RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 SMG5Q9UPR3 1016 aaKnown RBP2.59□□□□□ -2
CCDC144A-201ENST00000328495 AKT3Q9Y243 479 aa2.59□□□□□ -2
CCDC144A-201ENST00000328495 TMEM131LA2VDJ0 1609 aa2.59□□□□□ -2
CCDC144A-201ENST00000328495 C2orf71A6NGG8 1288 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 NUDT19A8MXV4 375 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 E9PSI1 815 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 RFXAPO00287 272 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 FGRP09769 529 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 SDHBP21912 280 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 VIPR1P32241 457 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 KIR3DS1Q14943 382 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 NR1I3Q14994 352 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 CABP7Q86V35 215 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 CILP2Q8IUL8 1156 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 PPP1R14AQ96A00 147 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 PDLIM7Q9NR12 457 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 R3HCC1Q9Y3T6 440 aaKnown RBP2.58□□□□□ -2
CCDC144A-201ENST00000328495 PLB1Q6P1J6 1458 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 EHBP1L1Q8N3D4 1523 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 NUAK1O60285 661 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 VAMP4O75379 141 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 CFPP27918 469 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 DNAJA1P31689 397 aaKnown RBP2.58□□□□□ -2
CCDC144A-201ENST00000328495 MVKQ03426 396 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 BVESQ8NE79 360 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 APEX2Q9UBZ4 518 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 MBD1Q9UIS9 605 aaPredicted RBP2.58□□□□□ -2
CCDC144A-201ENST00000328495 CNOT6Q9ULM6 557 aaKnown RBP2.58□□□□□ -2
CCDC144A-201ENST00000328495 SRGAP3O43295 1099 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 KCNH1O95259 989 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 PAMP19021 973 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 FXNQ16595 210 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 BICRALQ6AI39 1079 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 C6orf15Q6UXA7 325 aaPredicted RBP2.58□□□□□ -2
CCDC144A-201ENST00000328495 TMC6Q7Z403 805 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 FAM178BQ8IXR5 827 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 MCMBPQ9BTE3 642 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 GCM1Q9NP62 436 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 KLHL14Q9P2G3 628 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 EMC9Q9Y3B6 208 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 IRAK3Q9Y616 596 aa2.58□□□□□ -2
CCDC144A-201ENST00000328495 PRDM2Q13029 1718 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 DDAH1O94760 285 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 CYBBP04839 570 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 MSL3P1P0C860 447 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 MAPKAPK2P49137 400 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 PLEKHN1Q494U1 663 aaPredicted RBP2.57□□□□□ -2
CCDC144A-201ENST00000328495 ZNF385BQ569K4 471 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 ZC3H14Q6PJT7 736 aaKnown RBP2.57□□□□□ -2
CCDC144A-201ENST00000328495 RPTNQ6XPR3 784 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 C1QL4Q86Z23 238 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 ZNF513Q8N8E2 541 aaPredicted RBP2.57□□□□□ -2
CCDC144A-201ENST00000328495 SLC43A3Q8NBI5 491 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 SIGLEC10Q96LC7 697 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 SGPP1Q9BX95 441 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 NPHP3-ACAD11A0A0J9YXS1 232 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 N4BP3O15049 544 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 DBHP09172 617 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 TACR1P25103 407 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 ETFBP38117 255 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 CBX2Q14781 532 aaPredicted RBP2.57□□□□□ -2
CCDC144A-201ENST00000328495 PAQR3Q6TCH7 311 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 MCF2L2Q86YR7 1114 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 SIAH1Q8IUQ4 282 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 TRIM59Q8IWR1 403 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 NLGN2Q8NFZ4 835 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 CNTD2Q9H8S5 307 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 ZNF408Q9H9D4 720 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 LRP2BPQ9P2M1 347 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 DBR1Q9UK59 544 aaKnown RBP2.57□□□□□ -2
CCDC144A-201ENST00000328495 ARAP3Q8WWN8 1544 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 B2RBV5 119 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 SUSD5O60279 629 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 ZSCAN22P10073 491 aaPredicted RBP2.57□□□□□ -2
CCDC144A-201ENST00000328495 SCRN1Q12765 414 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 ACAP1Q15027 740 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 SV2CQ496J9 727 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 GTF2IRD2BQ6EKJ0 949 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 SPOCD1Q6ZMY3 1216 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 GTF2IRD2Q86UP8 949 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 TMEM151BQ8IW70 566 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 LZTR1Q8N653 840 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 MZB1Q8WU39 189 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 KCTD3Q9Y597 815 aa2.57□□□□□ -2
CCDC144A-201ENST00000328495 AGRPO00253 132 aa2.56□□□□□ -2
CCDC144A-201ENST00000328495 NPHS1O60500 1241 aa2.56□□□□□ -2
CCDC144A-201ENST00000328495 CDR1P51861 262 aa2.56□□□□□ -2
CCDC144A-201ENST00000328495 EEPD1Q7L9B9 569 aa2.56□□□□□ -2
CCDC144A-201ENST00000328495 EPN3Q9H201 632 aa2.56□□□□□ -2
CCDC144A-201ENST00000328495 NUDT5Q9UKK9 219 aa2.56□□□□□ -2
CCDC144A-201ENST00000328495 PFKLP17858 780 aa2.56□□□□□ -2
CCDC144A-201ENST00000328495 PI3P19957 117 aa2.56□□□□□ -2
CCDC144A-201ENST00000328495 EPHB3P54753 998 aa2.56□□□□□ -2
CCDC144A-201ENST00000328495 ZC3H6P61129 1189 aaKnown RBP2.56□□□□□ -2
CCDC144A-201ENST00000328495 CPNE8Q86YQ8 564 aa2.56□□□□□ -2
CCDC144A-201ENST00000328495 COPS5Q92905 334 aa2.56□□□□□ -2
CCDC144A-201ENST00000328495 MRGPRX3Q96LB0 322 aa2.56□□□□□ -2
CCDC144A-201ENST00000328495 GMLQ99445 158 aa2.56□□□□□ -2
CCDC144A-201ENST00000328495 KRTAP9-9Q9BYP9 154 aa2.56□□□□□ -2
CCDC144A-201ENST00000328495 KRTAP9-4Q9BYQ2 154 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms