RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 ZNF76P36508 570 aa16.63■□□□□ 0.25
CBX3-201ENST00000337620 MKRN3Q13064 507 aaKnown RBP16.63■□□□□ 0.25
CBX3-201ENST00000337620 NSMFQ6X4W1 530 aa16.63■□□□□ 0.25
CBX3-201ENST00000337620 CNNM3Q8NE01 707 aa16.63■□□□□ 0.25
CBX3-201ENST00000337620 TIGD1Q96MW7 591 aa16.63■□□□□ 0.25
CBX3-201ENST00000337620 TEX13BQ9BXU2 312 aa16.63■□□□□ 0.25
CBX3-201ENST00000337620 TSPY26PQ9H489 355 aa16.63■□□□□ 0.25
CBX3-201ENST00000337620 CYP3A7-CYP3A51PA0A087WV96 503 aa16.63■□□□□ 0.25
CBX3-201ENST00000337620 ITGBL1O95965 494 aaPredicted RBP16.63■□□□□ 0.25
CBX3-201ENST00000337620 CYP3A7P24462 503 aa16.63■□□□□ 0.25
CBX3-201ENST00000337620 STAT3P40763 770 aa16.63■□□□□ 0.25
CBX3-201ENST00000337620 MOGSQ13724 837 aa16.63■□□□□ 0.25
CBX3-201ENST00000337620 CST9Q5W186 159 aa16.63■□□□□ 0.25
CBX3-201ENST00000337620 ERCC4Q92889 916 aaPredicted RBP16.63■□□□□ 0.25
CBX3-201ENST00000337620 UIMC1Q96RL1 719 aa16.63■□□□□ 0.25
CBX3-201ENST00000337620 ASCC2Q9H1I8 757 aaPredicted RBP16.63■□□□□ 0.25
CBX3-201ENST00000337620 LOC285556D6RIA3 1793 aa16.62■□□□□ 0.25
CBX3-201ENST00000337620 ATP2A1O14983 1001 aa16.62■□□□□ 0.25
CBX3-201ENST00000337620 PRR16Q569H4 304 aa16.62■□□□□ 0.25
CBX3-201ENST00000337620 KRBA2Q6ZNG9 492 aa16.62■□□□□ 0.25
CBX3-201ENST00000337620 RBM43Q6ZSC3 357 aaKnown RBP16.62■□□□□ 0.25
CBX3-201ENST00000337620 DHX58Q96C10 678 aa16.62■□□□□ 0.25
CBX3-201ENST00000337620 SERTAD1Q9UHV2 236 aa16.62■□□□□ 0.25
CBX3-201ENST00000337620 A0A087X0B3 334 aa16.61■□□□□ 0.25
CBX3-201ENST00000337620 FSD2A1L4K1 749 aa16.61■□□□□ 0.25
CBX3-201ENST00000337620 PP2D1A8MPX8 630 aa16.61■□□□□ 0.25
CBX3-201ENST00000337620 PEX10O60683 326 aa16.61■□□□□ 0.25
CBX3-201ENST00000337620 TXLNAP40222 546 aa16.61■□□□□ 0.25
CBX3-201ENST00000337620 RPS6P62753 249 aaKnown RBP16.61■□□□□ 0.25
CBX3-201ENST00000337620 PABPC4Q13310 644 aaKnown RBP eCLIP16.61■□□□□ 0.255e-6■□□□□ 10.7
CBX3-201ENST00000337620 TMEM266Q2M3C6 531 aa16.61■□□□□ 0.25
CBX3-201ENST00000337620 MOXD1Q6UVY6 613 aa16.61■□□□□ 0.25
CBX3-201ENST00000337620 LBX2Q6XYB7 198 aa16.61■□□□□ 0.25
CBX3-201ENST00000337620 RNF207Q6ZRF8 634 aa16.61■□□□□ 0.25
CBX3-201ENST00000337620 GJA10Q969M2 543 aa16.61■□□□□ 0.25
CBX3-201ENST00000337620 COL20A1Q9P218 1284 aa16.61■□□□□ 0.25
CBX3-201ENST00000337620 FAM86B1E9PN63 330 aa16.61■□□□□ 0.25
CBX3-201ENST00000337620 CYP3A4P08684 503 aa16.61■□□□□ 0.25
CBX3-201ENST00000337620 FAM86B2P0C5J1 330 aa16.61■□□□□ 0.25
CBX3-201ENST00000337620 UBA7P41226 1012 aa16.61■□□□□ 0.25
CBX3-201ENST00000337620 HERVK_113P62684 666 aa16.61■□□□□ 0.25
CBX3-201ENST00000337620 GPAT2Q6NUI2 795 aa16.61■□□□□ 0.25
CBX3-201ENST00000337620 SASS6Q6UVJ0 657 aa16.61■□□□□ 0.25
CBX3-201ENST00000337620 SYTL5Q8TDW5 730 aaPredicted RBP16.61■□□□□ 0.25
CBX3-201ENST00000337620 HAS1Q92839 578 aa16.61■□□□□ 0.25
CBX3-201ENST00000337620 MAP3K20Q9NYL2 800 aaKnown RBP16.61■□□□□ 0.25
CBX3-201ENST00000337620 CCDC192P0DO97 292 aa16.6■□□□□ 0.25
CBX3-201ENST00000337620 OSBPP22059 807 aa16.6■□□□□ 0.25
CBX3-201ENST00000337620 CIITAP33076 1130 aa16.6■□□□□ 0.25
CBX3-201ENST00000337620 GHRHRQ02643 423 aa16.6■□□□□ 0.25
CBX3-201ENST00000337620 ZRSR1Q15695 479 aaKnown RBP16.6■□□□□ 0.25
CBX3-201ENST00000337620 Q4G0T1 1027 aa16.6■□□□□ 0.25
CBX3-201ENST00000337620 POTEEQ6S8J3 1075 aa16.6■□□□□ 0.25
CBX3-201ENST00000337620 SLC30A10Q6XR72 485 aa16.6■□□□□ 0.25
CBX3-201ENST00000337620 SAMD3Q8N6K7 520 aa16.6■□□□□ 0.25
CBX3-201ENST00000337620 MB21D1Q8N884 522 aa16.6■□□□□ 0.25
CBX3-201ENST00000337620 RASSF8Q8NHQ8 419 aa16.6■□□□□ 0.25
CBX3-201ENST00000337620 CYP2W1Q8TAV3 490 aa16.6■□□□□ 0.25
CBX3-201ENST00000337620 AK8Q96MA6 479 aa16.6■□□□□ 0.25
CBX3-201ENST00000337620 MBOAT7Q96N66 472 aa16.6■□□□□ 0.25
CBX3-201ENST00000337620 PAGR1Q9BTK6 254 aa16.6■□□□□ 0.25
CBX3-201ENST00000337620 TTC12Q9H892 705 aaPredicted RBP16.6■□□□□ 0.25
CBX3-201ENST00000337620 BTBD7Q9P203 1132 aa16.6■□□□□ 0.25
CBX3-201ENST00000337620 BAATQ14032 418 aaPredicted RBP16.6■□□□□ 0.25
CBX3-201ENST00000337620 TKFCQ3LXA3 575 aa16.6■□□□□ 0.25
CBX3-201ENST00000337620 ZFP91Q96JP5 570 aaPredicted RBP16.6■□□□□ 0.25
CBX3-201ENST00000337620 FUCA2Q9BTY2 467 aa16.6■□□□□ 0.25
CBX3-201ENST00000337620 ACAD9Q9H845 621 aa16.6■□□□□ 0.25
CBX3-201ENST00000337620 CETPP11597 493 aa16.59■□□□□ 0.25
CBX3-201ENST00000337620 FXR2P51116 673 aaKnown RBP eCLIP16.59■□□□□ 0.254e-11■□□□□ 8.2
CBX3-201ENST00000337620 GTF2A2P52657 109 aa16.59■□□□□ 0.25
CBX3-201ENST00000337620 HUNKP57058 714 aa16.59■□□□□ 0.25
CBX3-201ENST00000337620 TYRO3Q06418 890 aa16.59■□□□□ 0.25
CBX3-201ENST00000337620 KARSQ15046 597 aaKnown RBP16.59■□□□□ 0.25
CBX3-201ENST00000337620 IGSF22Q8N9C0 903 aa16.59■□□□□ 0.25
CBX3-201ENST00000337620 TAAR1Q96RJ0 339 aa16.59■□□□□ 0.25
CBX3-201ENST00000337620 RAB34Q9BZG1 259 aa16.59■□□□□ 0.25
CBX3-201ENST00000337620 KCNMB3Q9NPA1 279 aa16.59■□□□□ 0.25
CBX3-201ENST00000337620 KIAA1468Q9P260 1216 aa16.59■□□□□ 0.25
CBX3-201ENST00000337620 LRWD1Q9UFC0 647 aa16.59■□□□□ 0.25
CBX3-201ENST00000337620 PCDHA12Q9UN75 941 aa16.59■□□□□ 0.25
CBX3-201ENST00000337620 FOXN1O15353 648 aa16.58■□□□□ 0.25
CBX3-201ENST00000337620 ACTN4O43707 911 aaKnown RBP16.58■□□□□ 0.25
CBX3-201ENST00000337620 PNOCQ13519 176 aa16.58■□□□□ 0.25
CBX3-201ENST00000337620 CEP57L1Q8IYX8 460 aa16.58■□□□□ 0.25
CBX3-201ENST00000337620 IQUBQ8NA54 791 aa16.58■□□□□ 0.25
CBX3-201ENST00000337620 LENG9Q96B70 501 aa16.58■□□□□ 0.25
CBX3-201ENST00000337620 RBSNQ9H1K0 784 aa16.58■□□□□ 0.25
CBX3-201ENST00000337620 GPBP1L1Q9HC44 474 aaPredicted RBP16.58■□□□□ 0.25
CBX3-201ENST00000337620 HOOK1Q9UJC3 728 aaKnown RBP16.58■□□□□ 0.25
CBX3-201ENST00000337620 CCL15-CCL14A0A0B4J2E2 113 aa16.58■□□□□ 0.24
CBX3-201ENST00000337620 PDIA5Q14554 519 aa16.58■□□□□ 0.24
CBX3-201ENST00000337620 CCL15Q16663 113 aa16.58■□□□□ 0.24
CBX3-201ENST00000337620 CABP7Q86V35 215 aa16.58■□□□□ 0.24
CBX3-201ENST00000337620 SLFN12Q8IYM2 578 aa16.58■□□□□ 0.24
CBX3-201ENST00000337620 RNF214Q8ND24 703 aa16.58■□□□□ 0.24
CBX3-201ENST00000337620 MS4A4AQ96JQ5 239 aa16.58■□□□□ 0.24
CBX3-201ENST00000337620 PURBQ96QR8 312 aaKnown RBP16.58■□□□□ 0.24
CBX3-201ENST00000337620 PLIN2Q99541 437 aa16.58■□□□□ 0.24
CBX3-201ENST00000337620 PYM1Q9BRP8 204 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms