RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 MB21D2Q8IYB1 491 aaPredicted RBP12.55□□□□□ -0.4
COL4A5-201ENST00000328300 GRK7Q8WTQ7 553 aa12.55□□□□□ -0.4
COL4A5-201ENST00000328300 THAP9Q9H5L6 903 aa12.55□□□□□ -0.4
COL4A5-201ENST00000328300 USP17L5A8MUK1 530 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 PDE6CP51160 858 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 MNAT1P51948 309 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 DIXDC1Q155Q3 683 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 SBK1Q52WX2 424 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 SLF1Q9BQI6 1058 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 STIM2Q9P246 746 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 RWDD2AQ9UIY3 292 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 KIAA1024Q9UPX6 916 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 RAD17O75943 681 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 CAPZA3Q96KX2 299 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 CALR3Q96L12 384 aaKnown RBP12.54□□□□□ -0.4
COL4A5-201ENST00000328300 PPP1R9BQ96SB3 815 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 DCP1AQ9NPI6 582 aaPredicted RBP12.54□□□□□ -0.4
COL4A5-201ENST00000328300 TBC1D7Q9P0N9 293 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 AMFRQ9UKV5 643 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 CD19P15391 556 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 SYNE4Q8N205 404 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 CELF1Q92879 486 aaKnown RBP12.54□□□□□ -0.4
COL4A5-201ENST00000328300 P2RX5Q93086 422 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 ANO3Q9BYT9 981 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 RAB17Q9H0T7 212 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 HADHQ16836 314 aaKnown RBP12.54□□□□□ -0.4
COL4A5-201ENST00000328300 PI16Q6UXB8 463 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 RRAGAQ7L523 313 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 CMTR1Q8N1G2 835 aaKnown RBP12.54□□□□□ -0.4
COL4A5-201ENST00000328300 SH3RF3Q8TEJ3 882 aaPredicted RBP12.54□□□□□ -0.4
COL4A5-201ENST00000328300 RNF34Q969K3 372 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 LCMT1Q9UIC8 334 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 TMEM191BP0C7N4 346 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 PAK2Q13177 524 aa12.54□□□□□ -0.4
COL4A5-201ENST00000328300 CACTINQ8WUQ7 758 aaKnown RBP12.54□□□□□ -0.4
COL4A5-201ENST00000328300 MST1RQ04912 1400 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 GDF11O95390 407 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 LMNB1P20700 586 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 STRIP1Q5VSL9 837 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 PEX26Q7Z412 305 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 FAM20AQ96MK3 541 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 MXD3Q9BW11 206 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 KDM6AO15550 1401 aaPredicted RBP12.53□□□□□ -0.4
COL4A5-201ENST00000328300 GOLGA6CA6NDK9 693 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 GOLGA6BA6NDN3 693 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 GOLGA6DP0CG33 693 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 LGSNQ5TDP6 509 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 TCP11Q8WWU5 503 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 TBC1D22BQ9NU19 505 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 RNF216Q9NWF9 866 aaPredicted RBP12.53□□□□□ -0.4
COL4A5-201ENST00000328300 GOLGA6AQ9NYA3 693 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 EIF3CLB5ME19 914 aaKnown RBP12.53□□□□□ -0.4
COL4A5-201ENST00000328300 KRT19P08727 400 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 LRRC63Q05C16 580 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 C10orf76Q5T2E6 689 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 KCTD1Q719H9 257 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 NEDD1Q8NHV4 660 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 GTF3C2Q8WUA4 911 aaPredicted RBP12.53□□□□□ -0.4
COL4A5-201ENST00000328300 HAUS1Q96CS2 278 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 EIF3CQ99613 913 aaKnown RBP12.53□□□□□ -0.4
COL4A5-201ENST00000328300 HESX1Q9UBX0 185 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 ENTPD3O75355 529 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 GTF2A1P52655 376 aaPredicted RBP12.53□□□□□ -0.4
COL4A5-201ENST00000328300 COPB1P53618 953 aaKnown RBP12.53□□□□□ -0.4
COL4A5-201ENST00000328300 EVCP57679 992 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 MAN2A1Q16706 1144 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 ENOX1Q8TC92 643 aaKnown RBP12.53□□□□□ -0.4
COL4A5-201ENST00000328300 PPM1EQ8WY54 764 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 DAPK3O43293 454 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 CYP2J2P51589 502 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 GPSM2P81274 684 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 FKBP3Q00688 224 aaKnown RBP12.53□□□□□ -0.4
COL4A5-201ENST00000328300 RUFY4Q6ZNE9 571 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 MAEAQ7L5Y9 396 aa12.53□□□□□ -0.4
COL4A5-201ENST00000328300 IQCA1LA6NCM1 817 aa12.52□□□□□ -0.4
COL4A5-201ENST00000328300 C21orf2O43822 256 aa12.52□□□□□ -0.4
COL4A5-201ENST00000328300 METTL13Q8N6R0 699 aa12.52□□□□□ -0.4
COL4A5-201ENST00000328300 BBOF1Q8ND07 529 aa12.52□□□□□ -0.4
COL4A5-201ENST00000328300 PLCB1Q9NQ66 1216 aa12.52□□□□□ -0.4
COL4A5-201ENST00000328300 E7EVH7 732 aa12.52□□□□□ -0.4
COL4A5-201ENST00000328300 SLFN12LQ6IEE8 588 aa12.52□□□□□ -0.4
COL4A5-201ENST00000328300 HHIPL2Q6UWX4 724 aa12.52□□□□□ -0.4
COL4A5-201ENST00000328300 OTUD6BQ8N6M0 293 aa12.52□□□□□ -0.4
COL4A5-201ENST00000328300 TCP1P17987 556 aaKnown RBP12.52□□□□□ -0.41
COL4A5-201ENST00000328300 ATG9AQ7Z3C6 839 aa12.52□□□□□ -0.41
COL4A5-201ENST00000328300 C2orf69Q8N8R5 385 aa12.52□□□□□ -0.41
COL4A5-201ENST00000328300 FAM84BQ96KN1 310 aaPredicted RBP12.52□□□□□ -0.41
COL4A5-201ENST00000328300 HYOU1Q9Y4L1 999 aa12.52□□□□□ -0.41
COL4A5-201ENST00000328300 MAN1A1P33908 653 aa12.52□□□□□ -0.41
COL4A5-201ENST00000328300 TKFCQ3LXA3 575 aa12.52□□□□□ -0.41
COL4A5-201ENST00000328300 NBPF11Q86T75 865 aa12.52□□□□□ -0.41
COL4A5-201ENST00000328300 NT5C1BQ96P26 610 aa12.52□□□□□ -0.41
COL4A5-201ENST00000328300 CCNE1P24864 410 aa12.52□□□□□ -0.41
COL4A5-201ENST00000328300 NKIRAS1Q9NYS0 192 aa12.52□□□□□ -0.41
COL4A5-201ENST00000328300 KIF1AQ12756 1690 aa12.52□□□□□ -0.41
COL4A5-201ENST00000328300 SFNP31947 248 aa12.51□□□□□ -0.41
COL4A5-201ENST00000328300 FAM182BQ5T319 152 aa12.51□□□□□ -0.41
COL4A5-201ENST00000328300 SLC10A4Q96EP9 437 aa12.51□□□□□ -0.41
COL4A5-201ENST00000328300 DYNLL2Q96FJ2 89 aa12.51□□□□□ -0.41
COL4A5-201ENST00000328300 MYL7Q01449 175 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms