RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 TTBK2Q6IQ55 1244 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 DHX37Q8IY37 1157 aaKnown RBP13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 GIMAP8Q8ND71 665 aaPredicted RBP13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 LARP4BQ92615 738 aaKnown RBP13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 MS4A14Q96JA4 679 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 NUDT12Q9BQG2 462 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 MXD3Q9BW11 206 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 RAB34Q9BZG1 259 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 SEPT11Q9NVA2 429 aaKnown RBP13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 CAPN6Q9Y6Q1 641 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 NUP98P52948 1817 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 PDE2AO00408 941 aaPredicted RBP13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 ATP1A2P50993 1020 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 DHTKD1Q96HY7 919 aaPredicted RBP13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 ITIH6Q6UXX5 1313 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 PKD1L3Q7Z443 1732 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 NPHP3-ACAD11A0A0J9YXS1 232 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 GOLGA6BA6NDN3 693 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 MYMKA6NI61 221 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 TMCO5BA8MYB1 307 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 MEIS1O00470 390 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 ADCY7P51828 1080 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 CT47A1Q5JQC4 288 aaPredicted RBP13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 KLHL7Q8IXQ5 586 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 C4orf32Q8N8J7 132 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 EXOC4Q96A65 974 aa13.1□□□□□ -0.31
EFCAB13-201ENST00000331493 MYBL2P10244 700 aa13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 USP14P54578 494 aa13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 DOK7Q18PE1 504 aa13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 DCAF17Q5H9S7 520 aaPredicted RBP13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 TRAPPC3LQ5T215 181 aa13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 FAM196AQ6ZSG2 479 aa13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 DDX12PQ92771 950 aa13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 LRRC1Q9BTT6 524 aa13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 BCCIPQ9P287 314 aaKnown RBP eCLIP13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 PCDHA13Q9Y5I0 950 aa13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 PARP4Q9UKK3 1724 aaKnown RBP13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 SLC37A4O43826 429 aa13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 KLRC4O43908 158 aa13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 RHOBTB3O94955 611 aa13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 USH1GQ495M9 461 aa13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 GOLPH3Q9H4A6 298 aa13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.09□□□□□ -0.317e-8■■■■■ 186.3
EFCAB13-201ENST00000331493 SPATA31A1Q5TZJ5 1347 aa13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 LRRC10BA6NIK2 292 aa13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 SRGNP10124 158 aa13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 IBSPP21815 317 aaPredicted RBP13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 IQCEQ6IPM2 695 aa13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 NUP58Q9BVL2 599 aa13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 MYO1AQ9UBC5 1043 aa13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 KIAA1024Q9UPX6 916 aa13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 ADAMTSL3P82987 1691 aa13.09□□□□□ -0.31
EFCAB13-201ENST00000331493 PLEKHG2Q9H7P9 1386 aa13.08□□□□□ -0.31
EFCAB13-201ENST00000331493 GOLGA6CA6NDK9 693 aa13.08□□□□□ -0.31
EFCAB13-201ENST00000331493 USP17L15C9J2P7 530 aa13.08□□□□□ -0.31
EFCAB13-201ENST00000331493 USP17L13C9JLJ4 530 aa13.08□□□□□ -0.31
EFCAB13-201ENST00000331493 USP17L11C9JVI0 530 aa13.08□□□□□ -0.31
EFCAB13-201ENST00000331493 USP17L18D6R9N7 530 aa13.08□□□□□ -0.31
EFCAB13-201ENST00000331493 USP17L22D6RA61 530 aa13.08□□□□□ -0.31
EFCAB13-201ENST00000331493 USP17L17D6RBQ6 530 aa13.08□□□□□ -0.31
EFCAB13-201ENST00000331493 USP17L19D6RCP7 530 aa13.08□□□□□ -0.31
EFCAB13-201ENST00000331493 USP17L20D6RJB6 530 aa13.08□□□□□ -0.31
EFCAB13-201ENST00000331493 GOLGA6DP0CG33 693 aa13.08□□□□□ -0.31
EFCAB13-201ENST00000331493 USP17L24Q0WX57 530 aa13.08□□□□□ -0.31
EFCAB13-201ENST00000331493 USP17L6PQ6QN14 398 aa13.08□□□□□ -0.31
EFCAB13-201ENST00000331493 SPAG5Q96R06 1193 aa13.08□□□□□ -0.31
EFCAB13-201ENST00000331493 SELENOOQ9BVL4 669 aa13.08□□□□□ -0.31
EFCAB13-201ENST00000331493 LSM14BQ9BX40 385 aaKnown RBP13.08□□□□□ -0.31
EFCAB13-201ENST00000331493 SEMA6BQ9H3T3 888 aa13.08□□□□□ -0.31
EFCAB13-201ENST00000331493 KBTBD4Q9NVX7 518 aa13.08□□□□□ -0.31
EFCAB13-201ENST00000331493 GOLGA6AQ9NYA3 693 aa13.08□□□□□ -0.31
EFCAB13-201ENST00000331493 DMGDHQ9UI17 866 aaKnown RBP13.08□□□□□ -0.31
EFCAB13-201ENST00000331493 E9PMD0 336 aa13.08□□□□□ -0.32
EFCAB13-201ENST00000331493 MYO1CO00159 1063 aa13.08□□□□□ -0.32
EFCAB13-201ENST00000331493 CLSTN1O94985 981 aa13.08□□□□□ -0.32
EFCAB13-201ENST00000331493 CYP4A11Q02928 519 aa13.08□□□□□ -0.32
EFCAB13-201ENST00000331493 EHHADHQ08426 723 aa13.08□□□□□ -0.32
EFCAB13-201ENST00000331493 AMIGO3Q86WK7 504 aa13.08□□□□□ -0.32
EFCAB13-201ENST00000331493 PLCD3Q8N3E9 789 aa13.08□□□□□ -0.32
EFCAB13-201ENST00000331493 RRP15Q9Y3B9 282 aaKnown RBP13.08□□□□□ -0.32
EFCAB13-201ENST00000331493 GLI3P10071 1580 aa13.08□□□□□ -0.32
EFCAB13-201ENST00000331493 TUBB2AQ13885 445 aa13.08□□□□□ -0.32
EFCAB13-201ENST00000331493 C8orf74Q6P047 294 aa13.08□□□□□ -0.32
EFCAB13-201ENST00000331493 KIAA0895Q8NCT3 520 aa13.08□□□□□ -0.32
EFCAB13-201ENST00000331493 GOLGA5Q8TBA6 731 aa13.08□□□□□ -0.32
EFCAB13-201ENST00000331493 TUBB2BQ9BVA1 445 aa13.08□□□□□ -0.32
EFCAB13-201ENST00000331493 GGA1Q9UJY5 639 aa13.08□□□□□ -0.32
EFCAB13-201ENST00000331493 LMTK3Q96Q04 1460 aa13.08□□□□□ -0.32
EFCAB13-201ENST00000331493 PDS5AQ29RF7 1337 aaKnown RBP13.08□□□□□ -0.32
EFCAB13-201ENST00000331493 VWA3BQ502W6 1294 aa13.07□□□□□ -0.32
EFCAB13-201ENST00000331493 TRAPPC11Q7Z392 1133 aa13.07□□□□□ -0.32
EFCAB13-201ENST00000331493 CCSER1Q9C0I3 900 aa13.07□□□□□ -0.32
EFCAB13-201ENST00000331493 ADAMTS1Q9UHI8 967 aa13.07□□□□□ -0.32
EFCAB13-201ENST00000331493 NARFQ9UHQ1 456 aa13.07□□□□□ -0.32
EFCAB13-201ENST00000331493 PCDHA12Q9UN75 941 aa13.07□□□□□ -0.32
EFCAB13-201ENST00000331493 SLC1A4P43007 532 aa13.07□□□□□ -0.32
EFCAB13-201ENST00000331493 VAV2P52735 878 aa13.07□□□□□ -0.32
EFCAB13-201ENST00000331493 TMED8Q6PL24 325 aaPredicted RBP13.07□□□□□ -0.32
EFCAB13-201ENST00000331493 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.07□□□□□ -0.32
EFCAB13-201ENST00000331493 MAATS1Q7Z4T9 603 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms