RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 ZRANB1Q9UGI0 708 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 ZNF229Q9UJW7 825 aa6.58□□□□□ -1.36
CDC42BPA-201ENST00000334218 PRR23D1E9PI22 279 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 PRR23D2P0DMB1 279 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 PYGBP11216 843 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 EXOSC9Q06265 439 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 TMED2Q15363 201 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 TTC39AQ5SRH9 613 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 SUN5Q8TC36 379 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 UQCC2Q9BRT2 126 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 WASLO00401 505 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 KLC1Q07866 573 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 DLG1Q12959 904 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 TAF5Q15542 800 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 SESTD1Q86VW0 696 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 HDAC6Q9UBN7 1215 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 THRAP3Q9Y2W1 955 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 MAGEA6P43360 314 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 YIPF3Q9GZM5 350 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 DDX19AQ9NUU7 478 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 R3HDM2Q9Y2K5 976 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 MAP3K5Q99683 1374 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 MYBBP1AQ9BQG0 1328 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 FOSL2P15408 326 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 PSMA3P25788 255 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 GRSF1Q12849 480 aaKnown RBP eCLIP6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 HADHQ16836 314 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 LGSNQ5TDP6 509 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 AACSQ86V21 672 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 CABLES1Q8TDN4 633 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 SPASTQ9UBP0 616 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 GPN3Q9UHW5 284 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 PCDHGA3Q9Y5H0 932 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 SNX5Q9Y5X3 404 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 KPNA1P52294 538 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 S100A12P80511 92 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 RUNX1T1Q06455 604 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 KRT78Q8N1N4 520 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 NOB1Q9ULX3 412 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 PITPNM2Q9BZ72 1349 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 TRIM75PA6NK02 468 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 SYNCRIPO60506 623 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 VARSP26640 1264 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 KRT27Q7Z3Y8 459 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 NELFBQ8WX92 580 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 TMX1Q9H3N1 280 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 METTL8Q9H825 291 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 USP40Q9NVE5 1235 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 CIDEBQ9UHD4 219 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 EFR3BQ9Y2G0 817 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 PLCH2O75038 1416 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 FAM83GA6ND36 823 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 SNTNA6NMZ2 147 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 EVPLLA8MZ36 301 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 TTC4O95801 387 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 POTEIP0CG38 1075 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 TBL3Q12788 808 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 TMEM259Q4ZIN3 620 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 ARMCX4Q5H9R4 360 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 C1orf94Q6P1W5 598 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 CDHR1Q96JP9 859 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 RBBP8Q99708 897 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 KATNAL1Q9BW62 490 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 UBN1Q9NPG3 1134 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 SUCLA2Q9P2R7 463 aaPredicted RBP6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 SYNJ2BP-COX16A0A087WUM0 186 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 ATP2C2O75185 946 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 DDIT3P35638 169 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 ABL2P42684 1182 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 TRIM71Q2Q1W2 868 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 LRIF1Q5T3J3 769 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 ARMC3Q5W041 872 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 RCSD1Q6JBY9 416 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 NLRP13Q86W25 1043 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 EPRSP07814 1512 aaKnown RBP6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 ABCC2Q92887 1545 aa6.57□□□□□ -1.36
CDC42BPA-201ENST00000334218 FRAT2O75474 233 aaPredicted RBP6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 GOLGA8HP0CJ92 632 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 CD53P19397 219 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 TMEM266Q2M3C6 531 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 Q4G0T1 1027 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 CASC4Q6P4E1 433 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 GAL3ST1Q99999 423 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 SPINK5Q9NQ38 1064 aaPredicted RBP6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 FBXO28Q9NVF7 368 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 SMCO3A2RU48 225 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 NFE2L1Q14494 772 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 LVRNQ6Q4G3 990 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 PDZD8Q8NEN9 1154 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 SCG3Q8WXD2 468 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 RMDN1Q96DB5 314 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 FGD6Q6ZV73 1430 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 NCOA2Q15596 1464 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 LRRC9Q6ZRR7 1453 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 B4GALNT2Q8NHY0 566 aa6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 NUTM2BA6NNL0 878 aaPredicted RBP6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 NUTM2EB1AL46 878 aaPredicted RBP6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 TRAP1Q12931 704 aaKnown RBP6.56□□□□□ -1.36
CDC42BPA-201ENST00000334218 TAB1Q15750 504 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms