RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 UBE2Q2Q8WVN8 375 aa16.63■□□□□ 0.25
CLCNKA-201ENST00000331433 HAS1Q92839 578 aa16.63■□□□□ 0.25
CLCNKA-201ENST00000331433 TUBGCP2Q9BSJ2 902 aa16.63■□□□□ 0.25
CLCNKA-201ENST00000331433 DHX36Q9H2U1 1008 aaKnown RBP16.63■□□□□ 0.25
CLCNKA-201ENST00000331433 TADA3O75528 432 aa16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 GDF11O95390 407 aa16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 ABL1P00519 1130 aa16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 MAP3K9P80192 1104 aa16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 SEPT2Q15019 361 aa16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 PPP4R3AQ6IN85 833 aa16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 CNNM4Q6P4Q7 775 aa16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 CYP26C1Q6V0L0 522 aa16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 CNOT6LQ96LI5 555 aaKnown RBP16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 CHP1Q99653 195 aa16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 RAB34Q9BZG1 259 aa16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 PI4KBQ9UBF8 816 aa16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 STK17AQ9UEE5 414 aa16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 MRFAP1Q9Y605 127 aa16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 BICDL2A1A5D9 508 aa16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 PDIA5Q14554 519 aa16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 ECM1Q16610 540 aa16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 AOC3Q16853 763 aa16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 KRT79Q5XKE5 535 aa16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 SLFN13Q68D06 897 aa16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 UBXN4Q92575 508 aa16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 IDI2Q9BXS1 227 aa16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 RGS17Q9UGC6 210 aaPredicted RBP16.62■□□□□ 0.25
CLCNKA-201ENST00000331433 SIAH1Q8IUQ4 282 aa16.61■□□□□ 0.25
CLCNKA-201ENST00000331433 NOC3LQ8WTT2 800 aaKnown RBP16.61■□□□□ 0.25
CLCNKA-201ENST00000331433 RAD54LQ92698 747 aa16.61■□□□□ 0.25
CLCNKA-201ENST00000331433 FEZ1Q99689 392 aa16.61■□□□□ 0.25
CLCNKA-201ENST00000331433 SLF1Q9BQI6 1058 aa16.61■□□□□ 0.25
CLCNKA-201ENST00000331433 TRIM34Q9BYJ4 488 aa16.61■□□□□ 0.25
CLCNKA-201ENST00000331433 SEMA6BQ9H3T3 888 aa16.61■□□□□ 0.25
CLCNKA-201ENST00000331433 PCDHA1Q9Y5I3 950 aa16.61■□□□□ 0.25
CLCNKA-201ENST00000331433 A0A1W2PQC6 194 aa16.61■□□□□ 0.25
CLCNKA-201ENST00000331433 KLK7P49862 253 aa16.61■□□□□ 0.25
CLCNKA-201ENST00000331433 SNAP25P60880 206 aa16.61■□□□□ 0.25
CLCNKA-201ENST00000331433 KANSL2Q9H9L4 492 aa16.61■□□□□ 0.25
CLCNKA-201ENST00000331433 KIF5CO60282 957 aa16.6■□□□□ 0.25
CLCNKA-201ENST00000331433 MARCH6O60337 910 aa16.6■□□□□ 0.25
CLCNKA-201ENST00000331433 IDEP14735 1019 aa16.6■□□□□ 0.25
CLCNKA-201ENST00000331433 H2AFXP16104 143 aaPredicted RBP16.6■□□□□ 0.25
CLCNKA-201ENST00000331433 ICA1Q05084 483 aa16.6■□□□□ 0.25
CLCNKA-201ENST00000331433 CDC37Q16543 378 aaPredicted RBP16.6■□□□□ 0.25
CLCNKA-201ENST00000331433 UNC13DQ70J99 1090 aa16.6■□□□□ 0.25
CLCNKA-201ENST00000331433 MRIQ9BWK5 157 aa16.6■□□□□ 0.25
CLCNKA-201ENST00000331433 TDRD3Q9H7E2 651 aaKnown RBP16.6■□□□□ 0.25
CLCNKA-201ENST00000331433 DDX41Q9UJV9 622 aaKnown RBP16.6■□□□□ 0.25
CLCNKA-201ENST00000331433 ATF5Q9Y2D1 282 aaPredicted RBP16.6■□□□□ 0.25
CLCNKA-201ENST00000331433 LUC7L2Q9Y383 392 aaKnown RBP16.6■□□□□ 0.25
CLCNKA-201ENST00000331433 MTIF2P46199 727 aaKnown RBP16.6■□□□□ 0.25
CLCNKA-201ENST00000331433 DNM2P50570 870 aa16.6■□□□□ 0.25
CLCNKA-201ENST00000331433 PPP2R3AQ06190 1150 aa16.6■□□□□ 0.25
CLCNKA-201ENST00000331433 TMEM119Q4V9L6 283 aa16.6■□□□□ 0.25
CLCNKA-201ENST00000331433 ZNF569Q5MCW4 686 aa16.6■□□□□ 0.25
CLCNKA-201ENST00000331433 STYK1Q6J9G0 422 aa16.6■□□□□ 0.25
CLCNKA-201ENST00000331433 MKL1Q969V6 931 aa16.6■□□□□ 0.25
CLCNKA-201ENST00000331433 EPC1Q9H2F5 836 aa16.6■□□□□ 0.25
CLCNKA-201ENST00000331433 PRDM10Q9NQV6 1147 aa16.6■□□□□ 0.25
CLCNKA-201ENST00000331433 NYAP2Q9P242 653 aa16.6■□□□□ 0.25
CLCNKA-201ENST00000331433 EFCAB8A8MWE9 144 aa16.59■□□□□ 0.25
CLCNKA-201ENST00000331433 OR8K1Q8NGG5 319 aa16.59■□□□□ 0.25
CLCNKA-201ENST00000331433 DCAF4Q8WV16 495 aa16.59■□□□□ 0.25
CLCNKA-201ENST00000331433 DDX12PQ92771 950 aa16.59■□□□□ 0.25
CLCNKA-201ENST00000331433 ZNF446Q9NWS9 450 aa16.59■□□□□ 0.25
CLCNKA-201ENST00000331433 ARFGEF1Q9Y6D6 1849 aa16.59■□□□□ 0.25
CLCNKA-201ENST00000331433 HDLBPQ00341 1268 aaKnown RBP16.59■□□□□ 0.25
CLCNKA-201ENST00000331433 TBC1D8BQ0IIM8 1120 aa16.59■□□□□ 0.25
CLCNKA-201ENST00000331433 MIIPQ5JXC2 388 aa16.59■□□□□ 0.25
CLCNKA-201ENST00000331433 ZNF772Q68DY9 489 aaPredicted RBP16.59■□□□□ 0.25
CLCNKA-201ENST00000331433 TATDN1Q6P1N9 297 aa16.59■□□□□ 0.25
CLCNKA-201ENST00000331433 GLIS3Q8NEA6 775 aa16.59■□□□□ 0.25
CLCNKA-201ENST00000331433 DNAJC7Q99615 494 aa16.59■□□□□ 0.25
CLCNKA-201ENST00000331433 NOC4LQ9BVI4 516 aaKnown RBP16.59■□□□□ 0.25
CLCNKA-201ENST00000331433 AGPAT5Q9NUQ2 364 aa16.59■□□□□ 0.25
CLCNKA-201ENST00000331433 OGFRQ9NZT2 677 aa16.59■□□□□ 0.25
CLCNKA-201ENST00000331433 SERPINA10Q9UK55 444 aa16.59■□□□□ 0.25
CLCNKA-201ENST00000331433 CAPN11Q9UMQ6 739 aa16.59■□□□□ 0.25
CLCNKA-201ENST00000331433 PCDHA12Q9UN75 941 aa16.59■□□□□ 0.25
CLCNKA-201ENST00000331433 ZNF646O15015 1829 aaPredicted RBP16.58■□□□□ 0.25
CLCNKA-201ENST00000331433 PVALEFA0A1B0GWK0 134 aa16.58■□□□□ 0.25
CLCNKA-201ENST00000331433 RASSF10A6NK89 507 aa16.58■□□□□ 0.25
CLCNKA-201ENST00000331433 FKBP1AP62942 108 aaKnown RBP16.58■□□□□ 0.25
CLCNKA-201ENST00000331433 JAG1P78504 1218 aa16.58■□□□□ 0.25
CLCNKA-201ENST00000331433 COBLL1Q53SF7 1204 aa16.58■□□□□ 0.25
CLCNKA-201ENST00000331433 CENPPQ6IPU0 288 aa16.58■□□□□ 0.25
CLCNKA-201ENST00000331433 FAM114A1Q8IWE2 563 aa16.58■□□□□ 0.25
CLCNKA-201ENST00000331433 F5H6K3 240 aa16.58■□□□□ 0.24
CLCNKA-201ENST00000331433 TAL1P17542 331 aaPredicted RBP16.58■□□□□ 0.24
CLCNKA-201ENST00000331433 TRIM21P19474 475 aaKnown RBP16.58■□□□□ 0.24
CLCNKA-201ENST00000331433 PPP1R2P41236 205 aa16.58■□□□□ 0.24
CLCNKA-201ENST00000331433 ARHGAP25P42331 645 aa16.58■□□□□ 0.24
CLCNKA-201ENST00000331433 CLCN6P51797 869 aa16.58■□□□□ 0.24
CLCNKA-201ENST00000331433 KLRC3Q07444 240 aa16.58■□□□□ 0.24
CLCNKA-201ENST00000331433 LRRC41Q15345 812 aa16.58■□□□□ 0.24
CLCNKA-201ENST00000331433 ABCB5Q2M3G0 1257 aa16.58■□□□□ 0.24
CLCNKA-201ENST00000331433 WDR59Q6PJI9 974 aa16.58■□□□□ 0.24
CLCNKA-201ENST00000331433 SLC35F6Q8N357 371 aa16.58■□□□□ 0.24
CLCNKA-201ENST00000331433 ANO3Q9BYT9 981 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms