RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 TRIM22Q8IYM9 498 aa18.86■□□□□ 0.61
C11orf88-201ENST00000332814 LENG1Q96BZ8 264 aaPredicted RBP18.86■□□□□ 0.61
C11orf88-201ENST00000332814 LARP6Q9BRS8 491 aaKnown RBP18.86■□□□□ 0.61
C11orf88-201ENST00000332814 C22orf23Q9BZE7 217 aa18.86■□□□□ 0.61
C11orf88-201ENST00000332814 KATNBL1Q9H079 304 aa18.86■□□□□ 0.61
C11orf88-201ENST00000332814 SLKQ9H2G2 1235 aaPredicted RBP18.86■□□□□ 0.61
C11orf88-201ENST00000332814 PSTPIP2Q9H939 334 aa18.86■□□□□ 0.61
C11orf88-201ENST00000332814 PXMP2Q9NR77 195 aa18.86■□□□□ 0.61
C11orf88-201ENST00000332814 PGK1P00558 417 aa18.85■□□□□ 0.61
C11orf88-201ENST00000332814 FUT2Q10981 343 aa18.85■□□□□ 0.61
C11orf88-201ENST00000332814 WWC2Q6AWC2 1192 aa18.85■□□□□ 0.61
C11orf88-201ENST00000332814 IQSEC1Q6DN90 963 aa18.85■□□□□ 0.61
C11orf88-201ENST00000332814 IL17RAQ96F46 866 aa18.85■□□□□ 0.61
C11orf88-201ENST00000332814 SLC26A6Q9BXS9 759 aa18.85■□□□□ 0.61
C11orf88-201ENST00000332814 ALDH8A1Q9H2A2 487 aaPredicted RBP18.85■□□□□ 0.61
C11orf88-201ENST00000332814 NCOA5Q9HCD5 579 aaKnown RBP18.85■□□□□ 0.61
C11orf88-201ENST00000332814 KIAA0100Q14667 2235 aaKnown RBP18.85■□□□□ 0.61
C11orf88-201ENST00000332814 FRMPD3Q5JV73 1810 aa18.84■□□□□ 0.61
C11orf88-201ENST00000332814 SYNRGQ9UMZ2 1314 aa18.84■□□□□ 0.61
C11orf88-201ENST00000332814 LRRC37A2A6NM11 1700 aa18.84■□□□□ 0.61
C11orf88-201ENST00000332814 C6orf222P0C671 652 aaPredicted RBP18.84■□□□□ 0.61
C11orf88-201ENST00000332814 MYCLP12524 364 aaPredicted RBP18.84■□□□□ 0.61
C11orf88-201ENST00000332814 AK2P54819 239 aa18.84■□□□□ 0.61
C11orf88-201ENST00000332814 MAPK8IP2Q13387 824 aaPredicted RBP18.84■□□□□ 0.61
C11orf88-201ENST00000332814 LRRC41Q15345 812 aa18.84■□□□□ 0.61
C11orf88-201ENST00000332814 UBE2Q1Q7Z7E8 422 aa18.84■□□□□ 0.61
C11orf88-201ENST00000332814 SCFD2Q8WU76 684 aa18.84■□□□□ 0.61
C11orf88-201ENST00000332814 CCDC12Q8WUD4 166 aaPredicted RBP18.84■□□□□ 0.61
C11orf88-201ENST00000332814 DPF3Q92784 378 aa18.84■□□□□ 0.61
C11orf88-201ENST00000332814 RNF26Q9BY78 433 aaPredicted RBP18.84■□□□□ 0.61
C11orf88-201ENST00000332814 AP5M1Q9H0R1 490 aa18.84■□□□□ 0.61
C11orf88-201ENST00000332814 EHMT1Q9H9B1 1298 aa18.84■□□□□ 0.61
C11orf88-201ENST00000332814 PDGFCQ9NRA1 345 aa18.84■□□□□ 0.61
C11orf88-201ENST00000332814 SMCHD1A6NHR9 2005 aa18.84■□□□□ 0.61
C11orf88-201ENST00000332814 LCTP09848 1927 aa18.84■□□□□ 0.61
C11orf88-201ENST00000332814 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.83■□□□□ 0.6
C11orf88-201ENST00000332814 SPDYE3A6NKU9 549 aa18.83■□□□□ 0.6
C11orf88-201ENST00000332814 PIK3CDO00329 1044 aa18.83■□□□□ 0.6
C11orf88-201ENST00000332814 PRPF3O43395 683 aaKnown RBP18.83■□□□□ 0.6
C11orf88-201ENST00000332814 CDKL5O76039 1030 aa18.83■□□□□ 0.6
C11orf88-201ENST00000332814 NR3C2P08235 984 aa18.83■□□□□ 0.6
C11orf88-201ENST00000332814 SCG2P13521 617 aa18.83■□□□□ 0.6
C11orf88-201ENST00000332814 IFNAR1P17181 557 aa18.83■□□□□ 0.6
C11orf88-201ENST00000332814 CCND2P30279 289 aa18.83■□□□□ 0.6
C11orf88-201ENST00000332814 ADCY7P51828 1080 aa18.83■□□□□ 0.6
C11orf88-201ENST00000332814 SSRP1Q08945 709 aaKnown RBP18.83■□□□□ 0.6
C11orf88-201ENST00000332814 TTLL4Q14679 1199 aa18.83■□□□□ 0.6
C11orf88-201ENST00000332814 PFKFB3Q16875 520 aaPredicted RBP18.83■□□□□ 0.6
C11orf88-201ENST00000332814 TAPT1Q6NXT6 567 aa18.83■□□□□ 0.6
C11orf88-201ENST00000332814 USP17L6PQ6QN14 398 aa18.83■□□□□ 0.6
C11orf88-201ENST00000332814 SEPT14Q6ZU15 432 aa18.83■□□□□ 0.6
C11orf88-201ENST00000332814 TLK2Q86UE8 772 aa18.83■□□□□ 0.6
C11orf88-201ENST00000332814 PHKBQ93100 1093 aa18.83■□□□□ 0.6
C11orf88-201ENST00000332814 PDCD2LQ9BRP1 358 aa18.83■□□□□ 0.6
C11orf88-201ENST00000332814 WDR11Q9BZH6 1224 aa18.83■□□□□ 0.6
C11orf88-201ENST00000332814 SENP6Q9GZR1 1112 aaPredicted RBP18.83■□□□□ 0.6
C11orf88-201ENST00000332814 GLT8D2Q9H1C3 349 aa18.83■□□□□ 0.6
C11orf88-201ENST00000332814 BARHL2Q9NY43 387 aa18.83■□□□□ 0.6
C11orf88-201ENST00000332814 EIF3JO75822 258 aaKnown RBP18.82■□□□□ 0.6
C11orf88-201ENST00000332814 SMPD1P17405 629 aa18.82■□□□□ 0.6
C11orf88-201ENST00000332814 MNX1P50219 401 aaPredicted RBP18.82■□□□□ 0.6
C11orf88-201ENST00000332814 PGM5Q15124 567 aa18.82■□□□□ 0.6
C11orf88-201ENST00000332814 SMCO2A6NFE2 343 aa18.81■□□□□ 0.6
C11orf88-201ENST00000332814 STXBP3O00186 592 aa18.81■□□□□ 0.6
C11orf88-201ENST00000332814 MEIS2O14770 477 aa18.81■□□□□ 0.6
C11orf88-201ENST00000332814 NKRFO15226 690 aaKnown RBP eCLIP18.81■□□□□ 0.6
C11orf88-201ENST00000332814 DYNC1LI2O43237 492 aaPredicted RBP18.81■□□□□ 0.6
C11orf88-201ENST00000332814 ADCY6O43306 1168 aa18.81■□□□□ 0.6
C11orf88-201ENST00000332814 ZEB2O60315 1214 aa18.81■□□□□ 0.6
C11orf88-201ENST00000332814 PPFIA3O75145 1194 aa18.81■□□□□ 0.6
C11orf88-201ENST00000332814 ADAMTS4O75173 837 aa18.81■□□□□ 0.6
C11orf88-201ENST00000332814 TXNP10599 105 aaKnown RBP18.81■□□□□ 0.6
C11orf88-201ENST00000332814 GJA9P57773 515 aa18.81■□□□□ 0.6
C11orf88-201ENST00000332814 UBE2SQ16763 222 aa18.81■□□□□ 0.6
C11orf88-201ENST00000332814 DUSP28Q4G0W2 176 aa18.81■□□□□ 0.6
C11orf88-201ENST00000332814 TEX2Q8IWB9 1127 aa18.81■□□□□ 0.6
C11orf88-201ENST00000332814 PCSK9Q8NBP7 692 aaKnown RBP18.81■□□□□ 0.6
C11orf88-201ENST00000332814 CCDC148Q8NFR7 591 aa18.81■□□□□ 0.6
C11orf88-201ENST00000332814 TPCN1Q9ULQ1 816 aa18.81■□□□□ 0.6
C11orf88-201ENST00000332814 BAZ2BQ9UIF8 2168 aaKnown RBP18.81■□□□□ 0.6
C11orf88-201ENST00000332814 EVI5O60447 810 aa18.8■□□□□ 0.6
C11orf88-201ENST00000332814 COL6A1P12109 1028 aa18.8■□□□□ 0.6
C11orf88-201ENST00000332814 RBM25P49756 843 aaKnown RBP18.8■□□□□ 0.6
C11orf88-201ENST00000332814 NTRK3Q16288 839 aa18.8■□□□□ 0.6
C11orf88-201ENST00000332814 GNPTABQ3T906 1256 aa18.8■□□□□ 0.6
C11orf88-201ENST00000332814 BRDTQ58F21 947 aaPredicted RBP18.8■□□□□ 0.6
C11orf88-201ENST00000332814 GNASQ5JWF2 1037 aa18.8■□□□□ 0.6
C11orf88-201ENST00000332814 TSEN34Q9BSV6 310 aaKnown RBP18.8■□□□□ 0.6
C11orf88-201ENST00000332814 UPF3AQ9H1J1 476 aaKnown RBP18.8■□□□□ 0.6
C11orf88-201ENST00000332814 C6orf50Q9HD87 102 aa18.8■□□□□ 0.6
C11orf88-201ENST00000332814 RIC8AQ9NPQ8 531 aa18.8■□□□□ 0.6
C11orf88-201ENST00000332814 GNEQ9Y223 722 aaKnown RBP18.8■□□□□ 0.6
C11orf88-201ENST00000332814 Q9Y3F1 56 aa18.8■□□□□ 0.6
C11orf88-201ENST00000332814 MRVI1Q9Y6F6 885 aa18.8■□□□□ 0.6
C11orf88-201ENST00000332814 MCM3APO60318 1980 aa18.8■□□□□ 0.6
C11orf88-201ENST00000332814 RBM47A0AV96 593 aaKnown RBP18.79■□□□□ 0.6
C11orf88-201ENST00000332814 MOXD2PA6NHM9 499 aa18.79■□□□□ 0.6
C11orf88-201ENST00000332814 PFKFB2O60825 505 aa18.79■□□□□ 0.6
C11orf88-201ENST00000332814 STAM2O75886 525 aa18.79■□□□□ 0.6
C11orf88-201ENST00000332814 DEXIO95424 95 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms