RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 PVALEFA0A1B0GWK0 134 aa16.28■□□□□ 0.2
TPM3-206ENST00000330188 ZSCAN20P17040 1043 aaPredicted RBP16.28■□□□□ 0.2
TPM3-206ENST00000330188 CENPPQ6IPU0 288 aa16.28■□□□□ 0.2
TPM3-206ENST00000330188 SNX29Q8TEQ0 813 aa16.28■□□□□ 0.2
TPM3-206ENST00000330188 RAD54LQ92698 747 aa16.28■□□□□ 0.2
TPM3-206ENST00000330188 TTYH3Q9C0H2 523 aa16.28■□□□□ 0.2
TPM3-206ENST00000330188 SLC39A2Q9NP94 309 aa16.28■□□□□ 0.2
TPM3-206ENST00000330188 MRPL12P52815 198 aaKnown RBP16.27■□□□□ 0.2
TPM3-206ENST00000330188 KRT79Q5XKE5 535 aa16.27■□□□□ 0.2
TPM3-206ENST00000330188 SLC35F6Q8N357 371 aa16.27■□□□□ 0.2
TPM3-206ENST00000330188 DDX25Q9UHL0 483 aaKnown RBP16.27■□□□□ 0.2
TPM3-206ENST00000330188 REXO2Q9Y3B8 237 aaKnown RBP16.27■□□□□ 0.2
TPM3-206ENST00000330188 RASSF10A6NK89 507 aa16.27■□□□□ 0.19
TPM3-206ENST00000330188 PLSCR1O15162 318 aa16.27■□□□□ 0.19
TPM3-206ENST00000330188 NDUFA10O95299 355 aa16.27■□□□□ 0.19
TPM3-206ENST00000330188 CACNB3P54284 484 aa16.27■□□□□ 0.19
TPM3-206ENST00000330188 MIIPQ5JXC2 388 aa16.27■□□□□ 0.19
TPM3-206ENST00000330188 WDR59Q6PJI9 974 aa16.27■□□□□ 0.19
TPM3-206ENST00000330188 KCNK18Q7Z418 384 aa16.27■□□□□ 0.19
TPM3-206ENST00000330188 KIAA0825Q8IV33 1275 aa16.27■□□□□ 0.19
TPM3-206ENST00000330188 KRT222Q8N1A0 295 aa16.27■□□□□ 0.19
TPM3-206ENST00000330188 PIAS4Q8N2W9 510 aaPredicted RBP16.27■□□□□ 0.19
TPM3-206ENST00000330188 HAS1Q92839 578 aa16.27■□□□□ 0.19
TPM3-206ENST00000330188 ZNF622Q969S3 477 aaKnown RBP eCLIP16.27■□□□□ 0.192e-8■■□□□ 13.1
TPM3-206ENST00000330188 MRIQ9BWK5 157 aa16.27■□□□□ 0.19
TPM3-206ENST00000330188 PSTPIP2Q9H939 334 aa16.27■□□□□ 0.19
TPM3-206ENST00000330188 ATF5Q9Y2D1 282 aaPredicted RBP16.27■□□□□ 0.19
TPM3-206ENST00000330188 EPN1Q9Y6I3 576 aaPredicted RBP16.27■□□□□ 0.19
TPM3-206ENST00000330188 DDTLA6NHG4 134 aaPredicted RBP16.26■□□□□ 0.19
TPM3-206ENST00000330188 FAM196BA6NMK8 535 aa16.26■□□□□ 0.19
TPM3-206ENST00000330188 MTIF2P46199 727 aaKnown RBP16.26■□□□□ 0.19
TPM3-206ENST00000330188 TBC1D8BQ0IIM8 1120 aa16.26■□□□□ 0.19
TPM3-206ENST00000330188 TCP10Q12799 353 aa16.26■□□□□ 0.19
TPM3-206ENST00000330188 ECM1Q16610 540 aa16.26■□□□□ 0.19
TPM3-206ENST00000330188 SHROOM1Q2M3G4 852 aaPredicted RBP16.26■□□□□ 0.19
TPM3-206ENST00000330188 TEX35Q5T0J7 233 aa16.26■□□□□ 0.19
TPM3-206ENST00000330188 DYMQ7RTS9 669 aa16.26■□□□□ 0.19
TPM3-206ENST00000330188 ZSCAN29Q8IWY8 852 aaPredicted RBP16.26■□□□□ 0.19
TPM3-206ENST00000330188 GPR161Q8N6U8 529 aaKnown RBP16.26■□□□□ 0.19
TPM3-206ENST00000330188 MKL1Q969V6 931 aa16.26■□□□□ 0.19
TPM3-206ENST00000330188 EPC1Q9H2F5 836 aa16.26■□□□□ 0.19
TPM3-206ENST00000330188 DHX36Q9H2U1 1008 aaKnown RBP16.26■□□□□ 0.19
TPM3-206ENST00000330188 ARGLU1Q9NWB6 273 aaPredicted RBP16.26■□□□□ 0.19
TPM3-206ENST00000330188 FAM198AQ9UFP1 575 aa16.26■□□□□ 0.19
TPM3-206ENST00000330188 NKRFO15226 690 aaKnown RBP eCLIP16.25■□□□□ 0.19
TPM3-206ENST00000330188 EEF2P13639 858 aaKnown RBP16.25■□□□□ 0.19
TPM3-206ENST00000330188 GCFC2P16383 781 aaKnown RBP16.25■□□□□ 0.19
TPM3-206ENST00000330188 KLK7P49862 253 aa16.25■□□□□ 0.19
TPM3-206ENST00000330188 FKBP1AP62942 108 aaKnown RBP16.25■□□□□ 0.19
TPM3-206ENST00000330188 MEA1Q16626 185 aa16.25■□□□□ 0.19
TPM3-206ENST00000330188 GOLGA1Q92805 767 aa16.25■□□□□ 0.19
TPM3-206ENST00000330188 NOC4LQ9BVI4 516 aaKnown RBP16.25■□□□□ 0.19
TPM3-206ENST00000330188 NUP58Q9BVL2 599 aa16.25■□□□□ 0.19
TPM3-206ENST00000330188 IDI2Q9BXS1 227 aa16.25■□□□□ 0.19
TPM3-206ENST00000330188 MYO1AQ9UBC5 1043 aa16.25■□□□□ 0.19
TPM3-206ENST00000330188 CDC23Q9UJX2 597 aa16.25■□□□□ 0.19
TPM3-206ENST00000330188 CTAGE9A4FU28 777 aa16.25■□□□□ 0.19
TPM3-206ENST00000330188 ZRANB2O95218 330 aaKnown RBP eCLIP16.25■□□□□ 0.19
TPM3-206ENST00000330188 EHHADHQ08426 723 aa16.25■□□□□ 0.19
TPM3-206ENST00000330188 BMS1Q14692 1282 aaKnown RBP16.25■□□□□ 0.19
TPM3-206ENST00000330188 QRICH1Q2TAL8 776 aa16.25■□□□□ 0.19
TPM3-206ENST00000330188 DACT2Q5SW24 774 aa16.25■□□□□ 0.19
TPM3-206ENST00000330188 STRIP1Q5VSL9 837 aa16.25■□□□□ 0.19
TPM3-206ENST00000330188 SH3BP5LQ7L8J4 393 aa16.25■□□□□ 0.19
TPM3-206ENST00000330188 RETREG2Q8NC44 543 aa16.25■□□□□ 0.19
TPM3-206ENST00000330188 FLAD1Q8NFF5 587 aa16.25■□□□□ 0.19
TPM3-206ENST00000330188 DCAF4Q8WV16 495 aa16.25■□□□□ 0.19
TPM3-206ENST00000330188 AGPAT5Q9NUQ2 364 aa16.25■□□□□ 0.19
TPM3-206ENST00000330188 NYAP2Q9P242 653 aa16.25■□□□□ 0.19
TPM3-206ENST00000330188 FHOD1Q9Y613 1164 aa16.25■□□□□ 0.19
TPM3-206ENST00000330188 SLX4Q8IY92 1834 aa16.25■□□□□ 0.19
TPM3-206ENST00000330188 ECE2O60344 883 aa16.24■□□□□ 0.19
TPM3-206ENST00000330188 HDLBPQ00341 1268 aaKnown RBP16.24■□□□□ 0.19
TPM3-206ENST00000330188 TUBB2AQ13885 445 aa16.24■□□□□ 0.19
TPM3-206ENST00000330188 TSR1Q2NL82 804 aaKnown RBP16.24■□□□□ 0.19
TPM3-206ENST00000330188 KIF4BQ2VIQ3 1234 aa16.24■□□□□ 0.19
TPM3-206ENST00000330188 CERKLQ49MI3 558 aaPredicted RBP16.24■□□□□ 0.19
TPM3-206ENST00000330188 MSL1Q68DK7 614 aa16.24■□□□□ 0.19
TPM3-206ENST00000330188 SRGAP1Q7Z6B7 1085 aa16.24■□□□□ 0.19
TPM3-206ENST00000330188 GUF1Q8N442 669 aaKnown RBP16.24■□□□□ 0.19
TPM3-206ENST00000330188 RABGGTAQ92696 567 aa16.24■□□□□ 0.19
TPM3-206ENST00000330188 DDX12PQ92771 950 aa16.24■□□□□ 0.19
TPM3-206ENST00000330188 GJA10Q969M2 543 aa16.24■□□□□ 0.19
TPM3-206ENST00000330188 ERGIC2Q96RQ1 377 aa16.24■□□□□ 0.19
TPM3-206ENST00000330188 TUBB2BQ9BVA1 445 aa16.24■□□□□ 0.19
TPM3-206ENST00000330188 TRIM21P19474 475 aaKnown RBP16.24■□□□□ 0.19
TPM3-206ENST00000330188 SLFN13Q68D06 897 aa16.24■□□□□ 0.19
TPM3-206ENST00000330188 C2CD5Q86YS7 1000 aa16.24■□□□□ 0.19
TPM3-206ENST00000330188 NAPGQ99747 312 aaPredicted RBP16.24■□□□□ 0.19
TPM3-206ENST00000330188 LRRC27Q9C0I9 530 aa16.24■□□□□ 0.19
TPM3-206ENST00000330188 KANSL2Q9H9L4 492 aa16.24■□□□□ 0.19
TPM3-206ENST00000330188 PI4KBQ9UBF8 816 aa16.24■□□□□ 0.19
TPM3-206ENST00000330188 USP17L15C9J2P7 530 aa16.23■□□□□ 0.19
TPM3-206ENST00000330188 USP17L13C9JLJ4 530 aa16.23■□□□□ 0.19
TPM3-206ENST00000330188 USP17L11C9JVI0 530 aa16.23■□□□□ 0.19
TPM3-206ENST00000330188 USP17L18D6R9N7 530 aa16.23■□□□□ 0.19
TPM3-206ENST00000330188 USP17L22D6RA61 530 aa16.23■□□□□ 0.19
TPM3-206ENST00000330188 USP17L17D6RBQ6 530 aa16.23■□□□□ 0.19
TPM3-206ENST00000330188 USP17L19D6RCP7 530 aa16.23■□□□□ 0.19
TPM3-206ENST00000330188 USP17L20D6RJB6 530 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms