RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 MYMKA6NI61 221 aa23.95■■□□□ 1.42
LIMS2-201ENST00000324938 EEF2P13639 858 aaKnown RBP23.95■■□□□ 1.42
LIMS2-201ENST00000324938 CERKLQ49MI3 558 aaPredicted RBP23.95■■□□□ 1.42
LIMS2-201ENST00000324938 KRT79Q5XKE5 535 aa23.95■■□□□ 1.42
LIMS2-201ENST00000324938 SNX29Q8TEQ0 813 aa23.95■■□□□ 1.42
LIMS2-201ENST00000324938 UBXN4Q92575 508 aa23.95■■□□□ 1.42
LIMS2-201ENST00000324938 OGFRQ9NZT2 677 aa23.95■■□□□ 1.42
LIMS2-201ENST00000324938 TTC26A0AVF1 554 aa23.94■■□□□ 1.42
LIMS2-201ENST00000324938 H0YIN7 160 aa23.94■■□□□ 1.42
LIMS2-201ENST00000324938 KIF5CO60282 957 aa23.94■■□□□ 1.42
LIMS2-201ENST00000324938 CBX1P83916 185 aa23.94■■□□□ 1.42
LIMS2-201ENST00000324938 TATDN1Q6P1N9 297 aa23.94■■□□□ 1.42
LIMS2-201ENST00000324938 SH3BP5LQ7L8J4 393 aa23.94■■□□□ 1.42
LIMS2-201ENST00000324938 CNOT6LQ96LI5 555 aaKnown RBP23.94■■□□□ 1.42
LIMS2-201ENST00000324938 DNAJC7Q99615 494 aa23.94■■□□□ 1.42
LIMS2-201ENST00000324938 NAP1L4Q99733 375 aaKnown RBP23.94■■□□□ 1.42
LIMS2-201ENST00000324938 IRX2Q9BZI1 471 aaPredicted RBP23.94■■□□□ 1.42
LIMS2-201ENST00000324938 A0A0U1RQJ8 604 aa23.93■■□□□ 1.42
LIMS2-201ENST00000324938 SPDYE4A6NLX3 237 aa23.93■■□□□ 1.42
LIMS2-201ENST00000324938 FAM196BA6NMK8 535 aa23.93■■□□□ 1.42
LIMS2-201ENST00000324938 HOXA7P31268 230 aaPredicted RBP23.93■■□□□ 1.42
LIMS2-201ENST00000324938 ARHGAP29Q52LW3 1261 aa23.93■■□□□ 1.42
LIMS2-201ENST00000324938 ACRBPQ8NEB7 543 aa23.93■■□□□ 1.42
LIMS2-201ENST00000324938 ATRIPQ8WXE1 791 aa23.93■■□□□ 1.42
LIMS2-201ENST00000324938 HAS1Q92839 578 aa23.93■■□□□ 1.42
LIMS2-201ENST00000324938 SERPINA10Q9UK55 444 aa23.93■■□□□ 1.42
LIMS2-201ENST00000324938 CAPN11Q9UMQ6 739 aa23.93■■□□□ 1.42
LIMS2-201ENST00000324938 PRKCSHP14314 528 aaPredicted RBP23.93■■□□□ 1.42
LIMS2-201ENST00000324938 RBM5P52756 815 aaKnown RBP eCLIP23.93■■□□□ 1.42
LIMS2-201ENST00000324938 QRICH1Q2TAL8 776 aa23.93■■□□□ 1.42
LIMS2-201ENST00000324938 OR8K1Q8NGG5 319 aa23.93■■□□□ 1.42
LIMS2-201ENST00000324938 NUDT12Q9BQG2 462 aa23.93■■□□□ 1.42
LIMS2-201ENST00000324938 LRRC27Q9C0I9 530 aa23.93■■□□□ 1.42
LIMS2-201ENST00000324938 LUC7L2Q9Y383 392 aaKnown RBP23.93■■□□□ 1.42
LIMS2-201ENST00000324938 B4DLN1 442 aa23.92■■□□□ 1.42
LIMS2-201ENST00000324938 PES1O00541 588 aaKnown RBP23.92■■□□□ 1.42
LIMS2-201ENST00000324938 SLC1A4P43007 532 aa23.92■■□□□ 1.42
LIMS2-201ENST00000324938 SHROOM1Q2M3G4 852 aaPredicted RBP23.92■■□□□ 1.42
LIMS2-201ENST00000324938 SLFN13Q68D06 897 aa23.92■■□□□ 1.42
LIMS2-201ENST00000324938 CENPPQ6IPU0 288 aa23.92■■□□□ 1.42
LIMS2-201ENST00000324938 PPP2R3AQ06190 1150 aa23.92■■□□□ 1.42
LIMS2-201ENST00000324938 HPS3Q969F9 1004 aa23.92■■□□□ 1.42
LIMS2-201ENST00000324938 SEMA6BQ9H3T3 888 aa23.92■■□□□ 1.42
LIMS2-201ENST00000324938 SLC39A2Q9NP94 309 aa23.92■■□□□ 1.42
LIMS2-201ENST00000324938 TMEM179Q6ZVK1 233 aa23.91■■□□□ 1.42
LIMS2-201ENST00000324938 ZSCAN29Q8IWY8 852 aaPredicted RBP23.91■■□□□ 1.42
LIMS2-201ENST00000324938 TRIM34Q9BYJ4 488 aa23.91■■□□□ 1.42
LIMS2-201ENST00000324938 TTYH3Q9C0H2 523 aa23.91■■□□□ 1.42
LIMS2-201ENST00000324938 CDC37Q16543 378 aaPredicted RBP23.9■■□□□ 1.42
LIMS2-201ENST00000324938 KCNK18Q7Z418 384 aa23.9■■□□□ 1.42
LIMS2-201ENST00000324938 RETREG2Q8NC44 543 aa23.9■■□□□ 1.42
LIMS2-201ENST00000324938 NUP58Q9BVL2 599 aa23.9■■□□□ 1.42
LIMS2-201ENST00000324938 ATRNL1Q5VV63 1379 aa23.9■■□□□ 1.42
LIMS2-201ENST00000324938 COL2A1P02458 1487 aaPredicted RBP23.9■■□□□ 1.42
LIMS2-201ENST00000324938 ICA1Q05084 483 aa23.9■■□□□ 1.42
LIMS2-201ENST00000324938 EHHADHQ08426 723 aa23.9■■□□□ 1.42
LIMS2-201ENST00000324938 SEPT2Q15019 361 aa23.9■■□□□ 1.42
LIMS2-201ENST00000324938 SIAH1Q8IUQ4 282 aa23.9■■□□□ 1.42
LIMS2-201ENST00000324938 GUF1Q8N442 669 aaKnown RBP23.9■■□□□ 1.42
LIMS2-201ENST00000324938 PCDHA1Q9Y5I3 950 aa23.9■■□□□ 1.42
LIMS2-201ENST00000324938 MTIF2P46199 727 aaKnown RBP23.89■■□□□ 1.42
LIMS2-201ENST00000324938 MIIPQ5JXC2 388 aa23.89■■□□□ 1.42
LIMS2-201ENST00000324938 HYIQ5T013 277 aa23.89■■□□□ 1.42
LIMS2-201ENST00000324938 DYMQ7RTS9 669 aa23.89■■□□□ 1.42
LIMS2-201ENST00000324938 SMAP1Q8IYB5 467 aaPredicted RBP23.89■■□□□ 1.42
LIMS2-201ENST00000324938 CHP1Q99653 195 aa23.89■■□□□ 1.42
LIMS2-201ENST00000324938 ARHGAP25P42331 645 aa23.89■■□□□ 1.41
LIMS2-201ENST00000324938 TBC1D8BQ0IIM8 1120 aa23.89■■□□□ 1.41
LIMS2-201ENST00000324938 PSMD2Q13200 908 aa23.89■■□□□ 1.41
LIMS2-201ENST00000324938 CNKSR1Q969H4 720 aa23.89■■□□□ 1.41
LIMS2-201ENST00000324938 MYO1AQ9UBC5 1043 aa23.89■■□□□ 1.41
LIMS2-201ENST00000324938 PCDHA12Q9UN75 941 aa23.89■■□□□ 1.41
LIMS2-201ENST00000324938 EPN1Q9Y6I3 576 aaPredicted RBP23.89■■□□□ 1.41
LIMS2-201ENST00000324938 KDM3AQ9Y4C1 1321 aa23.89■■□□□ 1.41
LIMS2-201ENST00000324938 USP17L15C9J2P7 530 aa23.88■■□□□ 1.41
LIMS2-201ENST00000324938 USP17L13C9JLJ4 530 aa23.88■■□□□ 1.41
LIMS2-201ENST00000324938 USP17L11C9JVI0 530 aa23.88■■□□□ 1.41
LIMS2-201ENST00000324938 USP17L18D6R9N7 530 aa23.88■■□□□ 1.41
LIMS2-201ENST00000324938 USP17L22D6RA61 530 aa23.88■■□□□ 1.41
LIMS2-201ENST00000324938 USP17L17D6RBQ6 530 aa23.88■■□□□ 1.41
LIMS2-201ENST00000324938 USP17L19D6RCP7 530 aa23.88■■□□□ 1.41
LIMS2-201ENST00000324938 USP17L20D6RJB6 530 aa23.88■■□□□ 1.41
LIMS2-201ENST00000324938 RAD21O60216 631 aa23.88■■□□□ 1.41
LIMS2-201ENST00000324938 NDUFA10O95299 355 aa23.88■■□□□ 1.41
LIMS2-201ENST00000324938 USP11P51784 963 aa23.88■■□□□ 1.41
LIMS2-201ENST00000324938 USP17L24Q0WX57 530 aa23.88■■□□□ 1.41
LIMS2-201ENST00000324938 ECM1Q16610 540 aa23.88■■□□□ 1.41
LIMS2-201ENST00000324938 MEA1Q16626 185 aa23.88■■□□□ 1.41
LIMS2-201ENST00000324938 ZNF569Q5MCW4 686 aa23.88■■□□□ 1.41
LIMS2-201ENST00000324938 ZNF772Q68DY9 489 aaPredicted RBP23.88■■□□□ 1.41
LIMS2-201ENST00000324938 USP17L6PQ6QN14 398 aa23.88■■□□□ 1.41
LIMS2-201ENST00000324938 GMCL1P1Q8NEA9 526 aa23.88■■□□□ 1.41
LIMS2-201ENST00000324938 DDX12PQ92771 950 aa23.88■■□□□ 1.41
LIMS2-201ENST00000324938 ERGIC2Q96RQ1 377 aa23.88■■□□□ 1.41
LIMS2-201ENST00000324938 SLF1Q9BQI6 1058 aa23.88■■□□□ 1.41
LIMS2-201ENST00000324938 NOC4LQ9BVI4 516 aaKnown RBP23.88■■□□□ 1.41
LIMS2-201ENST00000324938 ANO3Q9BYT9 981 aa23.88■■□□□ 1.41
LIMS2-201ENST00000324938 CLCN6P51797 869 aa23.87■■□□□ 1.41
LIMS2-201ENST00000324938 AOC3Q16853 763 aa23.87■■□□□ 1.41
LIMS2-201ENST00000324938 WDR59Q6PJI9 974 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms