RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 TMEM266Q2M3C6 531 aa21.15■□□□□ 0.98
RFTN1-201ENST00000334133 PARD6BQ9BYG5 372 aa21.15■□□□□ 0.98
RFTN1-201ENST00000334133 DDX25Q9UHL0 483 aaKnown RBP21.15■□□□□ 0.98
RFTN1-201ENST00000334133 GDF11O95390 407 aa21.15■□□□□ 0.98
RFTN1-201ENST00000334133 SMARCA1P28370 1054 aa21.15■□□□□ 0.98
RFTN1-201ENST00000334133 CUEDC2Q9H467 287 aa21.15■□□□□ 0.98
RFTN1-201ENST00000334133 PSTPIP2Q9H939 334 aa21.15■□□□□ 0.98
RFTN1-201ENST00000334133 MYL1P05976 194 aa21.14■□□□□ 0.97
RFTN1-201ENST00000334133 PNMA6AP0CW24 399 aaPredicted RBP21.14■□□□□ 0.97
RFTN1-201ENST00000334133 NPR1P16066 1061 aa21.14■□□□□ 0.97
RFTN1-201ENST00000334133 AMPD3Q01432 767 aa21.14■□□□□ 0.97
RFTN1-201ENST00000334133 CTAGE9A4FU28 777 aa21.14■□□□□ 0.97
RFTN1-201ENST00000334133 EEF2P13639 858 aaKnown RBP21.14■□□□□ 0.97
RFTN1-201ENST00000334133 FECHP22830 423 aa21.13■□□□□ 0.97
RFTN1-201ENST00000334133 DNM2P50570 870 aa21.13■□□□□ 0.97
RFTN1-201ENST00000334133 CYP27A1Q02318 531 aa21.13■□□□□ 0.97
RFTN1-201ENST00000334133 TRIM14Q14142 442 aa21.13■□□□□ 0.97
RFTN1-201ENST00000334133 KRT79Q5XKE5 535 aa21.13■□□□□ 0.97
RFTN1-201ENST00000334133 HAS1Q92839 578 aa21.13■□□□□ 0.97
RFTN1-201ENST00000334133 CHMP4BP1P59074 171 aa21.13■□□□□ 0.97
RFTN1-201ENST00000334133 TSR1Q2NL82 804 aaKnown RBP21.13■□□□□ 0.97
RFTN1-201ENST00000334133 RSRC2Q7L4I2 434 aaKnown RBP21.13■□□□□ 0.97
RFTN1-201ENST00000334133 DDX12PQ92771 950 aa21.13■□□□□ 0.97
RFTN1-201ENST00000334133 CUL5Q93034 780 aa21.13■□□□□ 0.97
RFTN1-201ENST00000334133 TMX4Q9H1E5 349 aaPredicted RBP21.13■□□□□ 0.97
RFTN1-201ENST00000334133 RIC8AQ9NPQ8 531 aa21.13■□□□□ 0.97
RFTN1-201ENST00000334133 ARGLU1Q9NWB6 273 aaPredicted RBP21.13■□□□□ 0.97
RFTN1-201ENST00000334133 HDAC6Q9UBN7 1215 aa21.13■□□□□ 0.97
RFTN1-201ENST00000334133 ANKRD31Q8N7Z5 1873 aa21.13■□□□□ 0.97
RFTN1-201ENST00000334133 DMTNQ08495 405 aa21.12■□□□□ 0.97
RFTN1-201ENST00000334133 MIIPQ5JXC2 388 aa21.12■□□□□ 0.97
RFTN1-201ENST00000334133 CNNM4Q6P4Q7 775 aa21.12■□□□□ 0.97
RFTN1-201ENST00000334133 FAM207AQ9NSI2 230 aaPredicted RBP21.12■□□□□ 0.97
RFTN1-201ENST00000334133 PLIN4Q96Q06 1357 aa21.12■□□□□ 0.97
RFTN1-201ENST00000334133 ZBTB5O15062 677 aa21.12■□□□□ 0.97
RFTN1-201ENST00000334133 APBA3O96018 575 aa21.12■□□□□ 0.97
RFTN1-201ENST00000334133 SEPT2Q15019 361 aa21.12■□□□□ 0.97
RFTN1-201ENST00000334133 NLGN1Q8N2Q7 840 aa21.12■□□□□ 0.97
RFTN1-201ENST00000334133 CCDC155Q8N6L0 562 aa21.12■□□□□ 0.97
RFTN1-201ENST00000334133 GOLGA1Q92805 767 aa21.12■□□□□ 0.97
RFTN1-201ENST00000334133 RNF216Q9NWF9 866 aaPredicted RBP21.12■□□□□ 0.97
RFTN1-201ENST00000334133 CAPN11Q9UMQ6 739 aa21.12■□□□□ 0.97
RFTN1-201ENST00000334133 NPHP3-ACAD11A0A0J9YXS1 232 aa21.12■□□□□ 0.97
RFTN1-201ENST00000334133 BICDL2A1A5D9 508 aa21.12■□□□□ 0.97
RFTN1-201ENST00000334133 EPHB6O15197 1021 aa21.12■□□□□ 0.97
RFTN1-201ENST00000334133 PLEKP08567 350 aaPredicted RBP21.12■□□□□ 0.97
RFTN1-201ENST00000334133 STAT3P40763 770 aa21.12■□□□□ 0.97
RFTN1-201ENST00000334133 SLC1A4P43007 532 aa21.12■□□□□ 0.97
RFTN1-201ENST00000334133 BMS1Q14692 1282 aaKnown RBP21.12■□□□□ 0.97
RFTN1-201ENST00000334133 QRICH1Q2TAL8 776 aa21.12■□□□□ 0.97
RFTN1-201ENST00000334133 NCAPH2Q6IBW4 605 aa21.12■□□□□ 0.97
RFTN1-201ENST00000334133 SWAP70Q9UH65 585 aa21.12■□□□□ 0.97
RFTN1-201ENST00000334133 CDC23Q9UJX2 597 aa21.12■□□□□ 0.97
RFTN1-201ENST00000334133 DUSP10Q9Y6W6 482 aa21.12■□□□□ 0.97
RFTN1-201ENST00000334133 RHOXF2BP0C7M4 288 aa21.11■□□□□ 0.97
RFTN1-201ENST00000334133 FXR2P51116 673 aaKnown RBP eCLIP21.11■□□□□ 0.97
RFTN1-201ENST00000334133 HERVK_113P62684 666 aa21.11■□□□□ 0.97
RFTN1-201ENST00000334133 USH1GQ495M9 461 aa21.11■□□□□ 0.97
RFTN1-201ENST00000334133 RHOXF2Q9BQY4 288 aa21.11■□□□□ 0.97
RFTN1-201ENST00000334133 KANSL2Q9H9L4 492 aa21.11■□□□□ 0.97
RFTN1-201ENST00000334133 MAGEF1Q9HAY2 307 aa21.11■□□□□ 0.97
RFTN1-201ENST00000334133 PCDHA1Q9Y5I3 950 aa21.11■□□□□ 0.97
RFTN1-201ENST00000334133 E9PMD0 336 aa21.11■□□□□ 0.97
RFTN1-201ENST00000334133 CHRNA5P30532 468 aa21.11■□□□□ 0.97
RFTN1-201ENST00000334133 IKQ13123 557 aaPredicted RBP21.11■□□□□ 0.97
RFTN1-201ENST00000334133 SH3BP5LQ7L8J4 393 aa21.11■□□□□ 0.97
RFTN1-201ENST00000334133 RAD54LQ92698 747 aa21.11■□□□□ 0.97
RFTN1-201ENST00000334133 FGFBP2Q9BYJ0 223 aa21.11■□□□□ 0.97
RFTN1-201ENST00000334133 LTBP1Q14766 1721 aa21.11■□□□□ 0.97
RFTN1-201ENST00000334133 A0A1W2PQC6 194 aa21.1■□□□□ 0.97
RFTN1-201ENST00000334133 RCCD1A6NED2 376 aa21.1■□□□□ 0.97
RFTN1-201ENST00000334133 SASH3O75995 380 aa21.1■□□□□ 0.97
RFTN1-201ENST00000334133 ALDH1B1P30837 517 aa21.1■□□□□ 0.97
RFTN1-201ENST00000334133 TMC4Q7Z404 712 aa21.1■□□□□ 0.97
RFTN1-201ENST00000334133 SRGAP1Q7Z6B7 1085 aa21.1■□□□□ 0.97
RFTN1-201ENST00000334133 DNAJC7Q99615 494 aa21.1■□□□□ 0.97
RFTN1-201ENST00000334133 NAPGQ99747 312 aaPredicted RBP21.1■□□□□ 0.97
RFTN1-201ENST00000334133 PCDHA12Q9UN75 941 aa21.1■□□□□ 0.97
RFTN1-201ENST00000334133 SRCAPQ6ZRS2 3230 aa21.1■□□□□ 0.97
RFTN1-201ENST00000334133 SRGAP2O75044 1071 aa21.1■□□□□ 0.97
RFTN1-201ENST00000334133 MRPL12P52815 198 aaKnown RBP21.1■□□□□ 0.97
RFTN1-201ENST00000334133 CERKLQ49MI3 558 aaPredicted RBP21.1■□□□□ 0.97
RFTN1-201ENST00000334133 CCDC122Q5T0U0 273 aa21.1■□□□□ 0.97
RFTN1-201ENST00000334133 KRT26Q7Z3Y9 468 aa21.1■□□□□ 0.97
RFTN1-201ENST00000334133 POLD4Q9HCU8 107 aa21.1■□□□□ 0.97
RFTN1-201ENST00000334133 FAM198AQ9UFP1 575 aa21.1■□□□□ 0.97
RFTN1-201ENST00000334133 ZRANB2O95218 330 aaKnown RBP eCLIP21.09■□□□□ 0.97
RFTN1-201ENST00000334133 PLA2G4AP47712 749 aa21.09■□□□□ 0.97
RFTN1-201ENST00000334133 HHIPL2Q6UWX4 724 aa21.09■□□□□ 0.97
RFTN1-201ENST00000334133 GPR161Q8N6U8 529 aaKnown RBP21.09■□□□□ 0.97
RFTN1-201ENST00000334133 LACRTQ9GZZ8 138 aa21.09■□□□□ 0.97
RFTN1-201ENST00000334133 ZHX3Q9H4I2 956 aa21.09■□□□□ 0.97
RFTN1-201ENST00000334133 SLFN13Q68D06 897 aa21.09■□□□□ 0.97
RFTN1-201ENST00000334133 UNC13DQ70J99 1090 aa21.09■□□□□ 0.97
RFTN1-201ENST00000334133 KIAA1328Q86T90 577 aa21.09■□□□□ 0.97
RFTN1-201ENST00000334133 RAB34Q9BZG1 259 aa21.09■□□□□ 0.97
RFTN1-201ENST00000334133 MMRN2Q9H8L6 949 aa21.09■□□□□ 0.97
RFTN1-201ENST00000334133 SUGT1Q9Y2Z0 365 aa21.09■□□□□ 0.97
RFTN1-201ENST00000334133 MYH7BA7E2Y1 1941 aa21.09■□□□□ 0.97
RFTN1-201ENST00000334133 POLR3GO15318 223 aaPredicted RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms