RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 ARHGAP20Q9P2F6 1191 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 MYH2Q9UKX2 1941 aa8.74□□□□□ -1.01
VMA21-201ENST00000330374 A0A1W2PQC6 194 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 PDE8AO60658 829 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 STARD3NLO95772 234 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 CYP2D6P10635 497 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 HDLBPQ00341 1268 aaKnown RBP8.73□□□□□ -1.01
VMA21-201ENST00000330374 TTI2Q6NXR4 508 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 GBP6Q6ZN66 633 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 DYMQ7RTS9 669 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 CACNA2D4Q7Z3S7 1137 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 HEATR3Q7Z4Q2 680 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 PNMA1Q8ND90 353 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 NOC3LQ8WTT2 800 aaKnown RBP8.73□□□□□ -1.01
VMA21-201ENST00000330374 TNFRSF25Q93038 417 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 MRRFQ96E11 262 aaKnown RBP8.73□□□□□ -1.01
VMA21-201ENST00000330374 ZBTB1Q9Y2K1 713 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 HYOU1Q9Y4L1 999 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 ANO9A1A5B4 782 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 LSP1P33241 339 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 RDXP35241 583 aaKnown RBP8.73□□□□□ -1.01
VMA21-201ENST00000330374 USP8P40818 1118 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 CEP85LQ5SZL2 805 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 LRRC15Q8TF66 581 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.73□□□□□ -1.01
VMA21-201ENST00000330374 TJP1Q07157 1748 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 CNTNAP5Q8WYK1 1306 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 TSPY2A6NKD2 308 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 LRRC53A6NM62 1247 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 PLCG1P19174 1290 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 DNAAF5Q86Y56 855 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 P2RX5Q93086 422 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 CABS1Q96KC9 395 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 THAP9Q9H5L6 903 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 SH2D4AQ9H788 454 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 SSUH2Q9Y2M2 353 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 ATRNO75882 1429 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 SLC1A4P43007 532 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 CLK2P49760 499 aaKnown RBP8.73□□□□□ -1.01
VMA21-201ENST00000330374 MEA1Q16626 185 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 ODF2Q5BJF6 829 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 B4GALNT4Q76KP1 1039 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 CCDC170Q8IYT3 715 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 BLIDQ8IZY5 108 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 FNBP4Q8N3X1 1017 aaPredicted RBP8.73□□□□□ -1.01
VMA21-201ENST00000330374 MMGT1Q8N4V1 131 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 NLRP7Q8WX94 980 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 PLA2G12BQ9BX93 195 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 USP54Q70EL1 1684 aa8.73□□□□□ -1.01
VMA21-201ENST00000330374 FRMD3A2A2Y4 597 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 ERVV-2B6SEH9 535 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 NR1D1P20393 614 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 SEMA3FQ13275 785 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 SF3B2Q13435 895 aaKnown RBP8.72□□□□□ -1.01
VMA21-201ENST00000330374 LETM2Q2VYF4 491 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 NAA35Q5VZE5 725 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 MTMR8Q96EF0 704 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 SH3GL2Q99962 352 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 GOLPH3Q9H4A6 298 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 ZNF233A6NK53 670 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 MEFVO15553 781 aaPredicted RBP8.72□□□□□ -1.01
VMA21-201ENST00000330374 KLRC4O43908 158 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 SSTR3P32745 418 aaPredicted RBP8.72□□□□□ -1.01
VMA21-201ENST00000330374 EVA1CP58658 441 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 LRRC41Q15345 812 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 STAG2Q8N3U4 1231 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 ZNF512BQ96KM6 892 aaPredicted RBP8.72□□□□□ -1.01
VMA21-201ENST00000330374 SCLT1Q96NL6 688 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 CEP89Q96ST8 783 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 RBM28Q9NW13 759 aaKnown RBP8.72□□□□□ -1.01
VMA21-201ENST00000330374 LAMB4A4D0S4 1761 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 GOLGA8HP0CJ92 632 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 FGFR2P21802 821 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 LONP1P36776 959 aaKnown RBP8.72□□□□□ -1.01
VMA21-201ENST00000330374 EHHADHQ08426 723 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 TRIM28Q13263 835 aaKnown RBP8.72□□□□□ -1.01
VMA21-201ENST00000330374 GIMAP7Q8NHV1 300 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 ZNF473Q8WTR7 871 aaKnown RBP8.72□□□□□ -1.01
VMA21-201ENST00000330374 NUP58Q9BVL2 599 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 TSGA10Q9BZW7 698 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 TTYH3Q9C0H2 523 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 ATP6V1AP38606 617 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 DZIP3Q86Y13 1208 aaKnown RBP8.72□□□□□ -1.01
VMA21-201ENST00000330374 PIGBQ92521 554 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 CCDC47Q96A33 483 aaKnown RBP8.72□□□□□ -1.01
VMA21-201ENST00000330374 CCDC114Q96M63 670 aa8.72□□□□□ -1.01
VMA21-201ENST00000330374 TCP1P17987 556 aaKnown RBP8.71□□□□□ -1.01
VMA21-201ENST00000330374 TECP42680 631 aa8.71□□□□□ -1.01
VMA21-201ENST00000330374 E2F5Q15329 346 aa8.71□□□□□ -1.01
VMA21-201ENST00000330374 EMBQ6PCB8 327 aa8.71□□□□□ -1.01
VMA21-201ENST00000330374 CABP7Q86V35 215 aa8.71□□□□□ -1.01
VMA21-201ENST00000330374 DDX42Q86XP3 938 aaKnown RBP eCLIP8.71□□□□□ -1.01
VMA21-201ENST00000330374 IFT20Q8IY31 132 aa8.71□□□□□ -1.01
VMA21-201ENST00000330374 GIMAP8Q8ND71 665 aaPredicted RBP8.71□□□□□ -1.01
VMA21-201ENST00000330374 CCT8L2Q96SF2 557 aa8.71□□□□□ -1.01
VMA21-201ENST00000330374 VAT1LQ9HCJ6 419 aa8.71□□□□□ -1.01
VMA21-201ENST00000330374 MROH5Q6ZUA9 1318 aa8.71□□□□□ -1.01
VMA21-201ENST00000330374 CCNE1P24864 410 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 TMOD1P28289 359 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 TXNRD1Q16881 649 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms