RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 GBP3Q9H0R5 595 aa13.73□□□□□ -0.21
VPS33B-201ENST00000333371 ZNHIT6Q9NWK9 470 aaKnown RBP13.73□□□□□ -0.21
VPS33B-201ENST00000333371 FEZ2Q9UHY8 353 aaPredicted RBP13.73□□□□□ -0.21
VPS33B-201ENST00000333371 VGLL3A8MV65 326 aa13.73□□□□□ -0.21
VPS33B-201ENST00000333371 UFL1O94874 794 aa13.73□□□□□ -0.21
VPS33B-201ENST00000333371 MATR3P43243 847 aaKnown RBP eCLIP13.73□□□□□ -0.219e-6■■□□□ 12
VPS33B-201ENST00000333371 CCDC96Q2M329 555 aa13.73□□□□□ -0.21
VPS33B-201ENST00000333371 FKBP15Q5T1M5 1219 aa13.73□□□□□ -0.21
VPS33B-201ENST00000333371 KRT27Q7Z3Y8 459 aa13.73□□□□□ -0.21
VPS33B-201ENST00000333371 C2CD5Q86YS7 1000 aa13.73□□□□□ -0.21
VPS33B-201ENST00000333371 C10orf67Q8IYJ2 551 aa13.73□□□□□ -0.21
VPS33B-201ENST00000333371 DAGLBQ8NCG7 672 aa13.73□□□□□ -0.21
VPS33B-201ENST00000333371 COG1Q8WTW3 980 aa13.73□□□□□ -0.21
VPS33B-201ENST00000333371 ARHGAP20Q9P2F6 1191 aa13.73□□□□□ -0.21
VPS33B-201ENST00000333371 HPCAL4Q9UM19 191 aa13.73□□□□□ -0.21
VPS33B-201ENST00000333371 IRS2Q9Y4H2 1338 aa13.73□□□□□ -0.21
VPS33B-201ENST00000333371 MOCS3O95396 460 aa13.72□□□□□ -0.21
VPS33B-201ENST00000333371 GSTO1P78417 241 aa13.72□□□□□ -0.21
VPS33B-201ENST00000333371 GPSM2P81274 684 aa13.72□□□□□ -0.21
VPS33B-201ENST00000333371 NONOQ15233 471 aaKnown RBP eCLIP13.72□□□□□ -0.21
VPS33B-201ENST00000333371 LRRC41Q15345 812 aa13.72□□□□□ -0.21
VPS33B-201ENST00000333371 FAM71BQ8TC56 605 aa13.72□□□□□ -0.21
VPS33B-201ENST00000333371 ANKS1AQ92625 1134 aa13.72□□□□□ -0.21
VPS33B-201ENST00000333371 ZMYND12Q9H0C1 365 aa13.72□□□□□ -0.21
VPS33B-201ENST00000333371 ZC3H4Q9UPT8 1303 aaKnown RBP13.72□□□□□ -0.21
VPS33B-201ENST00000333371 MYMKA6NI61 221 aa13.72□□□□□ -0.21
VPS33B-201ENST00000333371 EIF3CLB5ME19 914 aaKnown RBP13.72□□□□□ -0.21
VPS33B-201ENST00000333371 GNAQP50148 359 aa13.72□□□□□ -0.21
VPS33B-201ENST00000333371 CLEC10AQ8IUN9 316 aa13.72□□□□□ -0.21
VPS33B-201ENST00000333371 AMOTL1Q8IY63 956 aa13.72□□□□□ -0.21
VPS33B-201ENST00000333371 EIF3CQ99613 913 aaKnown RBP13.72□□□□□ -0.21
VPS33B-201ENST00000333371 NUDT12Q9BQG2 462 aa13.72□□□□□ -0.21
VPS33B-201ENST00000333371 FRMPD2Q68DX3 1309 aaPredicted RBP13.72□□□□□ -0.21
VPS33B-201ENST00000333371 EP400Q96L91 3159 aa13.72□□□□□ -0.21
VPS33B-201ENST00000333371 POTEMA6NI47 508 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 IPO7O95373 1038 aaKnown RBP13.71□□□□□ -0.21
VPS33B-201ENST00000333371 BAG3O95817 575 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 LEKR1Q6ZMV7 388 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 NEK8Q86SG6 692 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 CCDC42Q96M95 316 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 EYA3Q99504 573 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 MMRN2Q9H8L6 949 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 GGA1Q9UJY5 639 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 MYO1CO00159 1063 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 NCK2O43639 380 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 SLC37A4O43826 429 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 GGCXP38435 758 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 PRPHP41219 470 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 CDK8P49336 464 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 SLC7A5Q01650 507 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 KIF5AQ12840 1032 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 GRB10Q13322 594 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 SECISBP2LQ93073 1101 aaKnown RBP13.71□□□□□ -0.21
VPS33B-201ENST00000333371 COA7Q96BR5 231 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 CEP95Q96GE4 821 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 C7orf25Q9BPX7 421 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 BLOC1S4Q9NUP1 217 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 SALL4Q9UJQ4 1053 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 SNED1Q8TER0 1413 aa13.71□□□□□ -0.21
VPS33B-201ENST00000333371 BICDL2A1A5D9 508 aa13.71□□□□□ -0.22
VPS33B-201ENST00000333371 USP17L5A8MUK1 530 aa13.71□□□□□ -0.22
VPS33B-201ENST00000333371 TDP2O95551 362 aa13.71□□□□□ -0.22
VPS33B-201ENST00000333371 ATP2B4P23634 1241 aa13.71□□□□□ -0.22
VPS33B-201ENST00000333371 EIF4A3P38919 411 aaKnown RBP13.71□□□□□ -0.22
VPS33B-201ENST00000333371 VAV2P52735 878 aa13.71□□□□□ -0.22
VPS33B-201ENST00000333371 EIF6P56537 245 aaKnown RBP13.71□□□□□ -0.22
VPS33B-201ENST00000333371 TUBB4BP68371 445 aa13.71□□□□□ -0.22
VPS33B-201ENST00000333371 NFRKBQ6P4R8 1299 aa13.71□□□□□ -0.22
VPS33B-201ENST00000333371 KCNK18Q7Z418 384 aa13.71□□□□□ -0.22
VPS33B-201ENST00000333371 KANSL2Q9H9L4 492 aa13.71□□□□□ -0.22
VPS33B-201ENST00000333371 DMGDHQ9UI17 866 aaKnown RBP13.71□□□□□ -0.22
VPS33B-201ENST00000333371 BRWD3Q6RI45 1802 aa13.7□□□□□ -0.22
VPS33B-201ENST00000333371 DDX60LQ5H9U9 1706 aaKnown RBP13.7□□□□□ -0.22
VPS33B-201ENST00000333371 MYL1P05976 194 aa13.7□□□□□ -0.22
VPS33B-201ENST00000333371 LDHCP07864 332 aa13.7□□□□□ -0.22
VPS33B-201ENST00000333371 CRY2Q49AN0 593 aa13.7□□□□□ -0.22
VPS33B-201ENST00000333371 LRRC31Q6UY01 552 aa13.7□□□□□ -0.22
VPS33B-201ENST00000333371 TMC4Q7Z404 712 aa13.7□□□□□ -0.22
VPS33B-201ENST00000333371 RRP36Q96EU6 259 aaKnown RBP13.7□□□□□ -0.22
VPS33B-201ENST00000333371 PNMA5Q96PV4 448 aa13.7□□□□□ -0.22
VPS33B-201ENST00000333371 SELENOOQ9BVL4 669 aa13.7□□□□□ -0.22
VPS33B-201ENST00000333371 IFIH1Q9BYX4 1025 aaKnown RBP13.7□□□□□ -0.22
VPS33B-201ENST00000333371 LAD1O00515 517 aa13.7□□□□□ -0.22
VPS33B-201ENST00000333371 EDIL3O43854 480 aa13.7□□□□□ -0.22
VPS33B-201ENST00000333371 PRPF6O94906 941 aaKnown RBP13.7□□□□□ -0.22
VPS33B-201ENST00000333371 BTDP43251 543 aa13.7□□□□□ -0.22
VPS33B-201ENST00000333371 APBA1Q02410 837 aa13.7□□□□□ -0.22
VPS33B-201ENST00000333371 KRT25Q7Z3Z0 450 aa13.7□□□□□ -0.22
VPS33B-201ENST00000333371 CREG2Q8IUH2 290 aa13.7□□□□□ -0.22
VPS33B-201ENST00000333371 ZSCAN29Q8IWY8 852 aaPredicted RBP13.7□□□□□ -0.22
VPS33B-201ENST00000333371 NOC3LQ8WTT2 800 aaKnown RBP13.7□□□□□ -0.22
VPS33B-201ENST00000333371 PURBQ96QR8 312 aaKnown RBP13.7□□□□□ -0.22
VPS33B-201ENST00000333371 ERGIC2Q96RQ1 377 aa13.7□□□□□ -0.22
VPS33B-201ENST00000333371 LRRC1Q9BTT6 524 aa13.7□□□□□ -0.22
VPS33B-201ENST00000333371 NUP58Q9BVL2 599 aa13.7□□□□□ -0.22
VPS33B-201ENST00000333371 SIK3Q9Y2K2 1263 aa13.7□□□□□ -0.22
VPS33B-201ENST00000333371 RRP15Q9Y3B9 282 aaKnown RBP13.7□□□□□ -0.22
VPS33B-201ENST00000333371 PCDHA13Q9Y5I0 950 aa13.7□□□□□ -0.22
VPS33B-201ENST00000333371 ROBO3Q96MS0 1386 aa13.69□□□□□ -0.22
VPS33B-201ENST00000333371 LRRC53A6NM62 1247 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms