RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 A0A1W2PPC1 479 aa13.14□□□□□ -0.31
MRPL55-203ENST00000336520 DCDC2CA8MYV0 355 aa13.14□□□□□ -0.31
MRPL55-203ENST00000336520 CTAGE5O15320 804 aa13.14□□□□□ -0.31
MRPL55-203ENST00000336520 EIF2AK2P19525 551 aaKnown RBP13.14□□□□□ -0.31
MRPL55-203ENST00000336520 HOXA13P31271 388 aaPredicted RBP13.14□□□□□ -0.31
MRPL55-203ENST00000336520 HSD17B4P51659 736 aa13.14□□□□□ -0.31
MRPL55-203ENST00000336520 FGD1P98174 961 aa13.14□□□□□ -0.31
MRPL55-203ENST00000336520 ADCK5Q3MIX3 580 aa13.14□□□□□ -0.31
MRPL55-203ENST00000336520 TSGA10IPQ3SY00 556 aa13.14□□□□□ -0.31
MRPL55-203ENST00000336520 TMEM63BQ5T3F8 832 aa13.14□□□□□ -0.31
MRPL55-203ENST00000336520 DHX32Q7L7V1 743 aaKnown RBP13.14□□□□□ -0.31
MRPL55-203ENST00000336520 MICU3Q86XE3 530 aa13.14□□□□□ -0.31
MRPL55-203ENST00000336520 TCEANC2Q96MN5 208 aa13.14□□□□□ -0.31
MRPL55-203ENST00000336520 PDLIM7Q9NR12 457 aa13.14□□□□□ -0.31
MRPL55-203ENST00000336520 Q9Y3F1 56 aa13.14□□□□□ -0.31
MRPL55-203ENST00000336520 A0A0U1RQG5 324 aaPredicted RBP13.13□□□□□ -0.31
MRPL55-203ENST00000336520 RBM47A0AV96 593 aaKnown RBP13.13□□□□□ -0.31
MRPL55-203ENST00000336520 GCOM1H8Y6P7 765 aaPredicted RBP13.13□□□□□ -0.31
MRPL55-203ENST00000336520 OPLAHO14841 1288 aa13.13□□□□□ -0.31
MRPL55-203ENST00000336520 PLEKHA8P1O95397 391 aa13.13□□□□□ -0.31
MRPL55-203ENST00000336520 HMGB1P09429 215 aaKnown RBP13.13□□□□□ -0.31
MRPL55-203ENST00000336520 CLTBP09497 229 aa13.13□□□□□ -0.31
MRPL55-203ENST00000336520 POLR2MP0CAP2 368 aa13.13□□□□□ -0.31
MRPL55-203ENST00000336520 TXNP10599 105 aaKnown RBP13.13□□□□□ -0.31
MRPL55-203ENST00000336520 BMP8BP34820 402 aa13.13□□□□□ -0.31
MRPL55-203ENST00000336520 FXR1P51114 621 aaKnown RBP eCLIP13.13□□□□□ -0.31
MRPL55-203ENST00000336520 NKX3-2P78367 333 aa13.13□□□□□ -0.31
MRPL55-203ENST00000336520 STXBP2Q15833 593 aa13.13□□□□□ -0.31
MRPL55-203ENST00000336520 CXCL17Q6UXB2 119 aa13.13□□□□□ -0.31
MRPL55-203ENST00000336520 SEPT14Q6ZU15 432 aa13.13□□□□□ -0.31
MRPL55-203ENST00000336520 SGMS1Q86VZ5 419 aa13.13□□□□□ -0.31
MRPL55-203ENST00000336520 SAMD3Q8N6K7 520 aa13.13□□□□□ -0.31
MRPL55-203ENST00000336520 OR6J1Q8NGC5 347 aa13.13□□□□□ -0.31
MRPL55-203ENST00000336520 IWS1Q96ST2 819 aa13.13□□□□□ -0.31
MRPL55-203ENST00000336520 PXMP2Q9NR77 195 aa13.13□□□□□ -0.31
MRPL55-203ENST00000336520 MAP3K20Q9NYL2 800 aaKnown RBP13.13□□□□□ -0.31
MRPL55-203ENST00000336520 MROH7Q68CQ1 1323 aa13.13□□□□□ -0.31
MRPL55-203ENST00000336520 NKRFO15226 690 aaKnown RBP eCLIP13.12□□□□□ -0.31
MRPL55-203ENST00000336520 CABYRO75952 493 aa13.12□□□□□ -0.31
MRPL55-203ENST00000336520 SLC34A2O95436 690 aa13.12□□□□□ -0.31
MRPL55-203ENST00000336520 SMARCA1P28370 1054 aa13.12□□□□□ -0.31
MRPL55-203ENST00000336520 HSPA4P34932 840 aa13.12□□□□□ -0.31
MRPL55-203ENST00000336520 CPT1AP50416 773 aa13.12□□□□□ -0.31
MRPL55-203ENST00000336520 EXOSC10Q01780 885 aaKnown RBP13.12□□□□□ -0.31
MRPL55-203ENST00000336520 GHRHRQ02643 423 aa13.12□□□□□ -0.31
MRPL55-203ENST00000336520 TTLL4Q14679 1199 aa13.12□□□□□ -0.31
MRPL55-203ENST00000336520 BRDTQ58F21 947 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-203ENST00000336520 APOA5Q6Q788 366 aa13.12□□□□□ -0.31
MRPL55-203ENST00000336520 ANKRD33Q7Z3H0 272 aa13.12□□□□□ -0.31
MRPL55-203ENST00000336520 SH3RF1Q7Z6J0 888 aa13.12□□□□□ -0.31
MRPL55-203ENST00000336520 FCHSD1Q86WN1 690 aa13.12□□□□□ -0.31
MRPL55-203ENST00000336520 CMTR1Q8N1G2 835 aaKnown RBP13.12□□□□□ -0.31
MRPL55-203ENST00000336520 CCDC82Q8N4S0 544 aa13.12□□□□□ -0.31
MRPL55-203ENST00000336520 SRBD1Q8N5C6 995 aaKnown RBP13.12□□□□□ -0.31
MRPL55-203ENST00000336520 FANCBQ8NB91 859 aa13.12□□□□□ -0.31
MRPL55-203ENST00000336520 JAKMIP1Q96N16 626 aaKnown RBP13.12□□□□□ -0.31
MRPL55-203ENST00000336520 TOX2Q96NM4 488 aa13.12□□□□□ -0.31
MRPL55-203ENST00000336520 TMEM39AQ9NV64 488 aa13.12□□□□□ -0.31
MRPL55-203ENST00000336520 NAP1L2Q9ULW6 460 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-203ENST00000336520 RANBP2P49792 3224 aaKnown RBP13.12□□□□□ -0.31
MRPL55-203ENST00000336520 TRIM43BA6NCK2 446 aa13.11□□□□□ -0.31
MRPL55-203ENST00000336520 ARVCFO00192 962 aa13.11□□□□□ -0.31
MRPL55-203ENST00000336520 ZBTB43O43298 467 aa13.11□□□□□ -0.31
MRPL55-203ENST00000336520 EIF3JO75822 258 aaKnown RBP13.11□□□□□ -0.31
MRPL55-203ENST00000336520 NR3C2P08235 984 aa13.11□□□□□ -0.31
MRPL55-203ENST00000336520 MYL3P08590 195 aa13.11□□□□□ -0.31
MRPL55-203ENST00000336520 MYCLP12524 364 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-203ENST00000336520 RAG1P15918 1043 aa13.11□□□□□ -0.31
MRPL55-203ENST00000336520 TMTC3Q6ZXV5 915 aa13.11□□□□□ -0.31
MRPL55-203ENST00000336520 TDHQ8IZJ6 230 aa13.11□□□□□ -0.31
MRPL55-203ENST00000336520 CUL5Q93034 780 aa13.11□□□□□ -0.31
MRPL55-203ENST00000336520 TRIM43Q96BQ3 446 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-203ENST00000336520 POLR3EQ9NVU0 708 aa13.11□□□□□ -0.31
MRPL55-203ENST00000336520 SNX14Q9Y5W7 946 aa13.11□□□□□ -0.31
MRPL55-203ENST00000336520 KLF18A0A0U1RQI7 1052 aa13.1□□□□□ -0.31
MRPL55-203ENST00000336520 hCG_1642624A0A1W2PR95 340 aa13.1□□□□□ -0.31
MRPL55-203ENST00000336520 GOLGA8AA7E2F4 631 aa13.1□□□□□ -0.31
MRPL55-203ENST00000336520 GOLGA8BA8MQT2 603 aa13.1□□□□□ -0.31
MRPL55-203ENST00000336520 KIAA0355O15063 1070 aa13.1□□□□□ -0.31
MRPL55-203ENST00000336520 TLR3O15455 904 aaKnown RBP13.1□□□□□ -0.31
MRPL55-203ENST00000336520 ARIH2O95376 493 aa13.1□□□□□ -0.31
MRPL55-203ENST00000336520 CPA1P15085 419 aa13.1□□□□□ -0.31
MRPL55-203ENST00000336520 ITGA7Q13683 1181 aa13.1□□□□□ -0.31
MRPL55-203ENST00000336520 RTN1Q16799 776 aa13.1□□□□□ -0.31
MRPL55-203ENST00000336520 BLOC1S2Q6QNY1 142 aa13.1□□□□□ -0.31
MRPL55-203ENST00000336520 COPS5Q92905 334 aa13.1□□□□□ -0.31
MRPL55-203ENST00000336520 BADQ92934 168 aa13.1□□□□□ -0.31
MRPL55-203ENST00000336520 KCNB2Q92953 911 aa13.1□□□□□ -0.31
MRPL55-203ENST00000336520 PDCD2LQ9BRP1 358 aa13.1□□□□□ -0.31
MRPL55-203ENST00000336520 RBM28Q9NW13 759 aaKnown RBP13.1□□□□□ -0.31
MRPL55-203ENST00000336520 BRPF3Q9ULD4 1205 aa13.1□□□□□ -0.31
MRPL55-203ENST00000336520 MRVI1Q9Y6F6 885 aa13.1□□□□□ -0.31
MRPL55-203ENST00000336520 LTBP2Q14767 1821 aa13.09□□□□□ -0.31
MRPL55-203ENST00000336520 GH1P01241 217 aa13.09□□□□□ -0.31
MRPL55-203ENST00000336520 PSMA5P28066 241 aa13.09□□□□□ -0.31
MRPL55-203ENST00000336520 CCND2P30279 289 aa13.09□□□□□ -0.31
MRPL55-203ENST00000336520 CDK7P50613 346 aa13.09□□□□□ -0.31
MRPL55-203ENST00000336520 PSMC6P62333 389 aa13.09□□□□□ -0.31
MRPL55-203ENST00000336520 FAAP100Q0VG06 881 aa13.09□□□□□ -0.31
MRPL55-203ENST00000336520 PGM5Q15124 567 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms