202ENST00000338635 MARCH2Q9P0N8 246 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 CLEC1BQ9P126 229 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 SUGT1Q9Y2Z0 365 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 LAMTOR5O43504 91 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 PLS3P13797 630 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 ACVRL1P37023 503 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 ITGA1P56199 1179 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 RBM10P98175 930 aaKnown RBP4.57□□□□□ -1.68
XRCC4-202ENST00000338635 CDSNQ15517 529 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 SURF1Q15526 300 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 ZNF394Q53GI3 561 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 MBLAC2Q68D91 279 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 CCDC81Q6ZN84 652 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 ZFPM1Q8IX07 1006 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 GPRC5CQ9NQ84 441 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 PPP4R1LQ9P1A2 415 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 PCDHGB7Q9Y5F8 929 aa4.57□□□□□ -1.68
XRCC4-202ENST00000338635 A0A1W2PQH9 124 aa4.56□□□□□ -1.68
XRCC4-202ENST00000338635 NPEPPSL1A6NEC2 478 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms